RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 RACK1P63244 317 aaKnown RBP5.75□□□□□ -1.49
GPNMB-205ENST00000463011 GNASQ5JWF2 1037 aa5.75□□□□□ -1.49
GPNMB-205ENST00000463011 SLC27A3Q5K4L6 730 aa5.75□□□□□ -1.49
GPNMB-205ENST00000463011 ZNF654Q8IZM8 581 aa5.75□□□□□ -1.49
GPNMB-205ENST00000463011 KLRG1Q96E93 195 aa5.75□□□□□ -1.49
GPNMB-205ENST00000463011 FOXD3Q9UJU5 478 aaPredicted RBP5.75□□□□□ -1.49
GPNMB-205ENST00000463011 DDX41Q9UJV9 622 aaKnown RBP5.75□□□□□ -1.49
GPNMB-205ENST00000463011 USP20Q9Y2K6 914 aa5.75□□□□□ -1.49
GPNMB-205ENST00000463011 LOC100996750A0A140TA64 210 aa5.74□□□□□ -1.49
GPNMB-205ENST00000463011 TGFBR3LH3BV60 316 aa5.74□□□□□ -1.49
GPNMB-205ENST00000463011 IRS1P35568 1242 aa5.74□□□□□ -1.49
GPNMB-205ENST00000463011 FOXC1Q12948 553 aa5.74□□□□□ -1.49
GPNMB-205ENST00000463011 C4orf17Q53FE4 359 aa5.74□□□□□ -1.49
GPNMB-205ENST00000463011 USP48Q86UV5 1035 aa5.74□□□□□ -1.49
GPNMB-205ENST00000463011 ZNF280CQ8ND82 737 aa5.74□□□□□ -1.49
GPNMB-205ENST00000463011 EPS8L3Q8TE67 593 aaKnown RBP5.74□□□□□ -1.49
GPNMB-205ENST00000463011 C7orf43Q8WVR3 580 aa5.74□□□□□ -1.49
GPNMB-205ENST00000463011 CCDC74AQ96AQ1 378 aa5.74□□□□□ -1.49
GPNMB-205ENST00000463011 SUSD3Q96L08 255 aa5.74□□□□□ -1.49
GPNMB-205ENST00000463011 KLF16Q9BXK1 252 aaPredicted RBP5.74□□□□□ -1.49
GPNMB-205ENST00000463011 KRTAP4-6Q9BYQ5 205 aa5.74□□□□□ -1.49
GPNMB-205ENST00000463011 OSBPL7Q9BZF2 842 aa5.74□□□□□ -1.49
GPNMB-205ENST00000463011 GRIP2Q9C0E4 1043 aa5.74□□□□□ -1.49
GPNMB-205ENST00000463011 GGT7Q9UJ14 662 aa5.74□□□□□ -1.49
GPNMB-205ENST00000463011 TNFRSF21O75509 655 aa5.73□□□□□ -1.49
GPNMB-205ENST00000463011 PHKA2P46019 1235 aa5.73□□□□□ -1.49
GPNMB-205ENST00000463011 IDH3AP50213 366 aa5.73□□□□□ -1.49
GPNMB-205ENST00000463011 ARID5AQ03989 594 aa5.73□□□□□ -1.49
GPNMB-205ENST00000463011 MEI1Q5TIA1 1274 aa5.73□□□□□ -1.49
GPNMB-205ENST00000463011 CMTR1Q8N1G2 835 aaKnown RBP5.73□□□□□ -1.49
GPNMB-205ENST00000463011 HSH2DQ96JZ2 352 aa5.73□□□□□ -1.49
GPNMB-205ENST00000463011 GMLQ99445 158 aa5.73□□□□□ -1.49
GPNMB-205ENST00000463011 C12orf49Q9H741 205 aa5.73□□□□□ -1.49
GPNMB-205ENST00000463011 SRA1Q9HD15 236 aaKnown RBP5.73□□□□□ -1.49
GPNMB-205ENST00000463011 DMGDHQ9UI17 866 aaKnown RBP5.73□□□□□ -1.49
GPNMB-205ENST00000463011 USP31Q70CQ4 1352 aa5.72□□□□□ -1.49
GPNMB-205ENST00000463011 J3QL48 77 aa5.72□□□□□ -1.49
GPNMB-205ENST00000463011 PPM1GO15355 546 aaPredicted RBP5.72□□□□□ -1.49
GPNMB-205ENST00000463011 POLR3DP05423 398 aaPredicted RBP5.72□□□□□ -1.49
GPNMB-205ENST00000463011 PTPN12Q05209 780 aaKnown RBP5.72□□□□□ -1.49
GPNMB-205ENST00000463011 TAF1CQ15572 869 aaPredicted RBP5.72□□□□□ -1.49
GPNMB-205ENST00000463011 HIF1AQ16665 826 aa5.72□□□□□ -1.49
GPNMB-205ENST00000463011 NBPF1Q3BBV0 1214 aa5.72□□□□□ -1.49
GPNMB-205ENST00000463011 CCDC144BQ3MJ40 725 aa5.72□□□□□ -1.49
GPNMB-205ENST00000463011 SPRYD7Q5W111 196 aa5.72□□□□□ -1.49
GPNMB-205ENST00000463011 HS2ST1Q7LGA3 356 aa5.72□□□□□ -1.49
GPNMB-205ENST00000463011 ZNF438Q7Z4V0 828 aa5.72□□□□□ -1.49
GPNMB-205ENST00000463011 PMFBP1Q8TBY8 1022 aa5.72□□□□□ -1.49
GPNMB-205ENST00000463011 ZFYVE28Q9HCC9 887 aa5.72□□□□□ -1.49
GPNMB-205ENST00000463011 CUEDC1Q9NWM3 386 aaPredicted RBP5.72□□□□□ -1.49
GPNMB-205ENST00000463011 FNDC3AQ9Y2H6 1198 aaKnown RBP5.72□□□□□ -1.49
GPNMB-205ENST00000463011 GIPC1O14908 333 aa5.71□□□□□ -1.5
GPNMB-205ENST00000463011 PHACTR2O75167 634 aa5.71□□□□□ -1.5
GPNMB-205ENST00000463011 TATP17735 454 aaPredicted RBP5.71□□□□□ -1.5
GPNMB-205ENST00000463011 ZNF697Q5TEC3 545 aa5.71□□□□□ -1.5
GPNMB-205ENST00000463011 XKR5Q6UX68 686 aa5.71□□□□□ -1.5
GPNMB-205ENST00000463011 BICDL1Q6ZP65 573 aa5.71□□□□□ -1.5
GPNMB-205ENST00000463011 NOP9Q86U38 636 aaKnown RBP5.71□□□□□ -1.5
GPNMB-205ENST00000463011 VPS37DQ86XT2 251 aa5.71□□□□□ -1.5
GPNMB-205ENST00000463011 SNIP1Q8TAD8 396 aaKnown RBP5.71□□□□□ -1.5
GPNMB-205ENST00000463011 INSM2Q96T92 566 aaPredicted RBP5.71□□□□□ -1.5
GPNMB-205ENST00000463011 NEUROD4Q9HD90 331 aa5.71□□□□□ -1.5
GPNMB-205ENST00000463011 RTCBQ9Y3I0 505 aaKnown RBP5.71□□□□□ -1.5
GPNMB-205ENST00000463011 V9GY48 417 aaPredicted RBP5.71□□□□□ -1.5
GPNMB-205ENST00000463011 TTC24A2A3L6 582 aaPredicted RBP5.7□□□□□ -1.5
GPNMB-205ENST00000463011 UBAP1LF5GYI3 381 aa5.7□□□□□ -1.5
GPNMB-205ENST00000463011 USP17L7P0C7H9 530 aa5.7□□□□□ -1.5
GPNMB-205ENST00000463011 TIMP2P16035 220 aa5.7□□□□□ -1.5
GPNMB-205ENST00000463011 INPP5BP32019 993 aa5.7□□□□□ -1.5
GPNMB-205ENST00000463011 GPC1P35052 558 aa5.7□□□□□ -1.5
GPNMB-205ENST00000463011 RNF144AP50876 292 aaPredicted RBP5.7□□□□□ -1.5
GPNMB-205ENST00000463011 ARSDP51689 593 aa5.7□□□□□ -1.5
GPNMB-205ENST00000463011 TRIP4Q15650 581 aaPredicted RBP5.7□□□□□ -1.5
GPNMB-205ENST00000463011 IER5Q5VY09 327 aa5.7□□□□□ -1.5
GPNMB-205ENST00000463011 NXPE4Q6UWF7 544 aa5.7□□□□□ -1.5
GPNMB-205ENST00000463011 SNX29Q8TEQ0 813 aa5.7□□□□□ -1.5
GPNMB-205ENST00000463011 ARMC5Q96C12 935 aa5.7□□□□□ -1.5
GPNMB-205ENST00000463011 ELP3Q9H9T3 547 aa5.7□□□□□ -1.5
GPNMB-205ENST00000463011 ZDHHC3Q9NYG2 299 aa5.7□□□□□ -1.5
GPNMB-205ENST00000463011 PKD2L1Q9P0L9 805 aa5.7□□□□□ -1.5
GPNMB-205ENST00000463011 TMEM63CQ9P1W3 806 aa5.7□□□□□ -1.5
GPNMB-205ENST00000463011 GADD45BO75293 160 aaPredicted RBP5.69□□□□□ -1.5
GPNMB-205ENST00000463011 RBL2Q08999 1139 aa5.69□□□□□ -1.5
GPNMB-205ENST00000463011 POU4F2Q12837 409 aa5.69□□□□□ -1.5
GPNMB-205ENST00000463011 PDE12Q6L8Q7 609 aaKnown RBP5.69□□□□□ -1.5
GPNMB-205ENST00000463011 LRRC69Q6ZNQ3 347 aa5.69□□□□□ -1.5
GPNMB-205ENST00000463011 ZNF598Q86UK7 904 aaKnown RBP5.69□□□□□ -1.5
GPNMB-205ENST00000463011 BCO2Q9BYV7 579 aa5.69□□□□□ -1.5
GPNMB-205ENST00000463011 NPHS2Q9NP85 383 aa5.69□□□□□ -1.5
GPNMB-205ENST00000463011 POLMQ9NP87 494 aaPredicted RBP5.69□□□□□ -1.5
GPNMB-205ENST00000463011 COPRSQ9NQ92 184 aa5.69□□□□□ -1.5
GPNMB-205ENST00000463011 ANKIB1Q9P2G1 1089 aa5.69□□□□□ -1.5
GPNMB-205ENST00000463011 FAM8A1Q9UBU6 413 aa5.69□□□□□ -1.5
GPNMB-205ENST00000463011 KCNMB2Q9Y691 235 aa5.69□□□□□ -1.5
GPNMB-205ENST00000463011 ANKRD62A6NC57 917 aa5.68□□□□□ -1.5
GPNMB-205ENST00000463011 PAK2Q13177 524 aa5.68□□□□□ -1.5
GPNMB-205ENST00000463011 ARSJQ5FYB0 599 aaPredicted RBP5.68□□□□□ -1.5
GPNMB-205ENST00000463011 NBPF10Q6P3W6 841 aaKnown RBP5.68□□□□□ -1.5
GPNMB-205ENST00000463011 BTLAQ7Z6A9 289 aa5.68□□□□□ -1.5
GPNMB-205ENST00000463011 MCF2L2Q86YR7 1114 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms