RNA–Protein interactions for RNA: ENST00000463601.1

TSC2-209, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-209ENST00000463601 SMC1BQ8NDV3 1235 aa25.18■■□□□ 1.62
TSC2-209ENST00000463601 ANKRD36CQ5JPF3 1778 aa25.18■■□□□ 1.62
TSC2-209ENST00000463601 FKBP4Q02790 459 aaKnown RBP eCLIP25.17■■□□□ 1.62
TSC2-209ENST00000463601 COPS6Q7L5N1 327 aa25.17■■□□□ 1.62
TSC2-209ENST00000463601 XAGE3Q8WTP9 111 aa25.17■■□□□ 1.62
TSC2-209ENST00000463601 MRS2Q9HD23 443 aa25.17■■□□□ 1.62
TSC2-209ENST00000463601 AIMP1Q12904 312 aaKnown RBP25.16■■□□□ 1.62
TSC2-209ENST00000463601 RIC1Q4ADV7 1423 aa25.16■■□□□ 1.62
TSC2-209ENST00000463601 SNED1Q8TER0 1413 aa25.15■■□□□ 1.62
TSC2-209ENST00000463601 RTKN2Q8IZC4 609 aa25.15■■□□□ 1.62
TSC2-209ENST00000463601 HOXA10P31260 410 aaPredicted RBP25.14■■□□□ 1.62
TSC2-209ENST00000463601 RPGRQ92834 1020 aaKnown RBP25.14■■□□□ 1.62
TSC2-209ENST00000463601 PARP10Q53GL7 1025 aa25.13■■□□□ 1.61
TSC2-209ENST00000463601 PPP1R42Q7Z4L9 355 aa25.13■■□□□ 1.61
TSC2-209ENST00000463601 SYNE4Q8N205 404 aa25.13■■□□□ 1.61
TSC2-209ENST00000463601 DDX21Q9NR30 783 aaKnown RBP eCLIP25.13■■□□□ 1.61
TSC2-209ENST00000463601 CHPF2Q9P2E5 772 aa25.13■■□□□ 1.61
TSC2-209ENST00000463601 ZNF541Q9H0D2 1346 aa25.12■■□□□ 1.61
TSC2-209ENST00000463601 UTP14AQ9BVJ6 771 aaKnown RBP25.12■■□□□ 1.61
TSC2-209ENST00000463601 LAMB2P55268 1798 aa25.12■■□□□ 1.61
TSC2-209ENST00000463601 APAF1O14727 1248 aa25.11■■□□□ 1.61
TSC2-209ENST00000463601 TCERG1O14776 1098 aaKnown RBP25.11■■□□□ 1.61
TSC2-209ENST00000463601 ZNF428Q96B54 188 aa25.11■■□□□ 1.61
TSC2-209ENST00000463601 POTEIP0CG38 1075 aa25.1■■□□□ 1.61
TSC2-209ENST00000463601 POTEJP0CG39 1038 aa25.1■■□□□ 1.61
TSC2-209ENST00000463601 RBM17Q96I25 401 aaKnown RBP25.1■■□□□ 1.61
TSC2-209ENST00000463601 CFAP44Q96MT7 982 aa25.1■■□□□ 1.61
TSC2-209ENST00000463601 IARSP41252 1262 aaKnown RBP25.09■■□□□ 1.61
TSC2-209ENST00000463601 SLC10A5Q5PT55 438 aa25.09■■□□□ 1.61
TSC2-209ENST00000463601 HDGFL1Q5TGJ6 251 aa25.09■■□□□ 1.61
TSC2-209ENST00000463601 NLRP10Q86W26 655 aa25.09■■□□□ 1.61
TSC2-209ENST00000463601 CRAMP1Q96RY5 1269 aa25.09■■□□□ 1.61
TSC2-209ENST00000463601 MBIPQ9NS73 344 aa25.09■■□□□ 1.61
TSC2-209ENST00000463601 COL4A5P29400 1685 aa25.09■■□□□ 1.61
TSC2-209ENST00000463601 PCNTO95613 3336 aa25.08■■□□□ 1.61
TSC2-209ENST00000463601 SCN4AP35499 1836 aa25.08■■□□□ 1.61
TSC2-209ENST00000463601 TCIRG1Q13488 830 aa25.08■■□□□ 1.61
TSC2-209ENST00000463601 NLRP3Q96P20 1036 aa25.08■■□□□ 1.61
TSC2-209ENST00000463601 HSP90AB3PQ58FF7 597 aa25.07■■□□□ 1.6
TSC2-209ENST00000463601 DUSP27Q5VZP5 1158 aa25.07■■□□□ 1.6
TSC2-209ENST00000463601 KLRG1Q96E93 195 aa25.07■■□□□ 1.6
TSC2-209ENST00000463601 PSMD1Q99460 953 aa25.07■■□□□ 1.6
TSC2-209ENST00000463601 TAF1P21675 1872 aa25.06■■□□□ 1.6
TSC2-209ENST00000463601 PPEF1O14829 653 aaPredicted RBP25.06■■□□□ 1.6
TSC2-209ENST00000463601 ZNF853P0CG23 659 aa25.06■■□□□ 1.6
TSC2-209ENST00000463601 HCLS1P14317 486 aaPredicted RBP25.06■■□□□ 1.6
TSC2-209ENST00000463601 L3MBTL3Q96JM7 780 aaPredicted RBP25.06■■□□□ 1.6
TSC2-209ENST00000463601 HOXB7P09629 217 aa25.05■■□□□ 1.6
TSC2-209ENST00000463601 CC2D2BQ6DHV5 1058 aa25.05■■□□□ 1.6
TSC2-209ENST00000463601 FZD9O00144 591 aa25.04■■□□□ 1.6
TSC2-209ENST00000463601 TRMT112Q9UI30 125 aaKnown RBP25.04■■□□□ 1.6
TSC2-209ENST00000463601 ABCC4O15439 1325 aa25.04■■□□□ 1.6
TSC2-209ENST00000463601 CHADLQ6NUI6 762 aa25.03■■□□□ 1.6
TSC2-209ENST00000463601 TAF1DQ9H5J8 278 aaPredicted RBP25.03■■□□□ 1.6
TSC2-209ENST00000463601 DBF4Q9UBU7 674 aaPredicted RBP25.03■■□□□ 1.6
TSC2-209ENST00000463601 ANKRD13DQ6ZTN6 518 aa25.02■■□□□ 1.6
TSC2-209ENST00000463601 PLBD2Q8NHP8 589 aa25.02■■□□□ 1.6
TSC2-209ENST00000463601 IFT57Q9NWB7 429 aa25.02■■□□□ 1.6
TSC2-209ENST00000463601 DDX60Q8IY21 1712 aaKnown RBP25.02■■□□□ 1.6
TSC2-209ENST00000463601 RNF123Q5XPI4 1314 aa25.02■■□□□ 1.6
TSC2-209ENST00000463601 IQCA1LA6NCM1 817 aa25.01■■□□□ 1.59
TSC2-209ENST00000463601 ELL2O00472 640 aaPredicted RBP25.01■■□□□ 1.59
TSC2-209ENST00000463601 ATP5J2-PTCD1G3V325 749 aa25■■□□□ 1.59
TSC2-209ENST00000463601 JDP2Q8WYK2 163 aa25■■□□□ 1.59
TSC2-209ENST00000463601 ISCA1Q9BUE6 129 aa25■■□□□ 1.59
TSC2-209ENST00000463601 ATP6V0A2Q9Y487 856 aa25■■□□□ 1.59
TSC2-209ENST00000463601 SH3TC1Q8TE82 1336 aa25■■□□□ 1.59
TSC2-209ENST00000463601 GNAI1P63096 354 aa24.99■■□□□ 1.59
TSC2-209ENST00000463601 JMYQ8N9B5 988 aa24.99■■□□□ 1.59
TSC2-209ENST00000463601 HYPKQ9NX55 129 aa24.99■■□□□ 1.59
TSC2-209ENST00000463601 LARGE2Q8N3Y3 721 aa24.98■■□□□ 1.59
TSC2-209ENST00000463601 C8orf58Q8NAV2 365 aa24.98■■□□□ 1.59
TSC2-209ENST00000463601 HACL1Q9UJ83 578 aa24.98■■□□□ 1.59
TSC2-209ENST00000463601 GRIPAP1Q4V328 841 aa24.97■■□□□ 1.59
TSC2-209ENST00000463601 EAPPQ56P03 285 aaPredicted RBP24.97■■□□□ 1.59
TSC2-209ENST00000463601 LDHDQ86WU2 507 aa24.97■■□□□ 1.59
TSC2-209ENST00000463601 GPC2Q8N158 579 aa24.97■■□□□ 1.59
TSC2-209ENST00000463601 FAM89AQ96GI7 184 aa24.97■■□□□ 1.59
TSC2-209ENST00000463601 PHAXQ9H814 394 aaKnown RBP24.97■■□□□ 1.59
TSC2-209ENST00000463601 GJA3Q9Y6H8 435 aa24.97■■□□□ 1.59
TSC2-209ENST00000463601 ADAMTSL1Q8N6G6 1762 aa24.97■■□□□ 1.59
TSC2-209ENST00000463601 LTBP1Q14766 1721 aa24.97■■□□□ 1.59
TSC2-209ENST00000463601 EPHX2P34913 555 aa24.96■■□□□ 1.59
TSC2-209ENST00000463601 CCDC27Q2M243 656 aa24.96■■□□□ 1.59
TSC2-209ENST00000463601 COL4A1P02462 1669 aa24.95■■□□□ 1.58
TSC2-209ENST00000463601 EIF6P56537 245 aaKnown RBP24.95■■□□□ 1.58
TSC2-209ENST00000463601 CALD1Q05682 793 aaKnown RBP24.95■■□□□ 1.58
TSC2-209ENST00000463601 AOC3Q16853 763 aa24.95■■□□□ 1.58
TSC2-209ENST00000463601 NCBP3Q53F19 620 aaKnown RBP24.95■■□□□ 1.58
TSC2-209ENST00000463601 RTL5Q5HYW3 569 aaPredicted RBP24.95■■□□□ 1.58
TSC2-209ENST00000463601 FAM9BQ8IZU0 186 aa24.95■■□□□ 1.58
TSC2-209ENST00000463601 PPIP5K2O43314 1243 aa24.94■■□□□ 1.58
TSC2-209ENST00000463601 BBOX1O75936 387 aa24.94■■□□□ 1.58
TSC2-209ENST00000463601 DDX46Q7L014 1031 aaKnown RBP24.94■■□□□ 1.58
TSC2-209ENST00000463601 SP8Q8IXZ3 490 aa24.94■■□□□ 1.58
TSC2-209ENST00000463601 GRAPQ13588 217 aa24.93■■□□□ 1.58
TSC2-209ENST00000463601 GRAPLQ8TC17 118 aaPredicted RBP24.93■■□□□ 1.58
TSC2-209ENST00000463601 CLEC11AQ9Y240 323 aa24.93■■□□□ 1.58
TSC2-209ENST00000463601 PASKQ96RG2 1323 aa24.92■■□□□ 1.58
TSC2-209ENST00000463601 IFFO2Q5TF58 517 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms