RNA–Protein interactions for RNA: ENST00000463914.1

TMEM54-203, Transcript of transmembrane protein 54, humanhuman

TSL 5

Gene TMEM54, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-203ENST00000463914 ALDH1B1P30837 517 aa13.57□□□□□ -0.24
TMEM54-203ENST00000463914 C3orf67Q6ZVT6 689 aa13.57□□□□□ -0.24
TMEM54-203ENST00000463914 RPGRQ92834 1020 aaKnown RBP13.57□□□□□ -0.24
TMEM54-203ENST00000463914 PLEKHF1Q96S99 279 aa13.57□□□□□ -0.24
TMEM54-203ENST00000463914 NYXQ9GZU5 481 aa13.57□□□□□ -0.24
TMEM54-203ENST00000463914 LAMB2P55268 1798 aa13.57□□□□□ -0.24
TMEM54-203ENST00000463914 ANKRD36CQ5JPF3 1778 aa13.56□□□□□ -0.24
TMEM54-203ENST00000463914 NFE2L2Q16236 605 aa13.56□□□□□ -0.24
TMEM54-203ENST00000463914 SUSD4Q5VX71 490 aa13.56□□□□□ -0.24
TMEM54-203ENST00000463914 KIF6Q6ZMV9 814 aa13.56□□□□□ -0.24
TMEM54-203ENST00000463914 GPC2Q8N158 579 aa13.56□□□□□ -0.24
TMEM54-203ENST00000463914 PNISRQ8TF01 805 aaKnown RBP13.56□□□□□ -0.24
TMEM54-203ENST00000463914 PSMD1Q99460 953 aa13.56□□□□□ -0.24
TMEM54-203ENST00000463914 GJA3Q9Y6H8 435 aa13.56□□□□□ -0.24
TMEM54-203ENST00000463914 THSD7BQ9C0I4 1608 aa13.55□□□□□ -0.24
TMEM54-203ENST00000463914 TCERG1O14776 1098 aaKnown RBP13.55□□□□□ -0.24
TMEM54-203ENST00000463914 NTSR2O95665 410 aa13.55□□□□□ -0.24
TMEM54-203ENST00000463914 NEFMP07197 916 aa13.55□□□□□ -0.24
TMEM54-203ENST00000463914 PNMA8AQ86V59 439 aaPredicted RBP13.55□□□□□ -0.24
TMEM54-203ENST00000463914 CNTROBQ8N137 903 aa13.55□□□□□ -0.24
TMEM54-203ENST00000463914 JDP2Q8WYK2 163 aa13.55□□□□□ -0.24
TMEM54-203ENST00000463914 TRPM7Q96QT4 1865 aa13.55□□□□□ -0.24
TMEM54-203ENST00000463914 PPEF1O14829 653 aaPredicted RBP13.54□□□□□ -0.24
TMEM54-203ENST00000463914 HOXA10P31260 410 aaPredicted RBP13.54□□□□□ -0.24
TMEM54-203ENST00000463914 SCNN1DP51172 638 aa13.54□□□□□ -0.24
TMEM54-203ENST00000463914 CC2D2BQ6DHV5 1058 aa13.54□□□□□ -0.24
TMEM54-203ENST00000463914 ZNF34Q8IZ26 560 aa13.54□□□□□ -0.24
TMEM54-203ENST00000463914 RASSF10A6NK89 507 aa13.53□□□□□ -0.24
TMEM54-203ENST00000463914 CTCFP49711 727 aaPredicted RBP13.53□□□□□ -0.24
TMEM54-203ENST00000463914 EIF6P56537 245 aaKnown RBP13.53□□□□□ -0.24
TMEM54-203ENST00000463914 FMR1Q06787 632 aaKnown RBP eCLIP13.53□□□□□ -0.24
TMEM54-203ENST00000463914 LARGE2Q8N3Y3 721 aa13.53□□□□□ -0.24
TMEM54-203ENST00000463914 AIDAQ96BJ3 306 aa13.53□□□□□ -0.24
TMEM54-203ENST00000463914 PRDM10Q9NQV6 1147 aa13.53□□□□□ -0.24
TMEM54-203ENST00000463914 MAPK8IP3Q9UPT6 1336 aa13.53□□□□□ -0.24
TMEM54-203ENST00000463914 ANXA1P04083 346 aa13.52□□□□□ -0.25
TMEM54-203ENST00000463914 LMOD1P29536 600 aaPredicted RBP13.52□□□□□ -0.25
TMEM54-203ENST00000463914 EPS15P42566 896 aa13.52□□□□□ -0.25
TMEM54-203ENST00000463914 PROSER3Q2NL68 480 aa13.52□□□□□ -0.25
TMEM54-203ENST00000463914 GIGYF2Q6Y7W6 1299 aaKnown RBP13.52□□□□□ -0.25
TMEM54-203ENST00000463914 LRP10Q7Z4F1 713 aa13.52□□□□□ -0.25
TMEM54-203ENST00000463914 RBM17Q96I25 401 aaKnown RBP13.52□□□□□ -0.25
TMEM54-203ENST00000463914 CRAMP1Q96RY5 1269 aa13.52□□□□□ -0.25
TMEM54-203ENST00000463914 WBP1LQ9NX94 342 aa13.52□□□□□ -0.25
TMEM54-203ENST00000463914 ABT1Q9ULW3 272 aaKnown RBP13.52□□□□□ -0.25
TMEM54-203ENST00000463914 ERBB4Q15303 1308 aa13.52□□□□□ -0.25
TMEM54-203ENST00000463914 TAF1P21675 1872 aa13.52□□□□□ -0.25
TMEM54-203ENST00000463914 PPIP5K2O43314 1243 aa13.51□□□□□ -0.25
TMEM54-203ENST00000463914 LBX1P52954 281 aa13.51□□□□□ -0.25
TMEM54-203ENST00000463914 NIM1KQ8IY84 436 aa13.51□□□□□ -0.25
TMEM54-203ENST00000463914 TSPYL4Q9UJ04 414 aa13.51□□□□□ -0.25
TMEM54-203ENST00000463914 ABCC4O15439 1325 aa13.5□□□□□ -0.25
TMEM54-203ENST00000463914 TRAF5O00463 557 aa13.5□□□□□ -0.25
TMEM54-203ENST00000463914 HSPA8P11142 646 aaKnown RBP13.5□□□□□ -0.25
TMEM54-203ENST00000463914 PDIA6Q15084 440 aa13.5□□□□□ -0.25
TMEM54-203ENST00000463914 AOC3Q16853 763 aa13.5□□□□□ -0.25
TMEM54-203ENST00000463914 DEFB115Q30KQ5 88 aa13.5□□□□□ -0.25
TMEM54-203ENST00000463914 DDX21Q9NR30 783 aaKnown RBP eCLIP13.5□□□□□ -0.25
TMEM54-203ENST00000463914 DUOX1Q9NRD9 1551 aa13.49□□□□□ -0.25
TMEM54-203ENST00000463914 WDR33Q9C0J8 1336 aaKnown RBP13.49□□□□□ -0.25
TMEM54-203ENST00000463914 EIF2S2P20042 333 aaKnown RBP13.49□□□□□ -0.25
TMEM54-203ENST00000463914 PARP10Q53GL7 1025 aa13.49□□□□□ -0.25
TMEM54-203ENST00000463914 PPP1R42Q7Z4L9 355 aa13.49□□□□□ -0.25
TMEM54-203ENST00000463914 LRRC37AA6NMS7 1700 aa13.48□□□□□ -0.25
TMEM54-203ENST00000463914 DDX60Q8IY21 1712 aaKnown RBP13.48□□□□□ -0.25
TMEM54-203ENST00000463914 GRIPAP1Q4V328 841 aa13.48□□□□□ -0.25
TMEM54-203ENST00000463914 PAXIP1Q6ZW49 1069 aaPredicted RBP13.48□□□□□ -0.25
TMEM54-203ENST00000463914 CAPNS2Q96L46 248 aa13.48□□□□□ -0.25
TMEM54-203ENST00000463914 NLRP3Q96P20 1036 aa13.48□□□□□ -0.25
TMEM54-203ENST00000463914 UTP14AQ9BVJ6 771 aaKnown RBP13.48□□□□□ -0.25
TMEM54-203ENST00000463914 ATP6V0A2Q9Y487 856 aa13.48□□□□□ -0.25
TMEM54-203ENST00000463914 GRM1Q13255 1194 aa13.47□□□□□ -0.25
TMEM54-203ENST00000463914 NECTIN2Q92692 538 aa13.47□□□□□ -0.25
TMEM54-203ENST00000463914 GPRC5DQ9NZD1 345 aa13.47□□□□□ -0.25
TMEM54-203ENST00000463914 HCLS1P14317 486 aaPredicted RBP13.46□□□□□ -0.25
TMEM54-203ENST00000463914 RIPK4P57078 832 aa13.46□□□□□ -0.25
TMEM54-203ENST00000463914 CXCL9Q07325 125 aa13.46□□□□□ -0.25
TMEM54-203ENST00000463914 KRT24Q2M2I5 525 aa13.46□□□□□ -0.25
TMEM54-203ENST00000463914 SLC10A5Q5PT55 438 aa13.46□□□□□ -0.25
TMEM54-203ENST00000463914 CST9Q5W186 159 aa13.46□□□□□ -0.25
TMEM54-203ENST00000463914 CYP4F22Q6NT55 531 aa13.46□□□□□ -0.25
TMEM54-203ENST00000463914 USP50Q70EL3 339 aaPredicted RBP13.46□□□□□ -0.25
TMEM54-203ENST00000463914 XAGE3Q8WTP9 111 aa13.46□□□□□ -0.25
TMEM54-203ENST00000463914 ZNF428Q96B54 188 aa13.46□□□□□ -0.25
TMEM54-203ENST00000463914 COL4A1P02462 1669 aa13.46□□□□□ -0.26
TMEM54-203ENST00000463914 GMPSP49915 693 aaPredicted RBP13.45□□□□□ -0.26
TMEM54-203ENST00000463914 MAP2K1Q02750 393 aaPredicted RBP13.45□□□□□ -0.26
TMEM54-203ENST00000463914 AIMP1Q12904 312 aaKnown RBP13.45□□□□□ -0.26
TMEM54-203ENST00000463914 NLRP10Q86W26 655 aa13.45□□□□□ -0.26
TMEM54-203ENST00000463914 PNNQ9H307 717 aaKnown RBP13.45□□□□□ -0.26
TMEM54-203ENST00000463914 ADARB2Q9NS39 739 aaKnown RBP13.45□□□□□ -0.26
TMEM54-203ENST00000463914 ZNRF3Q9ULT6 936 aa13.45□□□□□ -0.26
TMEM54-203ENST00000463914 TMPOP42166 694 aaKnown RBP13.44□□□□□ -0.26
TMEM54-203ENST00000463914 DPP8Q6V1X1 898 aaPredicted RBP13.44□□□□□ -0.26
TMEM54-203ENST00000463914 COPS6Q7L5N1 327 aa13.44□□□□□ -0.26
TMEM54-203ENST00000463914 SUPT20HQ8NEM7 779 aa13.44□□□□□ -0.26
TMEM54-203ENST00000463914 RTFDC1Q9BY42 306 aaPredicted RBP13.44□□□□□ -0.26
TMEM54-203ENST00000463914 TMX4Q9H1E5 349 aaPredicted RBP13.44□□□□□ -0.26
TMEM54-203ENST00000463914 SH3TC1Q8TE82 1336 aa13.43□□□□□ -0.26
TMEM54-203ENST00000463914 SHTN1A0MZ66 631 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms