RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 PTK2Q05397 1052 aa8.19□□□□□ -1.1
VPS36-202ENST00000462289 BRINP3Q76B58 766 aa8.19□□□□□ -1.1
VPS36-202ENST00000462289 ZBTB33Q86T24 672 aa8.19□□□□□ -1.1
VPS36-202ENST00000462289 EPS8L1Q8TE68 723 aa8.19□□□□□ -1.1
VPS36-202ENST00000462289 TESK2Q96S53 571 aa8.19□□□□□ -1.1
VPS36-202ENST00000462289 HMX1Q9NP08 348 aaPredicted RBP8.19□□□□□ -1.1
VPS36-202ENST00000462289 PGPEP1Q9NXJ5 209 aa8.19□□□□□ -1.1
VPS36-202ENST00000462289 DNMT3LQ9UJW3 386 aa8.19□□□□□ -1.1
VPS36-202ENST00000462289 CRYBG1Q9Y4K1 1723 aa8.19□□□□□ -1.1
VPS36-202ENST00000462289 USP54Q70EL1 1684 aa8.18□□□□□ -1.1
VPS36-202ENST00000462289 USP17L8P0C7I0 530 aa8.18□□□□□ -1.1
VPS36-202ENST00000462289 DHX9Q08211 1270 aaKnown RBP8.18□□□□□ -1.1
VPS36-202ENST00000462289 CCER1Q8TC90 406 aaPredicted RBP8.18□□□□□ -1.1
VPS36-202ENST00000462289 PUS7Q96PZ0 661 aaKnown RBP8.18□□□□□ -1.1
VPS36-202ENST00000462289 STK26Q9P289 416 aa8.18□□□□□ -1.1
VPS36-202ENST00000462289 TRAK1Q9UPV9 953 aa8.18□□□□□ -1.1
VPS36-202ENST00000462289 PRR36Q9H6K5 1346 aa8.18□□□□□ -1.1
VPS36-202ENST00000462289 CENPJQ9HC77 1338 aaPredicted RBP8.18□□□□□ -1.1
VPS36-202ENST00000462289 POLR3AO14802 1390 aaPredicted RBP8.18□□□□□ -1.1
VPS36-202ENST00000462289 EIF3AQ14152 1382 aaKnown RBP8.18□□□□□ -1.1
VPS36-202ENST00000462289 NRKQ7Z2Y5 1582 aa8.18□□□□□ -1.1
VPS36-202ENST00000462289 MON2Q7Z3U7 1717 aa8.17□□□□□ -1.1
VPS36-202ENST00000462289 WASLO00401 505 aaPredicted RBP8.17□□□□□ -1.1
VPS36-202ENST00000462289 SLC24A1O60721 1099 aa8.17□□□□□ -1.1
VPS36-202ENST00000462289 RFC5P40937 340 aa8.17□□□□□ -1.1
VPS36-202ENST00000462289 INTS6LQ5JSJ4 861 aaKnown RBP8.17□□□□□ -1.1
VPS36-202ENST00000462289 ZSCAN1Q8NBB4 408 aa8.17□□□□□ -1.1
VPS36-202ENST00000462289 ADAM32Q8TC27 787 aa8.17□□□□□ -1.1
VPS36-202ENST00000462289 MYOM1P52179 1685 aa8.17□□□□□ -1.1
VPS36-202ENST00000462289 PPFIA3O75145 1194 aa8.16□□□□□ -1.1
VPS36-202ENST00000462289 ATF3P18847 181 aa8.16□□□□□ -1.1
VPS36-202ENST00000462289 MED1Q15648 1581 aaPredicted RBP8.16□□□□□ -1.1
VPS36-202ENST00000462289 SSH2Q76I76 1423 aa8.16□□□□□ -1.1
VPS36-202ENST00000462289 PNMA1Q8ND90 353 aa8.16□□□□□ -1.1
VPS36-202ENST00000462289 USP47Q96K76 1375 aa8.16□□□□□ -1.1
VPS36-202ENST00000462289 ABCA3Q99758 1704 aa8.16□□□□□ -1.1
VPS36-202ENST00000462289 MARF1Q9Y4F3 1742 aaKnown RBP8.16□□□□□ -1.1
VPS36-202ENST00000462289 SPINT1O43278 529 aa8.15□□□□□ -1.1
VPS36-202ENST00000462289 CBLBQ13191 982 aa8.15□□□□□ -1.1
VPS36-202ENST00000462289 CARD11Q9BXL7 1154 aa8.15□□□□□ -1.1
VPS36-202ENST00000462289 CD163L1Q9NR16 1453 aa8.14□□□□□ -1.11
VPS36-202ENST00000462289 CPSF1Q10570 1443 aaKnown RBP8.14□□□□□ -1.11
VPS36-202ENST00000462289 FAM181BA6NEQ2 426 aa8.14□□□□□ -1.11
VPS36-202ENST00000462289 TTLL8A6PVC2 850 aa8.14□□□□□ -1.11
VPS36-202ENST00000462289 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.14□□□□□ -1.11
VPS36-202ENST00000462289 NBPF20Q3BBV1 942 aa8.14□□□□□ -1.11
VPS36-202ENST00000462289 SBNO1A3KN83 1393 aa8.13□□□□□ -1.11
VPS36-202ENST00000462289 BRD4O60885 1362 aaPredicted RBP8.13□□□□□ -1.11
VPS36-202ENST00000462289 HSPA1LP34931 641 aa8.13□□□□□ -1.11
VPS36-202ENST00000462289 ORAI2Q96SN7 254 aa8.13□□□□□ -1.11
VPS36-202ENST00000462289 TRIM34Q9BYJ4 488 aa8.13□□□□□ -1.11
VPS36-202ENST00000462289 POGKQ9P215 609 aa8.13□□□□□ -1.11
VPS36-202ENST00000462289 TMEM259Q4ZIN3 620 aa8.12□□□□□ -1.11
VPS36-202ENST00000462289 ATAD2Q6PL18 1390 aa8.11□□□□□ -1.11
VPS36-202ENST00000462289 NINLQ9Y2I6 1382 aa8.11□□□□□ -1.11
VPS36-202ENST00000462289 NPHP3Q7Z494 1330 aa8.11□□□□□ -1.11
VPS36-202ENST00000462289 ST20-MTHFSA0A0A6YYL1 179 aa8.11□□□□□ -1.11
VPS36-202ENST00000462289 ESPNB1AK53 854 aa8.11□□□□□ -1.11
VPS36-202ENST00000462289 C14orf37Q86TY3 774 aa8.11□□□□□ -1.11
VPS36-202ENST00000462289 NUDT16Q96DE0 195 aaKnown RBP8.11□□□□□ -1.11
VPS36-202ENST00000462289 PCMTD1Q96MG8 357 aaPredicted RBP8.11□□□□□ -1.11
VPS36-202ENST00000462289 CDK19Q9BWU1 502 aa8.11□□□□□ -1.11
VPS36-202ENST00000462289 PIK3C2AO00443 1686 aa8.11□□□□□ -1.11
VPS36-202ENST00000462289 PNPLA6Q8IY17 1366 aa8.1□□□□□ -1.11
VPS36-202ENST00000462289 JCADQ9P266 1359 aa8.1□□□□□ -1.11
VPS36-202ENST00000462289 DISP3Q9P2K9 1392 aa8.1□□□□□ -1.11
VPS36-202ENST00000462289 EVC2Q86UK5 1308 aa8.1□□□□□ -1.11
VPS36-202ENST00000462289 PTSQ03393 145 aa8.1□□□□□ -1.11
VPS36-202ENST00000462289 SAFB2Q14151 953 aaKnown RBP eCLIP8.1□□□□□ -1.11
VPS36-202ENST00000462289 HIRIP3Q9BW71 556 aaPredicted RBP8.1□□□□□ -1.11
VPS36-202ENST00000462289 USP6P35125 1406 aa8.1□□□□□ -1.11
VPS36-202ENST00000462289 TNS3Q68CZ2 1445 aa8.1□□□□□ -1.11
VPS36-202ENST00000462289 PPIP5K1Q6PFW1 1433 aa8.1□□□□□ -1.11
VPS36-202ENST00000462289 LRP6O75581 1613 aa8.1□□□□□ -1.11
VPS36-202ENST00000462289 PHRF1Q9P1Y6 1649 aaKnown RBP8.1□□□□□ -1.11
VPS36-202ENST00000462289 SPATA31A3Q5VYP0 1347 aa8.09□□□□□ -1.11
VPS36-202ENST00000462289 PIP4K2BP78356 416 aa8.09□□□□□ -1.11
VPS36-202ENST00000462289 SEPT12Q8IYM1 358 aa8.09□□□□□ -1.11
VPS36-202ENST00000462289 ZNF784Q8NCA9 323 aaPredicted RBP8.09□□□□□ -1.11
VPS36-202ENST00000462289 NANOS1Q8WY41 292 aaKnown RBP8.09□□□□□ -1.11
VPS36-202ENST00000462289 GJD4Q96KN9 370 aaPredicted RBP8.09□□□□□ -1.11
VPS36-202ENST00000462289 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.09□□□□□ -1.11
VPS36-202ENST00000462289 SLIT3O75094 1523 aa8.08□□□□□ -1.12
VPS36-202ENST00000462289 SPATA31A6Q5VVP1 1343 aa8.08□□□□□ -1.12
VPS36-202ENST00000462289 ERVH48-1M5A8F1 160 aa8.08□□□□□ -1.12
VPS36-202ENST00000462289 LILRA1O75019 489 aa8.08□□□□□ -1.12
VPS36-202ENST00000462289 NEUROD2Q15784 382 aa8.08□□□□□ -1.12
VPS36-202ENST00000462289 ESCO1Q5FWF5 840 aa8.08□□□□□ -1.12
VPS36-202ENST00000462289 DZIP3Q86Y13 1208 aaKnown RBP8.08□□□□□ -1.12
VPS36-202ENST00000462289 AGBL1Q96MI9 1066 aa8.08□□□□□ -1.12
VPS36-202ENST00000462289 TMPRSS4Q9NRS4 437 aa8.08□□□□□ -1.12
VPS36-202ENST00000462289 NWD2Q9ULI1 1742 aa8.07□□□□□ -1.12
VPS36-202ENST00000462289 SLC35F4A4IF30 521 aa8.07□□□□□ -1.12
VPS36-202ENST00000462289 FOXO3O43524 673 aa8.07□□□□□ -1.12
VPS36-202ENST00000462289 CTSOP43234 321 aaPredicted RBP8.07□□□□□ -1.12
VPS36-202ENST00000462289 KDF1Q8NAX2 398 aaPredicted RBP8.07□□□□□ -1.12
VPS36-202ENST00000462289 DDX17Q92841 729 aaKnown RBP8.07□□□□□ -1.12
VPS36-202ENST00000462289 LRRC59Q96AG4 307 aaKnown RBP8.07□□□□□ -1.12
VPS36-202ENST00000462289 COL18A1P39060 1754 aa8.07□□□□□ -1.12
VPS36-202ENST00000462289 ANKRD26Q9UPS8 1709 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms