RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 TRIM66O15016 1216 aa7.44□□□□□ -1.22
BRCA1-206ENST00000461574 PER1O15534 1290 aaPredicted RBP7.44□□□□□ -1.22
BRCA1-206ENST00000461574 EVA1CP58658 441 aa7.44□□□□□ -1.22
BRCA1-206ENST00000461574 SCARF1Q14162 830 aa7.44□□□□□ -1.22
BRCA1-206ENST00000461574 CSPP1Q1MSJ5 1256 aa7.44□□□□□ -1.22
BRCA1-206ENST00000461574 C4orf48Q5BLP8 95 aa7.44□□□□□ -1.22
BRCA1-206ENST00000461574 CFAP70Q5T0N1 1121 aa7.44□□□□□ -1.22
BRCA1-206ENST00000461574 RIC3Q7Z5B4 369 aa7.44□□□□□ -1.22
BRCA1-206ENST00000461574 CDK15Q96Q40 435 aa7.44□□□□□ -1.22
BRCA1-206ENST00000461574 CAMKK2Q96RR4 588 aa7.44□□□□□ -1.22
BRCA1-206ENST00000461574 HIRIP3Q9BW71 556 aaPredicted RBP7.44□□□□□ -1.22
BRCA1-206ENST00000461574 ZBTB3Q9H5J0 574 aa7.44□□□□□ -1.22
BRCA1-206ENST00000461574 ZFAND3Q9H8U3 227 aa7.44□□□□□ -1.22
BRCA1-206ENST00000461574 SPON1Q9HCB6 807 aa7.44□□□□□ -1.22
BRCA1-206ENST00000461574 SPATA31A1Q5TZJ5 1347 aa7.44□□□□□ -1.22
BRCA1-206ENST00000461574 KIAA0232Q92628 1395 aa7.44□□□□□ -1.22
BRCA1-206ENST00000461574 NINLQ9Y2I6 1382 aa7.44□□□□□ -1.22
BRCA1-206ENST00000461574 CHRNA2Q15822 529 aa7.43□□□□□ -1.22
BRCA1-206ENST00000461574 C14orf93Q9H972 538 aaKnown RBP7.43□□□□□ -1.22
BRCA1-206ENST00000461574 PARP4Q9UKK3 1724 aaKnown RBP7.42□□□□□ -1.22
BRCA1-206ENST00000461574 RGPD3A6NKT7 1758 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-206ENST00000461574 RGPD4Q7Z3J3 1758 aa7.42□□□□□ -1.22
BRCA1-206ENST00000461574 FAM181BA6NEQ2 426 aa7.42□□□□□ -1.22
BRCA1-206ENST00000461574 ZIC2O95409 532 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-206ENST00000461574 NR3C2P08235 984 aa7.42□□□□□ -1.22
BRCA1-206ENST00000461574 PRPF38BQ5VTL8 546 aaKnown RBP7.42□□□□□ -1.22
BRCA1-206ENST00000461574 ITPKCQ96DU7 683 aa7.42□□□□□ -1.22
BRCA1-206ENST00000461574 ATP7BP35670 1465 aa7.42□□□□□ -1.22
BRCA1-206ENST00000461574 NRKQ7Z2Y5 1582 aa7.42□□□□□ -1.22
BRCA1-206ENST00000461574 KCNQ2O43526 872 aa7.41□□□□□ -1.22
BRCA1-206ENST00000461574 GRM5P41594 1212 aa7.41□□□□□ -1.22
BRCA1-206ENST00000461574 ZC3H6P61129 1189 aaKnown RBP7.41□□□□□ -1.22
BRCA1-206ENST00000461574 AGERQ15109 404 aa7.41□□□□□ -1.22
BRCA1-206ENST00000461574 MPHOSPH9Q99550 1183 aa7.41□□□□□ -1.22
BRCA1-206ENST00000461574 TRAK1Q9UPV9 953 aa7.41□□□□□ -1.22
BRCA1-206ENST00000461574 AKAP12Q02952 1782 aa7.41□□□□□ -1.22
BRCA1-206ENST00000461574 CHD4Q14839 1912 aa7.4□□□□□ -1.22
BRCA1-206ENST00000461574 NR5A1Q13285 461 aa7.4□□□□□ -1.22
BRCA1-206ENST00000461574 C6orf118Q5T5N4 469 aa7.4□□□□□ -1.22
BRCA1-206ENST00000461574 NUTM2GQ5VZR2 741 aa7.4□□□□□ -1.22
BRCA1-206ENST00000461574 TSC1Q92574 1164 aa7.4□□□□□ -1.22
BRCA1-206ENST00000461574 LIMD1Q9UGP4 676 aa7.4□□□□□ -1.22
BRCA1-206ENST00000461574 PRR36Q9H6K5 1346 aa7.4□□□□□ -1.22
BRCA1-206ENST00000461574 SSH2Q76I76 1423 aa7.4□□□□□ -1.22
BRCA1-206ENST00000461574 MYOM1P52179 1685 aa7.4□□□□□ -1.23
BRCA1-206ENST00000461574 ARHGEF28Q8N1W1 1705 aaKnown RBP7.4□□□□□ -1.23
BRCA1-206ENST00000461574 SBF2Q86WG5 1849 aa7.4□□□□□ -1.23
BRCA1-206ENST00000461574 CASZ1Q86V15 1759 aa7.39□□□□□ -1.23
BRCA1-206ENST00000461574 ADGRB1O14514 1584 aa7.39□□□□□ -1.23
BRCA1-206ENST00000461574 OVOS2A0A0G2JMS6 1433 aa7.39□□□□□ -1.23
BRCA1-206ENST00000461574 OVOS2A0A0J9YW53 1432 aa7.39□□□□□ -1.23
BRCA1-206ENST00000461574 OVOS2Q6IE36 1432 aa7.39□□□□□ -1.23
BRCA1-206ENST00000461574 SENP3-EIF4A1A0A087X0R7 540 aa7.39□□□□□ -1.23
BRCA1-206ENST00000461574 WASLO00401 505 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-206ENST00000461574 QPCTQ16769 361 aa7.39□□□□□ -1.23
BRCA1-206ENST00000461574 BPHLQ86WA6 291 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-206ENST00000461574 TCP11L2Q8N4U5 519 aa7.39□□□□□ -1.23
BRCA1-206ENST00000461574 AK7Q96M32 723 aa7.39□□□□□ -1.23
BRCA1-206ENST00000461574 WNK3Q9BYP7 1800 aa7.38□□□□□ -1.23
BRCA1-206ENST00000461574 TOPAZ1Q8N9V7 1692 aa7.38□□□□□ -1.23
BRCA1-206ENST00000461574 LMO7Q8WWI1 1683 aa7.38□□□□□ -1.23
BRCA1-206ENST00000461574 LRRC37A3O60309 1634 aa7.38□□□□□ -1.23
BRCA1-206ENST00000461574 ZBTB7CA1YPR0 619 aa7.38□□□□□ -1.23
BRCA1-206ENST00000461574 MYSM1Q5VVJ2 828 aa7.38□□□□□ -1.23
BRCA1-206ENST00000461574 LARP1Q6PKG0 1096 aaKnown RBP7.38□□□□□ -1.23
BRCA1-206ENST00000461574 CEP350Q5VT06 3117 aa7.37□□□□□ -1.23
BRCA1-206ENST00000461574 UTRNP46939 3433 aa7.37□□□□□ -1.23
BRCA1-206ENST00000461574 MAN1A2O60476 641 aa7.37□□□□□ -1.23
BRCA1-206ENST00000461574 VSIG8P0DPA2 414 aa7.37□□□□□ -1.23
BRCA1-206ENST00000461574 ABTB2Q8N961 1025 aa7.37□□□□□ -1.23
BRCA1-206ENST00000461574 THRAP3Q9Y2W1 955 aaKnown RBP7.37□□□□□ -1.23
BRCA1-206ENST00000461574 PEAK1Q9H792 1746 aa7.36□□□□□ -1.23
BRCA1-206ENST00000461574 LILRB3O75022 631 aa7.36□□□□□ -1.23
BRCA1-206ENST00000461574 ZBTB7AO95365 584 aa7.36□□□□□ -1.23
BRCA1-206ENST00000461574 BMP2P12643 396 aa7.36□□□□□ -1.23
BRCA1-206ENST00000461574 ZNF784Q8NCA9 323 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-206ENST00000461574 NUDT16Q96DE0 195 aaKnown RBP7.36□□□□□ -1.23
BRCA1-206ENST00000461574 C1QTNF2Q9BXJ5 285 aa7.36□□□□□ -1.23
BRCA1-206ENST00000461574 COL5A2P05997 1499 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-206ENST00000461574 CRB1P82279 1406 aa7.35□□□□□ -1.23
BRCA1-206ENST00000461574 CPDO75976 1380 aa7.35□□□□□ -1.23
BRCA1-206ENST00000461574 ACEP12821 1306 aa7.35□□□□□ -1.23
BRCA1-206ENST00000461574 DDB1Q16531 1140 aa7.35□□□□□ -1.23
BRCA1-206ENST00000461574 RTL5Q5HYW3 569 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-206ENST00000461574 SH3RF1Q7Z6J0 888 aa7.35□□□□□ -1.23
BRCA1-206ENST00000461574 LINC00528Q8N1L1 170 aa7.35□□□□□ -1.23
BRCA1-206ENST00000461574 MEIOBQ8N635 442 aa7.35□□□□□ -1.23
BRCA1-206ENST00000461574 GOLGB1Q14789 3259 aaKnown RBP7.34□□□□□ -1.23
BRCA1-206ENST00000461574 FSHRP23945 695 aa7.34□□□□□ -1.23
BRCA1-206ENST00000461574 PDE4DQ08499 809 aa7.34□□□□□ -1.23
BRCA1-206ENST00000461574 TUSC1Q2TAM9 212 aa7.34□□□□□ -1.23
BRCA1-206ENST00000461574 SH3BP5LQ7L8J4 393 aa7.34□□□□□ -1.23
BRCA1-206ENST00000461574 NLRP13Q86W25 1043 aa7.34□□□□□ -1.23
BRCA1-206ENST00000461574 ARMC2Q8NEN0 867 aa7.34□□□□□ -1.23
BRCA1-206ENST00000461574 DCAF11Q8TEB1 546 aa7.34□□□□□ -1.23
BRCA1-206ENST00000461574 STK32BQ9NY57 414 aa7.34□□□□□ -1.23
BRCA1-206ENST00000461574 POLR3AO14802 1390 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-206ENST00000461574 QRICH2Q9H0J4 1663 aa7.33□□□□□ -1.24
BRCA1-206ENST00000461574 PLSCR1O15162 318 aa7.33□□□□□ -1.24
BRCA1-206ENST00000461574 PPFIA3O75145 1194 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms