RNA–Protein interactions for RNA: ENST00000463533.1

ANKRD28-208, Transcript of ankyrin repeat domain 28, humanhuman

TSL 3

Gene ANKRD28, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-208ENST00000463533 ATP6V1AP38606 617 aa10.92□□□□□ -0.66
ANKRD28-208ENST00000463533 SIK1P57059 783 aa10.92□□□□□ -0.66
ANKRD28-208ENST00000463533 SLFN5Q08AF3 891 aa10.92□□□□□ -0.66
ANKRD28-208ENST00000463533 TXNRD1Q16881 649 aa10.92□□□□□ -0.66
ANKRD28-208ENST00000463533 KRT24Q2M2I5 525 aa10.92□□□□□ -0.66
ANKRD28-208ENST00000463533 FMNL2Q96PY5 1086 aa10.92□□□□□ -0.66
ANKRD28-208ENST00000463533 CCNL1Q9UK58 526 aaPredicted RBP10.92□□□□□ -0.66
ANKRD28-208ENST00000463533 FANCIQ9NVI1 1328 aa10.91□□□□□ -0.66
ANKRD28-208ENST00000463533 PRAMEF22A3QJZ6 481 aa10.91□□□□□ -0.66
ANKRD28-208ENST00000463533 ITPK1Q13572 414 aa10.91□□□□□ -0.66
ANKRD28-208ENST00000463533 NBR1Q14596 966 aa10.91□□□□□ -0.66
ANKRD28-208ENST00000463533 DNAJC10Q8IXB1 793 aa10.91□□□□□ -0.66
ANKRD28-208ENST00000463533 MYH16Q9H6N6 1097 aa10.91□□□□□ -0.66
ANKRD28-208ENST00000463533 LRRC4BQ9NT99 713 aa10.91□□□□□ -0.66
ANKRD28-208ENST00000463533 RREB1Q92766 1687 aa10.91□□□□□ -0.66
ANKRD28-208ENST00000463533 HEG1Q9ULI3 1381 aa10.9□□□□□ -0.66
ANKRD28-208ENST00000463533 ZNF831Q5JPB2 1677 aa10.9□□□□□ -0.66
ANKRD28-208ENST00000463533 E9PSI1 815 aa10.9□□□□□ -0.66
ANKRD28-208ENST00000463533 ELL2O00472 640 aaPredicted RBP10.9□□□□□ -0.66
ANKRD28-208ENST00000463533 C8orf58Q8NAV2 365 aa10.9□□□□□ -0.66
ANKRD28-208ENST00000463533 SLC4A5Q9BY07 1137 aa10.9□□□□□ -0.66
ANKRD28-208ENST00000463533 MYH14Q7Z406 1995 aaKnown RBP10.9□□□□□ -0.66
ANKRD28-208ENST00000463533 COL5A3P25940 1745 aaPredicted RBP10.89□□□□□ -0.67
ANKRD28-208ENST00000463533 NUP188Q5SRE5 1749 aa10.89□□□□□ -0.67
ANKRD28-208ENST00000463533 GIGYF1O75420 1035 aaPredicted RBP10.89□□□□□ -0.67
ANKRD28-208ENST00000463533 SNRPA1P09661 255 aaKnown RBP10.89□□□□□ -0.67
ANKRD28-208ENST00000463533 EXOSC9Q06265 439 aaKnown RBP10.89□□□□□ -0.67
ANKRD28-208ENST00000463533 SLC27A3Q5K4L6 730 aa10.89□□□□□ -0.67
ANKRD28-208ENST00000463533 TRMT2AQ8IZ69 625 aaKnown RBP10.89□□□□□ -0.67
ANKRD28-208ENST00000463533 TSPYL6Q8N831 410 aa10.89□□□□□ -0.67
ANKRD28-208ENST00000463533 LINC00116Q8NCU8 138 aa10.89□□□□□ -0.67
ANKRD28-208ENST00000463533 USP16Q9Y5T5 823 aa10.89□□□□□ -0.67
ANKRD28-208ENST00000463533 LAMB4A4D0S4 1761 aa10.88□□□□□ -0.67
ANKRD28-208ENST00000463533 GRXCR2A6NFK2 248 aa10.88□□□□□ -0.67
ANKRD28-208ENST00000463533 PPP1R3GB7ZBB8 358 aa10.88□□□□□ -0.67
ANKRD28-208ENST00000463533 C6orf132Q5T0Z8 1188 aa10.88□□□□□ -0.67
ANKRD28-208ENST00000463533 DUSP27Q5VZP5 1158 aa10.88□□□□□ -0.67
ANKRD28-208ENST00000463533 VSIG10Q8N0Z9 540 aa10.88□□□□□ -0.67
ANKRD28-208ENST00000463533 NECTIN2Q92692 538 aa10.88□□□□□ -0.67
ANKRD28-208ENST00000463533 VPS9D1Q9Y2B5 631 aa10.88□□□□□ -0.67
ANKRD28-208ENST00000463533 CICQ96RK0 1608 aaPredicted RBP10.87□□□□□ -0.67
ANKRD28-208ENST00000463533 C4BP0C0L5 1744 aa10.87□□□□□ -0.67
ANKRD28-208ENST00000463533 SOCS7O14512 581 aa10.87□□□□□ -0.67
ANKRD28-208ENST00000463533 HRO43593 1189 aa10.87□□□□□ -0.67
ANKRD28-208ENST00000463533 CYP19A1P11511 503 aaPredicted RBP10.87□□□□□ -0.67
ANKRD28-208ENST00000463533 EIF2S2P20042 333 aaKnown RBP10.87□□□□□ -0.67
ANKRD28-208ENST00000463533 RNF166Q96A37 237 aaPredicted RBP10.87□□□□□ -0.67
ANKRD28-208ENST00000463533 ZBED2Q9BTP6 218 aa10.87□□□□□ -0.67
ANKRD28-208ENST00000463533 TEX13AQ9BXU3 409 aaPredicted RBP10.87□□□□□ -0.67
ANKRD28-208ENST00000463533 TUBGCP6Q96RT7 1819 aa10.86□□□□□ -0.67
ANKRD28-208ENST00000463533 A1BGP04217 495 aa10.86□□□□□ -0.67
ANKRD28-208ENST00000463533 PIP4K2AP48426 406 aaPredicted RBP10.86□□□□□ -0.67
ANKRD28-208ENST00000463533 TWISTNBQ3B726 338 aaPredicted RBP10.86□□□□□ -0.67
ANKRD28-208ENST00000463533 SMIM5Q71RC9 77 aa10.86□□□□□ -0.67
ANKRD28-208ENST00000463533 EP400Q96L91 3159 aa10.86□□□□□ -0.67
ANKRD28-208ENST00000463533 TCERG1O14776 1098 aaKnown RBP10.85□□□□□ -0.67
ANKRD28-208ENST00000463533 VAMP4O75379 141 aa10.85□□□□□ -0.67
ANKRD28-208ENST00000463533 STARD3NLO95772 234 aa10.85□□□□□ -0.67
ANKRD28-208ENST00000463533 CRKLP46109 303 aaKnown RBP10.85□□□□□ -0.67
ANKRD28-208ENST00000463533 ZNF827Q17R98 1081 aa10.85□□□□□ -0.67
ANKRD28-208ENST00000463533 INTS5Q6P9B9 1019 aaKnown RBP10.85□□□□□ -0.67
ANKRD28-208ENST00000463533 UBR3Q6ZT12 1888 aa10.85□□□□□ -0.67
ANKRD28-208ENST00000463533 MAP3K7O43318 606 aa10.84□□□□□ -0.67
ANKRD28-208ENST00000463533 COL9A1P20849 921 aa10.84□□□□□ -0.67
ANKRD28-208ENST00000463533 CANXP27824 592 aaKnown RBP10.84□□□□□ -0.67
ANKRD28-208ENST00000463533 HDGFL1Q5TGJ6 251 aa10.84□□□□□ -0.67
ANKRD28-208ENST00000463533 AK7Q96M32 723 aa10.84□□□□□ -0.67
ANKRD28-208ENST00000463533 CCDC87Q9NVE4 849 aa10.84□□□□□ -0.67
ANKRD28-208ENST00000463533 STK32BQ9NY57 414 aa10.84□□□□□ -0.67
ANKRD28-208ENST00000463533 CNTNAP4Q9C0A0 1308 aa10.84□□□□□ -0.67
ANKRD28-208ENST00000463533 CACNA1FO60840 1977 aa10.83□□□□□ -0.68
ANKRD28-208ENST00000463533 NBPF26B4DH59 902 aa10.83□□□□□ -0.68
ANKRD28-208ENST00000463533 GNPATO15228 680 aa10.83□□□□□ -0.68
ANKRD28-208ENST00000463533 ANXA1P04083 346 aa10.83□□□□□ -0.68
ANKRD28-208ENST00000463533 HOXB7P09629 217 aa10.83□□□□□ -0.68
ANKRD28-208ENST00000463533 RC3H1Q5TC82 1133 aaKnown RBP10.83□□□□□ -0.68
ANKRD28-208ENST00000463533 NBPF14Q5TI25 921 aa10.83□□□□□ -0.68
ANKRD28-208ENST00000463533 NBPF10Q6P3W6 841 aaKnown RBP10.83□□□□□ -0.68
ANKRD28-208ENST00000463533 AMIGO3Q86WK7 504 aa10.83□□□□□ -0.68
ANKRD28-208ENST00000463533 NBPF15Q8N660 670 aa10.83□□□□□ -0.68
ANKRD28-208ENST00000463533 ZBTB1Q9Y2K1 713 aa10.83□□□□□ -0.68
ANKRD28-208ENST00000463533 MYL6BP14649 208 aa10.82□□□□□ -0.68
ANKRD28-208ENST00000463533 OSBPP22059 807 aa10.82□□□□□ -0.68
ANKRD28-208ENST00000463533 SLC15A2Q16348 729 aa10.82□□□□□ -0.68
ANKRD28-208ENST00000463533 PROSER3Q2NL68 480 aa10.82□□□□□ -0.68
ANKRD28-208ENST00000463533 TFCP2L1Q9NZI6 479 aa10.82□□□□□ -0.68
ANKRD28-208ENST00000463533 CHPF2Q9P2E5 772 aa10.82□□□□□ -0.68
ANKRD28-208ENST00000463533 ZNF330Q9Y3S2 320 aaPredicted RBP10.82□□□□□ -0.68
ANKRD28-208ENST00000463533 SOS1Q07889 1333 aaPredicted RBP10.82□□□□□ -0.68
ANKRD28-208ENST00000463533 RPS6KA4O75676 772 aa10.81□□□□□ -0.68
ANKRD28-208ENST00000463533 HMGB2P26583 209 aaKnown RBP10.81□□□□□ -0.68
ANKRD28-208ENST00000463533 CCDC30Q5VVM6 783 aa10.81□□□□□ -0.68
ANKRD28-208ENST00000463533 RTCBQ9Y3I0 505 aaKnown RBP10.81□□□□□ -0.68
ANKRD28-208ENST00000463533 QSER1Q2KHR3 1735 aa10.81□□□□□ -0.68
ANKRD28-208ENST00000463533 TSR1Q2NL82 804 aaKnown RBP10.8□□□□□ -0.68
ANKRD28-208ENST00000463533 ARXQ96QS3 562 aa10.8□□□□□ -0.68
ANKRD28-208ENST00000463533 DDX21Q9NR30 783 aaKnown RBP eCLIP10.8□□□□□ -0.68
ANKRD28-208ENST00000463533 ERBB4Q15303 1308 aa10.8□□□□□ -0.68
ANKRD28-208ENST00000463533 C4AP0C0L4 1744 aa10.79□□□□□ -0.68
ANKRD28-208ENST00000463533 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms