RNA–Protein interactions for RNA: ENST00000461489.1

COL21A1-205, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 4

Gene COL21A1, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-205ENST00000461489 GATA4P43694 442 aa8.41□□□□□ -1.06
COL21A1-205ENST00000461489 DPYDQ12882 1025 aa8.41□□□□□ -1.06
COL21A1-205ENST00000461489 C8orf86Q6ZUL3 223 aa8.41□□□□□ -1.06
COL21A1-205ENST00000461489 MICALL1Q8N3F8 863 aa8.41□□□□□ -1.06
COL21A1-205ENST00000461489 A6NJR5 290 aa8.4□□□□□ -1.06
COL21A1-205ENST00000461489 APBA3O96018 575 aa8.4□□□□□ -1.06
COL21A1-205ENST00000461489 LMOD1P29536 600 aaPredicted RBP8.4□□□□□ -1.06
COL21A1-205ENST00000461489 PTK7Q13308 1070 aa8.4□□□□□ -1.06
COL21A1-205ENST00000461489 DOC2BQ14184 412 aa8.4□□□□□ -1.06
COL21A1-205ENST00000461489 RTN1Q16799 776 aa8.4□□□□□ -1.06
COL21A1-205ENST00000461489 UBE2OQ9C0C9 1292 aaKnown RBP8.4□□□□□ -1.06
COL21A1-205ENST00000461489 IGFLR1Q9H665 355 aa8.4□□□□□ -1.06
COL21A1-205ENST00000461489 VRTNQ9H8Y1 702 aa8.4□□□□□ -1.06
COL21A1-205ENST00000461489 PRDM6Q9NQX0 595 aa8.4□□□□□ -1.06
COL21A1-205ENST00000461489 USP17L15C9J2P7 530 aa8.39□□□□□ -1.07
COL21A1-205ENST00000461489 USP17L10C9JJH3 530 aa8.39□□□□□ -1.07
COL21A1-205ENST00000461489 USP17L13C9JLJ4 530 aa8.39□□□□□ -1.07
COL21A1-205ENST00000461489 USP17L12C9JPN9 530 aa8.39□□□□□ -1.07
COL21A1-205ENST00000461489 USP17L11C9JVI0 530 aa8.39□□□□□ -1.07
COL21A1-205ENST00000461489 USP17L21D6R901 530 aa8.39□□□□□ -1.07
COL21A1-205ENST00000461489 USP17L18D6R9N7 530 aa8.39□□□□□ -1.07
COL21A1-205ENST00000461489 USP17L22D6RA61 530 aa8.39□□□□□ -1.07
COL21A1-205ENST00000461489 USP17L17D6RBQ6 530 aa8.39□□□□□ -1.07
COL21A1-205ENST00000461489 USP17L19D6RCP7 530 aa8.39□□□□□ -1.07
COL21A1-205ENST00000461489 USP17L20D6RJB6 530 aa8.39□□□□□ -1.07
COL21A1-205ENST00000461489 FAM229AH3BQW9 127 aa8.39□□□□□ -1.07
COL21A1-205ENST00000461489 USP17L24Q0WX57 530 aa8.39□□□□□ -1.07
COL21A1-205ENST00000461489 TRIM28Q13263 835 aaKnown RBP8.39□□□□□ -1.07
COL21A1-205ENST00000461489 KANK4Q5T7N3 995 aaPredicted RBP8.39□□□□□ -1.07
COL21A1-205ENST00000461489 ANKMY2Q8IV38 441 aa8.39□□□□□ -1.07
COL21A1-205ENST00000461489 FAM196BA6NMK8 535 aa8.38□□□□□ -1.07
COL21A1-205ENST00000461489 IGFBP4P22692 258 aa8.38□□□□□ -1.07
COL21A1-205ENST00000461489 COL9A3Q14050 684 aaPredicted RBP8.38□□□□□ -1.07
COL21A1-205ENST00000461489 IER5Q5VY09 327 aa8.38□□□□□ -1.07
COL21A1-205ENST00000461489 PNMA5Q96PV4 448 aa8.38□□□□□ -1.07
COL21A1-205ENST00000461489 TGFBR3LH3BV60 316 aa8.37□□□□□ -1.07
COL21A1-205ENST00000461489 LILRB5O75023 590 aa8.37□□□□□ -1.07
COL21A1-205ENST00000461489 NID1P14543 1247 aa8.37□□□□□ -1.07
COL21A1-205ENST00000461489 C20orf204Q6ZNR8 217 aa8.37□□□□□ -1.07
COL21A1-205ENST00000461489 TRAPPC3LQ5T215 181 aa8.36□□□□□ -1.07
COL21A1-205ENST00000461489 XP32Q5T750 250 aa8.36□□□□□ -1.07
COL21A1-205ENST00000461489 NACC1Q96RE7 527 aa8.36□□□□□ -1.07
COL21A1-205ENST00000461489 SEMA6BQ9H3T3 888 aa8.36□□□□□ -1.07
COL21A1-205ENST00000461489 EFCC1Q9HA90 598 aa8.36□□□□□ -1.07
COL21A1-205ENST00000461489 SLC6A14Q9UN76 642 aa8.36□□□□□ -1.07
COL21A1-205ENST00000461489 EPB42P16452 691 aa8.35□□□□□ -1.07
COL21A1-205ENST00000461489 NFKB1P19838 968 aa8.35□□□□□ -1.07
COL21A1-205ENST00000461489 CCINQ13939 588 aa8.35□□□□□ -1.07
COL21A1-205ENST00000461489 GSX2Q9BZM3 304 aa8.35□□□□□ -1.07
COL21A1-205ENST00000461489 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.35□□□□□ -1.07
COL21A1-205ENST00000461489 GRIK4Q16099 956 aa8.34□□□□□ -1.07
COL21A1-205ENST00000461489 NUDT8Q8WV74 236 aa8.34□□□□□ -1.07
COL21A1-205ENST00000461489 VTI1AQ96AJ9 217 aa8.34□□□□□ -1.07
COL21A1-205ENST00000461489 JPH1Q9HDC5 661 aaPredicted RBP8.34□□□□□ -1.07
COL21A1-205ENST00000461489 DNAJB12Q9NXW2 375 aaKnown RBP8.34□□□□□ -1.07
COL21A1-205ENST00000461489 KLK14Q9P0G3 267 aa8.34□□□□□ -1.07
COL21A1-205ENST00000461489 BCS1LQ9Y276 419 aa8.34□□□□□ -1.07
COL21A1-205ENST00000461489 DMGDHQ9UI17 866 aaKnown RBP8.33□□□□□ -1.08
COL21A1-205ENST00000461489 IDH3AP50213 366 aa8.32□□□□□ -1.08
COL21A1-205ENST00000461489 DGKZQ13574 1117 aa8.32□□□□□ -1.08
COL21A1-205ENST00000461489 ARXQ96QS3 562 aa8.32□□□□□ -1.08
COL21A1-205ENST00000461489 FOXO3O43524 673 aa8.31□□□□□ -1.08
COL21A1-205ENST00000461489 RAC1P63000 192 aa8.31□□□□□ -1.08
COL21A1-205ENST00000461489 PSAPL1Q6NUJ1 521 aa8.31□□□□□ -1.08
COL21A1-205ENST00000461489 Q8N3U1 123 aa8.31□□□□□ -1.08
COL21A1-205ENST00000461489 A0A0A0MRY4 1105 aa8.3□□□□□ -1.08
COL21A1-205ENST00000461489 RGS9O75916 674 aaPredicted RBP8.3□□□□□ -1.08
COL21A1-205ENST00000461489 WEE1P30291 646 aa8.3□□□□□ -1.08
COL21A1-205ENST00000461489 INPP5BP32019 993 aa8.3□□□□□ -1.08
COL21A1-205ENST00000461489 ARSDP51689 593 aa8.3□□□□□ -1.08
COL21A1-205ENST00000461489 CDCA8Q53HL2 280 aa8.3□□□□□ -1.08
COL21A1-205ENST00000461489 CFAP70Q5T0N1 1121 aa8.3□□□□□ -1.08
COL21A1-205ENST00000461489 KRT25Q7Z3Z0 450 aa8.3□□□□□ -1.08
COL21A1-205ENST00000461489 FAM200AQ8TCP9 573 aa8.3□□□□□ -1.08
COL21A1-205ENST00000461489 QTRT2Q9H974 415 aaKnown RBP8.3□□□□□ -1.08
COL21A1-205ENST00000461489 TPSG1Q9NRR2 321 aa8.3□□□□□ -1.08
COL21A1-205ENST00000461489 ZNF777Q9ULD5 760 aaPredicted RBP8.3□□□□□ -1.08
COL21A1-205ENST00000461489 RFX1P22670 979 aa8.29□□□□□ -1.08
COL21A1-205ENST00000461489 ITGB7P26010 798 aa8.29□□□□□ -1.08
COL21A1-205ENST00000461489 PCSK7Q16549 785 aa8.29□□□□□ -1.08
COL21A1-205ENST00000461489 RSPO4Q2I0M5 234 aaPredicted RBP8.29□□□□□ -1.08
COL21A1-205ENST00000461489 FAM35AQ86V20 835 aa8.29□□□□□ -1.08
COL21A1-205ENST00000461489 NAGPAQ9UK23 515 aa8.29□□□□□ -1.08
COL21A1-205ENST00000461489 C9orf172C9J069 976 aa8.28□□□□□ -1.08
COL21A1-205ENST00000461489 MICAL2O94851 1124 aa8.28□□□□□ -1.08
COL21A1-205ENST00000461489 CPB1P15086 417 aa8.28□□□□□ -1.08
COL21A1-205ENST00000461489 ELNP15502 786 aa8.28□□□□□ -1.08
COL21A1-205ENST00000461489 GRNP28799 593 aaKnown RBP8.28□□□□□ -1.08
COL21A1-205ENST00000461489 AFF1P51825 1210 aaKnown RBP8.28□□□□□ -1.08
COL21A1-205ENST00000461489 C11orf91Q3C1V1 193 aa8.28□□□□□ -1.08
COL21A1-205ENST00000461489 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.28□□□□□ -1.08
COL21A1-205ENST00000461489 MAP3K6O95382 1288 aa8.27□□□□□ -1.09
COL21A1-205ENST00000461489 NKAPLQ5M9Q1 402 aa8.27□□□□□ -1.09
COL21A1-205ENST00000461489 DMRTC2Q8IXT2 367 aaPredicted RBP8.27□□□□□ -1.09
COL21A1-205ENST00000461489 RARAP10276 462 aa8.26□□□□□ -1.09
COL21A1-205ENST00000461489 SELPP16109 830 aa8.26□□□□□ -1.09
COL21A1-205ENST00000461489 TARSP26639 723 aaKnown RBP8.26□□□□□ -1.09
COL21A1-205ENST00000461489 ZMYM1Q5SVZ6 1142 aa8.26□□□□□ -1.09
COL21A1-205ENST00000461489 DHX32Q7L7V1 743 aaKnown RBP8.26□□□□□ -1.09
COL21A1-205ENST00000461489 IFT43Q96FT9 208 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms