RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 SPDYE1Q8NFV5 336 aaPredicted RBP10.53□□□□□ -0.72
CDC42BPA-210ENST00000462553 RTF1Q92541 710 aaKnown RBP10.53□□□□□ -0.72
CDC42BPA-210ENST00000462553 TAF1DQ9H5J8 278 aaPredicted RBP10.53□□□□□ -0.72
CDC42BPA-210ENST00000462553 NUDCQ9Y266 331 aa10.53□□□□□ -0.72
CDC42BPA-210ENST00000462553 TAF1P21675 1872 aa10.53□□□□□ -0.72
CDC42BPA-210ENST00000462553 HTATSF1O43719 755 aaKnown RBP10.52□□□□□ -0.73
CDC42BPA-210ENST00000462553 PRKAR2AP13861 404 aaKnown RBP10.52□□□□□ -0.73
CDC42BPA-210ENST00000462553 EVX2Q03828 476 aa10.52□□□□□ -0.73
CDC42BPA-210ENST00000462553 CRY2Q49AN0 593 aa10.52□□□□□ -0.73
CDC42BPA-210ENST00000462553 SLC51AQ86UW1 340 aa10.52□□□□□ -0.73
CDC42BPA-210ENST00000462553 LDHDQ86WU2 507 aa10.52□□□□□ -0.73
CDC42BPA-210ENST00000462553 TNS4Q8IZW8 715 aa10.52□□□□□ -0.73
CDC42BPA-210ENST00000462553 ZNF277Q9NRM2 450 aaPredicted RBP10.52□□□□□ -0.73
CDC42BPA-210ENST00000462553 MKRN1Q9UHC7 482 aaKnown RBP10.52□□□□□ -0.73
CDC42BPA-210ENST00000462553 MYBBP1AQ9BQG0 1328 aaKnown RBP10.52□□□□□ -0.73
CDC42BPA-210ENST00000462553 IBTKQ9P2D0 1353 aaPredicted RBP10.52□□□□□ -0.73
CDC42BPA-210ENST00000462553 IQCA1LA6NCM1 817 aa10.51□□□□□ -0.73
CDC42BPA-210ENST00000462553 TPTE2Q6XPS3 522 aa10.51□□□□□ -0.73
CDC42BPA-210ENST00000462553 MIS18AQ9NYP9 233 aa10.51□□□□□ -0.73
CDC42BPA-210ENST00000462553 CLEC11AQ9Y240 323 aa10.51□□□□□ -0.73
CDC42BPA-210ENST00000462553 UBN2Q6ZU65 1347 aa10.51□□□□□ -0.73
CDC42BPA-210ENST00000462553 LRRC37AA6NMS7 1700 aa10.5□□□□□ -0.73
CDC42BPA-210ENST00000462553 ZNF316A6NFI3 1004 aaPredicted RBP10.5□□□□□ -0.73
CDC42BPA-210ENST00000462553 FAM177BA6PVY3 158 aa10.5□□□□□ -0.73
CDC42BPA-210ENST00000462553 FZD9O00144 591 aa10.5□□□□□ -0.73
CDC42BPA-210ENST00000462553 ITGBL1O95965 494 aaPredicted RBP10.5□□□□□ -0.73
CDC42BPA-210ENST00000462553 TAF7Q15545 349 aaPredicted RBP10.5□□□□□ -0.73
CDC42BPA-210ENST00000462553 PLEKHF1Q96S99 279 aa10.5□□□□□ -0.73
CDC42BPA-210ENST00000462553 PRKRIP1Q9H875 184 aaPredicted RBP10.5□□□□□ -0.73
CDC42BPA-210ENST00000462553 DDX60Q8IY21 1712 aaKnown RBP10.5□□□□□ -0.73
CDC42BPA-210ENST00000462553 IARSP41252 1262 aaKnown RBP10.49□□□□□ -0.73
CDC42BPA-210ENST00000462553 TTLL7Q6ZT98 887 aa10.49□□□□□ -0.73
CDC42BPA-210ENST00000462553 NUTM1Q86Y26 1132 aa10.49□□□□□ -0.73
CDC42BPA-210ENST00000462553 RTKN2Q8IZC4 609 aa10.49□□□□□ -0.73
CDC42BPA-210ENST00000462553 PSMD1Q99460 953 aa10.49□□□□□ -0.73
CDC42BPA-210ENST00000462553 RNF123Q5XPI4 1314 aa10.49□□□□□ -0.73
CDC42BPA-210ENST00000462553 MAP3K15Q6ZN16 1313 aa10.49□□□□□ -0.73
CDC42BPA-210ENST00000462553 ERVV-1B6SEH8 477 aa10.48□□□□□ -0.73
CDC42BPA-210ENST00000462553 FOXN1O15353 648 aa10.48□□□□□ -0.73
CDC42BPA-210ENST00000462553 EIF4A1P60842 406 aaKnown RBP10.48□□□□□ -0.73
CDC42BPA-210ENST00000462553 C3orf67Q6ZVT6 689 aa10.48□□□□□ -0.73
CDC42BPA-210ENST00000462553 THUMPD2Q9BTF0 503 aaKnown RBP10.48□□□□□ -0.73
CDC42BPA-210ENST00000462553 HACL1Q9UJ83 578 aa10.48□□□□□ -0.73
CDC42BPA-210ENST00000462553 NTSR2O95665 410 aa10.47□□□□□ -0.73
CDC42BPA-210ENST00000462553 ALDH1B1P30837 517 aa10.47□□□□□ -0.73
CDC42BPA-210ENST00000462553 HOXA10P31260 410 aaPredicted RBP10.47□□□□□ -0.73
CDC42BPA-210ENST00000462553 EPHX2P34913 555 aa10.47□□□□□ -0.73
CDC42BPA-210ENST00000462553 VEGFBP49765 207 aa10.47□□□□□ -0.73
CDC42BPA-210ENST00000462553 EAPPQ56P03 285 aaPredicted RBP10.47□□□□□ -0.73
CDC42BPA-210ENST00000462553 LRP10Q7Z4F1 713 aa10.47□□□□□ -0.73
CDC42BPA-210ENST00000462553 SYNE4Q8N205 404 aa10.47□□□□□ -0.73
CDC42BPA-210ENST00000462553 NYXQ9GZU5 481 aa10.47□□□□□ -0.73
CDC42BPA-210ENST00000462553 DUOX1Q9NRD9 1551 aa10.47□□□□□ -0.73
CDC42BPA-210ENST00000462553 TMEM88BA6NKF7 163 aa10.46□□□□□ -0.73
CDC42BPA-210ENST00000462553 GPTP24298 496 aa10.46□□□□□ -0.73
CDC42BPA-210ENST00000462553 NFE2L2Q16236 605 aa10.46□□□□□ -0.73
CDC42BPA-210ENST00000462553 MAP1SQ66K74 1059 aaPredicted RBP10.46□□□□□ -0.73
CDC42BPA-210ENST00000462553 ZNF34Q8IZ26 560 aa10.46□□□□□ -0.73
CDC42BPA-210ENST00000462553 GPC2Q8N158 579 aa10.46□□□□□ -0.73
CDC42BPA-210ENST00000462553 NGEFQ8N5V2 710 aa10.46□□□□□ -0.73
CDC42BPA-210ENST00000462553 ZBTB3Q9H5J0 574 aa10.46□□□□□ -0.73
CDC42BPA-210ENST00000462553 COL4A1P02462 1669 aa10.46□□□□□ -0.74
CDC42BPA-210ENST00000462553 ERBB4Q15303 1308 aa10.45□□□□□ -0.74
CDC42BPA-210ENST00000462553 RASSF10A6NK89 507 aa10.45□□□□□ -0.74
CDC42BPA-210ENST00000462553 MYL6BP14649 208 aa10.45□□□□□ -0.74
CDC42BPA-210ENST00000462553 SCNN1DP51172 638 aa10.45□□□□□ -0.74
CDC42BPA-210ENST00000462553 SUSD4Q5VX71 490 aa10.45□□□□□ -0.74
CDC42BPA-210ENST00000462553 KIF6Q6ZMV9 814 aa10.45□□□□□ -0.74
CDC42BPA-210ENST00000462553 PNISRQ8TF01 805 aaKnown RBP10.45□□□□□ -0.74
CDC42BPA-210ENST00000462553 RRP7AQ9Y3A4 280 aaKnown RBP10.45□□□□□ -0.74
CDC42BPA-210ENST00000462553 TNRC18O15417 2968 aaPredicted RBP10.45□□□□□ -0.74
CDC42BPA-210ENST00000462553 POLR2AP24928 1970 aaKnown RBP10.45□□□□□ -0.74
CDC42BPA-210ENST00000462553 GTF2E1P29083 439 aaPredicted RBP10.44□□□□□ -0.74
CDC42BPA-210ENST00000462553 PDIA6Q15084 440 aa10.44□□□□□ -0.74
CDC42BPA-210ENST00000462553 PROSER3Q2NL68 480 aa10.44□□□□□ -0.74
CDC42BPA-210ENST00000462553 CC2D2BQ6DHV5 1058 aa10.44□□□□□ -0.74
CDC42BPA-210ENST00000462553 GIGYF2Q6Y7W6 1299 aaKnown RBP10.44□□□□□ -0.74
CDC42BPA-210ENST00000462553 PNMA8AQ86V59 439 aaPredicted RBP10.44□□□□□ -0.74
CDC42BPA-210ENST00000462553 CNTROBQ8N137 903 aa10.44□□□□□ -0.74
CDC42BPA-210ENST00000462553 RPGRQ92834 1020 aaKnown RBP10.44□□□□□ -0.74
CDC42BPA-210ENST00000462553 PPEF1O14829 653 aaPredicted RBP10.43□□□□□ -0.74
CDC42BPA-210ENST00000462553 FMR1Q06787 632 aaKnown RBP eCLIP10.43□□□□□ -0.741e-6■■□□□ 13.6
CDC42BPA-210ENST00000462553 CRAMP1Q96RY5 1269 aa10.43□□□□□ -0.74
CDC42BPA-210ENST00000462553 PRDM10Q9NQV6 1147 aa10.43□□□□□ -0.74
CDC42BPA-210ENST00000462553 WBP1LQ9NX94 342 aa10.43□□□□□ -0.74
CDC42BPA-210ENST00000462553 SCN9AQ15858 1988 aa10.43□□□□□ -0.74
CDC42BPA-210ENST00000462553 PSME4Q14997 1843 aa10.42□□□□□ -0.74
CDC42BPA-210ENST00000462553 ABCC4O15439 1325 aa10.42□□□□□ -0.74
CDC42BPA-210ENST00000462553 C19orf67A6NJJ6 358 aa10.42□□□□□ -0.74
CDC42BPA-210ENST00000462553 ANXA1P04083 346 aa10.42□□□□□ -0.74
CDC42BPA-210ENST00000462553 EPS15P42566 896 aa10.42□□□□□ -0.74
CDC42BPA-210ENST00000462553 CCDC184Q52MB2 194 aa10.42□□□□□ -0.74
CDC42BPA-210ENST00000462553 JDP2Q8WYK2 163 aa10.42□□□□□ -0.74
CDC42BPA-210ENST00000462553 GJA3Q9Y6H8 435 aa10.42□□□□□ -0.74
CDC42BPA-210ENST00000462553 CASP8AP2Q9UKL3 1982 aa10.41□□□□□ -0.74
CDC42BPA-210ENST00000462553 MAPK8IP3Q9UPT6 1336 aa10.41□□□□□ -0.74
CDC42BPA-210ENST00000462553 HSPA8P11142 646 aaKnown RBP10.41□□□□□ -0.74
CDC42BPA-210ENST00000462553 CTCFP49711 727 aaPredicted RBP10.41□□□□□ -0.74
CDC42BPA-210ENST00000462553 EIF6P56537 245 aaKnown RBP10.41□□□□□ -0.74
CDC42BPA-210ENST00000462553 GRIPAP1Q4V328 841 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms