RNA–Protein interactions for RNA: ENST00000462731.1

SGCE-209, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-209ENST00000462731 STK17AQ9UEE5 414 aa8.01□□□□□ -1.13
SGCE-209ENST00000462731 FOXO3O43524 673 aa8□□□□□ -1.13
SGCE-209ENST00000462731 FZD6O60353 706 aa8□□□□□ -1.13
SGCE-209ENST00000462731 MAN1A1P33908 653 aa8□□□□□ -1.13
SGCE-209ENST00000462731 RAB33AQ14088 237 aa8□□□□□ -1.13
SGCE-209ENST00000462731 NAA30Q147X3 362 aaPredicted RBP8□□□□□ -1.13
SGCE-209ENST00000462731 ZNF280DQ6N043 979 aa8□□□□□ -1.13
SGCE-209ENST00000462731 RETREG3Q86VR2 466 aa8□□□□□ -1.13
SGCE-209ENST00000462731 WDR75Q8IWA0 830 aaKnown RBP8□□□□□ -1.13
SGCE-209ENST00000462731 PPM1EQ8WY54 764 aa8□□□□□ -1.13
SGCE-209ENST00000462731 TSR2Q969E8 191 aaKnown RBP8□□□□□ -1.13
SGCE-209ENST00000462731 PURBQ96QR8 312 aaKnown RBP8□□□□□ -1.13
SGCE-209ENST00000462731 FEZ1Q99689 392 aa8□□□□□ -1.13
SGCE-209ENST00000462731 ZNF700Q9H0M5 742 aa8□□□□□ -1.13
SGCE-209ENST00000462731 NEUROD4Q9HD90 331 aa8□□□□□ -1.13
SGCE-209ENST00000462731 DOLKQ9UPQ8 538 aa8□□□□□ -1.13
SGCE-209ENST00000462731 PCDHB9Q9Y5E1 797 aa8□□□□□ -1.13
SGCE-209ENST00000462731 CFAP69A5D8W1 941 aa7.99□□□□□ -1.13
SGCE-209ENST00000462731 MZF1P28698 734 aaPredicted RBP7.99□□□□□ -1.13
SGCE-209ENST00000462731 EPHB1P54762 984 aa7.99□□□□□ -1.13
SGCE-209ENST00000462731 LMOD3Q0VAK6 560 aa7.99□□□□□ -1.13
SGCE-209ENST00000462731 BRD3Q15059 726 aa7.99□□□□□ -1.13
SGCE-209ENST00000462731 NFE2Q16621 373 aaPredicted RBP7.99□□□□□ -1.13
SGCE-209ENST00000462731 RNF20Q5VTR2 975 aa7.99□□□□□ -1.13
SGCE-209ENST00000462731 KRT26Q7Z3Y9 468 aa7.99□□□□□ -1.13
SGCE-209ENST00000462731 LAPTM4BQ86VI4 370 aa7.99□□□□□ -1.13
SGCE-209ENST00000462731 TRPM4Q8TD43 1214 aa7.99□□□□□ -1.13
SGCE-209ENST00000462731 CEP63Q96MT8 703 aa7.99□□□□□ -1.13
SGCE-209ENST00000462731 ARNT2Q9HBZ2 717 aa7.99□□□□□ -1.13
SGCE-209ENST00000462731 CASS4Q9NQ75 786 aa7.99□□□□□ -1.13
SGCE-209ENST00000462731 CNTN3Q9P232 1028 aa7.99□□□□□ -1.13
SGCE-209ENST00000462731 ANAPC4Q9UJX5 808 aa7.99□□□□□ -1.13
SGCE-209ENST00000462731 SCINQ9Y6U3 715 aa7.99□□□□□ -1.13
SGCE-209ENST00000462731 KLF4O43474 513 aa7.98□□□□□ -1.13
SGCE-209ENST00000462731 TSPAN6O43657 245 aa7.98□□□□□ -1.13
SGCE-209ENST00000462731 ZNF500O60304 480 aaPredicted RBP7.98□□□□□ -1.13
SGCE-209ENST00000462731 MYL1P05976 194 aa7.98□□□□□ -1.13
SGCE-209ENST00000462731 HCLS1P14317 486 aaPredicted RBP7.98□□□□□ -1.13
SGCE-209ENST00000462731 EIF1AXP47813 144 aaKnown RBP7.98□□□□□ -1.13
SGCE-209ENST00000462731 PPP2R5AQ15172 486 aa7.98□□□□□ -1.13
SGCE-209ENST00000462731 ANKS3Q6ZW76 656 aa7.98□□□□□ -1.13
SGCE-209ENST00000462731 TATDN2Q93075 761 aa7.98□□□□□ -1.13
SGCE-209ENST00000462731 ZFRQ96KR1 1074 aaKnown RBP7.98□□□□□ -1.13
SGCE-209ENST00000462731 TMEM260Q9NX78 707 aa7.98□□□□□ -1.13
SGCE-209ENST00000462731 MAP3K20Q9NYL2 800 aaKnown RBP7.98□□□□□ -1.13
SGCE-209ENST00000462731 TSKSQ9UJT2 592 aa7.98□□□□□ -1.13
SGCE-209ENST00000462731 ESYT3A0FGR9 886 aa7.97□□□□□ -1.13
SGCE-209ENST00000462731 FAM221BA6H8Z2 402 aa7.97□□□□□ -1.13
SGCE-209ENST00000462731 LGR5O75473 907 aa7.97□□□□□ -1.13
SGCE-209ENST00000462731 FOSP01100 380 aaPredicted RBP7.97□□□□□ -1.13
SGCE-209ENST00000462731 COL6A1P12109 1028 aa7.97□□□□□ -1.13
SGCE-209ENST00000462731 IGFBP4P22692 258 aa7.97□□□□□ -1.13
SGCE-209ENST00000462731 EIF4BP23588 611 aaKnown RBP7.97□□□□□ -1.13
SGCE-209ENST00000462731 BRDTQ58F21 947 aaPredicted RBP7.97□□□□□ -1.13
SGCE-209ENST00000462731 C16orf86Q6ZW13 317 aa7.97□□□□□ -1.13
SGCE-209ENST00000462731 RAVER1Q8IY67 606 aaKnown RBP7.97□□□□□ -1.13
SGCE-209ENST00000462731 PGBD3Q8N328 593 aa7.97□□□□□ -1.13
SGCE-209ENST00000462731 SYMPKQ92797 1274 aaKnown RBP7.97□□□□□ -1.13
SGCE-209ENST00000462731 CFHR5Q9BXR6 569 aa7.97□□□□□ -1.13
SGCE-209ENST00000462731 ADAM33Q9BZ11 813 aa7.97□□□□□ -1.13
SGCE-209ENST00000462731 PNMA3Q9UL41 463 aa7.97□□□□□ -1.13
SGCE-209ENST00000462731 STRIP2Q9ULQ0 834 aa7.97□□□□□ -1.13
SGCE-209ENST00000462731 C3orf80F5H4A9 247 aa7.96□□□□□ -1.14
SGCE-209ENST00000462731 PTK2Q05397 1052 aa7.96□□□□□ -1.14
SGCE-209ENST00000462731 TSGA10IPQ3SY00 556 aa7.96□□□□□ -1.14
SGCE-209ENST00000462731 SYCP2LQ5T4T6 812 aa7.96□□□□□ -1.14
SGCE-209ENST00000462731 TTC39BQ5VTQ0 682 aaPredicted RBP7.96□□□□□ -1.14
SGCE-209ENST00000462731 NIF3L1Q9GZT8 377 aa7.96□□□□□ -1.14
SGCE-209ENST00000462731 TMX4Q9H1E5 349 aaPredicted RBP7.96□□□□□ -1.14
SGCE-209ENST00000462731 KANSL2Q9H9L4 492 aa7.96□□□□□ -1.14
SGCE-209ENST00000462731 SPG7Q9UQ90 795 aa7.96□□□□□ -1.14
SGCE-209ENST00000462731 PCDHGA11Q9Y5H2 935 aa7.96□□□□□ -1.14
SGCE-209ENST00000462731 NRDCO43847 1150 aa7.95□□□□□ -1.14
SGCE-209ENST00000462731 F12P00748 615 aaPredicted RBP7.95□□□□□ -1.14
SGCE-209ENST00000462731 NEFMP07197 916 aa7.95□□□□□ -1.14
SGCE-209ENST00000462731 SLC10A3P09131 477 aa7.95□□□□□ -1.14
SGCE-209ENST00000462731 CDKN1CP49918 316 aaPredicted RBP7.95□□□□□ -1.14
SGCE-209ENST00000462731 AAMPQ13685 434 aa7.95□□□□□ -1.14
SGCE-209ENST00000462731 RAPGEF1Q13905 1077 aa7.95□□□□□ -1.14
SGCE-209ENST00000462731 MAPRE1Q15691 268 aaKnown RBP7.95□□□□□ -1.14
SGCE-209ENST00000462731 PROX2Q3B8N5 592 aa7.95□□□□□ -1.14
SGCE-209ENST00000462731 OXLD1Q5BKU9 147 aa7.95□□□□□ -1.14
SGCE-209ENST00000462731 EFCAB2Q5VUJ9 269 aa7.95□□□□□ -1.14
SGCE-209ENST00000462731 ERMP1Q7Z2K6 904 aa7.95□□□□□ -1.14
SGCE-209ENST00000462731 TSEN2Q8NCE0 465 aaKnown RBP7.95□□□□□ -1.14
SGCE-209ENST00000462731 ARPC5LQ9BPX5 153 aa7.95□□□□□ -1.14
SGCE-209ENST00000462731 NRBP1Q9UHY1 535 aa7.95□□□□□ -1.14
SGCE-209ENST00000462731 USP31Q70CQ4 1352 aa7.95□□□□□ -1.14
SGCE-209ENST00000462731 ESPNB1AK53 854 aa7.94□□□□□ -1.14
SGCE-209ENST00000462731 ANP32CO43423 234 aa7.94□□□□□ -1.14
SGCE-209ENST00000462731 LILRB2Q8N423 598 aa7.94□□□□□ -1.14
SGCE-209ENST00000462731 GPKOWQ92917 476 aaPredicted RBP eCLIP7.94□□□□□ -1.14
SGCE-209ENST00000462731 PAGR1Q9BTK6 254 aa7.94□□□□□ -1.14
SGCE-209ENST00000462731 INO80BQ9C086 356 aaPredicted RBP7.94□□□□□ -1.14
SGCE-209ENST00000462731 TSR3Q9UJK0 312 aaKnown RBP7.94□□□□□ -1.14
SGCE-209ENST00000462731 ATP8A1Q9Y2Q0 1164 aa7.94□□□□□ -1.14
SGCE-209ENST00000462731 ALDH1L1O75891 902 aa7.93□□□□□ -1.14
SGCE-209ENST00000462731 PMLP29590 882 aa7.93□□□□□ -1.14
SGCE-209ENST00000462731 COPB2P35606 906 aa7.93□□□□□ -1.14
SGCE-209ENST00000462731 ETFBP38117 255 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms