RNA–Protein interactions for RNA: ENST00000462523.5

XPA-202, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 5

Gene XPA, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-202ENST00000462523 CCDC191Q8NCU4 936 aa24.41■■□□□ 1.5
XPA-202ENST00000462523 ABCC4O15439 1325 aa24.41■■□□□ 1.5
XPA-202ENST00000462523 IPO8O15397 1037 aaKnown RBP24.4■■□□□ 1.5
XPA-202ENST00000462523 ZKSCAN2Q63HK3 967 aa24.4■■□□□ 1.5
XPA-202ENST00000462523 NUTM1Q86Y26 1132 aa24.4■■□□□ 1.5
XPA-202ENST00000462523 SYNE4Q8N205 404 aa24.4■■□□□ 1.5
XPA-202ENST00000462523 ABCC12Q96J65 1359 aa24.4■■□□□ 1.5
XPA-202ENST00000462523 TNRC6CQ9HCJ0 1690 aaKnown RBP24.4■■□□□ 1.5
XPA-202ENST00000462523 CNBD1Q8NA66 436 aa24.39■■□□□ 1.5
XPA-202ENST00000462523 CWC25Q9NXE8 425 aaPredicted RBP24.39■■□□□ 1.5
XPA-202ENST00000462523 KIAA1551Q9HCM1 1747 aa24.39■■□□□ 1.49
XPA-202ENST00000462523 PLIN1O60240 522 aa24.38■■□□□ 1.49
XPA-202ENST00000462523 PPP1R42Q7Z4L9 355 aa24.38■■□□□ 1.49
XPA-202ENST00000462523 CLUAP1Q96AJ1 413 aa24.38■■□□□ 1.49
XPA-202ENST00000462523 UTP14AQ9BVJ6 771 aaKnown RBP24.38■■□□□ 1.49
XPA-202ENST00000462523 DDX60Q8IY21 1712 aaKnown RBP24.38■■□□□ 1.49
XPA-202ENST00000462523 GCKRQ14397 625 aa24.37■■□□□ 1.49
XPA-202ENST00000462523 ERFEQ4G0M1 354 aa24.37■■□□□ 1.49
XPA-202ENST00000462523 TPTE2Q6XPS3 522 aa24.37■■□□□ 1.49
XPA-202ENST00000462523 GOLGB1Q14789 3259 aaKnown RBP24.37■■□□□ 1.49
XPA-202ENST00000462523 RLBP1P12271 317 aa24.37■■□□□ 1.49
XPA-202ENST00000462523 SRCIN1Q9C0H9 1055 aa24.37■■□□□ 1.49
XPA-202ENST00000462523 NYXQ9GZU5 481 aa24.37■■□□□ 1.49
XPA-202ENST00000462523 TRMT112Q9UI30 125 aaKnown RBP24.37■■□□□ 1.49
XPA-202ENST00000462523 LAMB2P55268 1798 aa24.36■■□□□ 1.49
XPA-202ENST00000462523 JARID2Q92833 1246 aaPredicted RBP24.36■■□□□ 1.49
XPA-202ENST00000462523 FAM89AQ96GI7 184 aa24.36■■□□□ 1.49
XPA-202ENST00000462523 RTL5Q5HYW3 569 aaPredicted RBP24.35■■□□□ 1.49
XPA-202ENST00000462523 ZBTB38Q8NAP3 1195 aaPredicted RBP24.35■■□□□ 1.49
XPA-202ENST00000462523 COL11A2P13942 1736 aaPredicted RBP24.35■■□□□ 1.49
XPA-202ENST00000462523 RNF123Q5XPI4 1314 aa24.34■■□□□ 1.49
XPA-202ENST00000462523 ALDH1L1O75891 902 aa24.34■■□□□ 1.49
XPA-202ENST00000462523 SH3TC1Q8TE82 1336 aa24.34■■□□□ 1.49
XPA-202ENST00000462523 PCCAP05165 728 aaPredicted RBP24.33■■□□□ 1.49
XPA-202ENST00000462523 INTS3Q68E01 1043 aaKnown RBP24.33■■□□□ 1.49
XPA-202ENST00000462523 FHDC1Q9C0D6 1143 aaPredicted RBP24.33■■□□□ 1.49
XPA-202ENST00000462523 H7C1W4 665 aa24.33■■□□□ 1.48
XPA-202ENST00000462523 CASP7P55210 303 aa24.33■■□□□ 1.48
XPA-202ENST00000462523 ST5P78524 1137 aa24.33■■□□□ 1.48
XPA-202ENST00000462523 PPP1R1BQ9UD71 204 aaPredicted RBP24.33■■□□□ 1.48
XPA-202ENST00000462523 RIC1Q4ADV7 1423 aa24.32■■□□□ 1.48
XPA-202ENST00000462523 NPHP1O15259 732 aa24.32■■□□□ 1.48
XPA-202ENST00000462523 CCT4P50991 539 aaKnown RBP24.32■■□□□ 1.48
XPA-202ENST00000462523 DZIP1LQ8IYY4 767 aaKnown RBP24.32■■□□□ 1.48
XPA-202ENST00000462523 TMEM57Q8N5G2 664 aa24.32■■□□□ 1.48
XPA-202ENST00000462523 GTF2E1P29083 439 aaPredicted RBP24.31■■□□□ 1.48
XPA-202ENST00000462523 SLC10A5Q5PT55 438 aa24.31■■□□□ 1.48
XPA-202ENST00000462523 C20orf194Q5TEA3 1177 aa24.31■■□□□ 1.48
XPA-202ENST00000462523 C3orf67Q6ZVT6 689 aa24.31■■□□□ 1.48
XPA-202ENST00000462523 KLHL34Q8N239 644 aa24.31■■□□□ 1.48
XPA-202ENST00000462523 PANK1Q8TE04 598 aa24.31■■□□□ 1.48
XPA-202ENST00000462523 BRIP1Q9BX63 1249 aa24.31■■□□□ 1.48
XPA-202ENST00000462523 CD2APQ9Y5K6 639 aa24.31■■□□□ 1.48
XPA-202ENST00000462523 HCLS1P14317 486 aaPredicted RBP24.3■■□□□ 1.48
XPA-202ENST00000462523 UBE3BQ7Z3V4 1068 aa24.3■■□□□ 1.48
XPA-202ENST00000462523 DLEC1Q9Y238 1755 aa24.3■■□□□ 1.48
XPA-202ENST00000462523 GRM8O00222 908 aa24.29■■□□□ 1.48
XPA-202ENST00000462523 RRP1P56182 461 aaKnown RBP24.29■■□□□ 1.48
XPA-202ENST00000462523 NLGN2Q8NFZ4 835 aa24.29■■□□□ 1.48
XPA-202ENST00000462523 USP44Q9H0E7 712 aa24.29■■□□□ 1.48
XPA-202ENST00000462523 UTYO14607 1347 aa24.29■■□□□ 1.48
XPA-202ENST00000462523 CDHR2Q9BYE9 1310 aa24.29■■□□□ 1.48
XPA-202ENST00000462523 IRS4O14654 1257 aaPredicted RBP24.29■■□□□ 1.48
XPA-202ENST00000462523 NBPF7P0C2Y1 421 aaPredicted RBP24.29■■□□□ 1.48
XPA-202ENST00000462523 FTSJ3Q8IY81 847 aaKnown RBP24.29■■□□□ 1.48
XPA-202ENST00000462523 KLRG2A4D1S0 409 aaPredicted RBP24.28■■□□□ 1.48
XPA-202ENST00000462523 SYT17Q9BSW7 474 aa24.28■■□□□ 1.48
XPA-202ENST00000462523 BRCA1P38398 1863 aaKnown RBP24.27■■□□□ 1.48
XPA-202ENST00000462523 MYH3P11055 1940 aa24.27■■□□□ 1.48
XPA-202ENST00000462523 CHRNA5P30532 468 aa24.26■■□□□ 1.47
XPA-202ENST00000462523 C9orf78Q9NZ63 289 aaPredicted RBP24.26■■□□□ 1.47
XPA-202ENST00000462523 KCNA3P22001 575 aa24.25■■□□□ 1.47
XPA-202ENST00000462523 CRY2Q49AN0 593 aa24.25■■□□□ 1.47
XPA-202ENST00000462523 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.25■■□□□ 1.47
XPA-202ENST00000462523 A0A0G2JLW4 131 aa24.25■■□□□ 1.47
XPA-202ENST00000462523 PDE6BP35913 854 aa24.25■■□□□ 1.47
XPA-202ENST00000462523 TGFB2P61812 414 aa24.25■■□□□ 1.47
XPA-202ENST00000462523 KAZALD1Q96I82 304 aa24.25■■□□□ 1.47
XPA-202ENST00000462523 MEIS3Q99687 375 aa24.25■■□□□ 1.47
XPA-202ENST00000462523 SUPT16HQ9Y5B9 1047 aaKnown RBP24.25■■□□□ 1.47
XPA-202ENST00000462523 DPEP1P16444 411 aa24.24■■□□□ 1.47
XPA-202ENST00000462523 PDE3AQ14432 1141 aa24.24■■□□□ 1.47
XPA-202ENST00000462523 COL4A1P02462 1669 aa24.24■■□□□ 1.47
XPA-202ENST00000462523 SRGNP10124 158 aa24.23■■□□□ 1.47
XPA-202ENST00000462523 C2CD5Q86YS7 1000 aa24.23■■□□□ 1.47
XPA-202ENST00000462523 ITPRIPQ8IWB1 547 aa24.23■■□□□ 1.47
XPA-202ENST00000462523 NLRP3Q96P20 1036 aa24.23■■□□□ 1.47
XPA-202ENST00000462523 PLA2G12BQ9BX93 195 aa24.23■■□□□ 1.47
XPA-202ENST00000462523 PDE8AO60658 829 aa24.22■■□□□ 1.47
XPA-202ENST00000462523 EPHA10Q5JZY3 1008 aa24.22■■□□□ 1.47
XPA-202ENST00000462523 SUCLG2Q96I99 432 aa24.22■■□□□ 1.47
XPA-202ENST00000462523 COG6Q9Y2V7 657 aa24.22■■□□□ 1.47
XPA-202ENST00000462523 TAF1P21675 1872 aa24.22■■□□□ 1.47
XPA-202ENST00000462523 MS4A1P11836 297 aa24.21■■□□□ 1.47
XPA-202ENST00000462523 FOXO4P98177 505 aa24.21■■□□□ 1.47
XPA-202ENST00000462523 UTRNP46939 3433 aa24.21■■□□□ 1.47
XPA-202ENST00000462523 MVPQ14764 893 aaKnown RBP24.2■■□□□ 1.47
XPA-202ENST00000462523 CACNA1SQ13698 1873 aa24.2■■□□□ 1.47
XPA-202ENST00000462523 H0YIN7 160 aa24.2■■□□□ 1.46
XPA-202ENST00000462523 CTSWP56202 376 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms