RNA–Protein interactions for RNA: ENST00000461171.1

CD40-203, Transcript of CD40 molecule, humanhuman

TSL 3

Gene CD40, Length 710 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-203ENST00000461171 DDX21Q9NR30 783 aaKnown RBP eCLIP12.62□□□□□ -0.39
CD40-203ENST00000461171 POTECB2RU33 542 aa12.61□□□□□ -0.39
CD40-203ENST00000461171 APAF1O14727 1248 aa12.61□□□□□ -0.39
CD40-203ENST00000461171 GTF2E1P29083 439 aaPredicted RBP12.61□□□□□ -0.39
CD40-203ENST00000461171 ZEB1P37275 1124 aaPredicted RBP12.61□□□□□ -0.39
CD40-203ENST00000461171 FSTL1Q12841 308 aa12.61□□□□□ -0.39
CD40-203ENST00000461171 OLFM4Q6UX06 510 aa12.61□□□□□ -0.39
CD40-203ENST00000461171 XAGE3Q8WTP9 111 aa12.61□□□□□ -0.39
CD40-203ENST00000461171 RNF123Q5XPI4 1314 aa12.61□□□□□ -0.39
CD40-203ENST00000461171 VEGFAP15692 232 aaPredicted RBP12.6□□□□□ -0.39
CD40-203ENST00000461171 ALDH1B1P30837 517 aa12.6□□□□□ -0.39
CD40-203ENST00000461171 APLP1P51693 650 aa12.6□□□□□ -0.39
CD40-203ENST00000461171 FKBP4Q02790 459 aaKnown RBP eCLIP12.6□□□□□ -0.39
CD40-203ENST00000461171 CCDC184Q52MB2 194 aa12.6□□□□□ -0.39
CD40-203ENST00000461171 C3orf67Q6ZVT6 689 aa12.6□□□□□ -0.39
CD40-203ENST00000461171 COPS6Q7L5N1 327 aa12.6□□□□□ -0.39
CD40-203ENST00000461171 C16orf71Q8IYS4 520 aaPredicted RBP12.6□□□□□ -0.39
CD40-203ENST00000461171 NECTIN2Q92692 538 aa12.6□□□□□ -0.39
CD40-203ENST00000461171 MBIPQ9NS73 344 aa12.6□□□□□ -0.39
CD40-203ENST00000461171 CHPF2Q9P2E5 772 aa12.6□□□□□ -0.39
CD40-203ENST00000461171 SLC10A5Q5PT55 438 aa12.59□□□□□ -0.39
CD40-203ENST00000461171 HDGFL1Q5TGJ6 251 aa12.59□□□□□ -0.39
CD40-203ENST00000461171 IFT57Q9NWB7 429 aa12.59□□□□□ -0.39
CD40-203ENST00000461171 LAS1LQ9Y4W2 734 aaKnown RBP12.59□□□□□ -0.39
CD40-203ENST00000461171 HSP90AB3PQ58FF7 597 aa12.58□□□□□ -0.4
CD40-203ENST00000461171 DUSP27Q5VZP5 1158 aa12.58□□□□□ -0.4
CD40-203ENST00000461171 DPY19L2Q6NUT2 758 aa12.58□□□□□ -0.4
CD40-203ENST00000461171 PPP1R42Q7Z4L9 355 aa12.58□□□□□ -0.4
CD40-203ENST00000461171 NLRP10Q86W26 655 aa12.58□□□□□ -0.4
CD40-203ENST00000461171 RTKN2Q8IZC4 609 aa12.58□□□□□ -0.4
CD40-203ENST00000461171 SMC1BQ8NDV3 1235 aa12.58□□□□□ -0.4
CD40-203ENST00000461171 RPGRQ92834 1020 aaKnown RBP12.58□□□□□ -0.4
CD40-203ENST00000461171 CRAMP1Q96RY5 1269 aa12.58□□□□□ -0.4
CD40-203ENST00000461171 UTP14AQ9BVJ6 771 aaKnown RBP12.58□□□□□ -0.4
CD40-203ENST00000461171 LAMB2P55268 1798 aa12.58□□□□□ -0.4
CD40-203ENST00000461171 COL4A5P29400 1685 aa12.57□□□□□ -0.4
CD40-203ENST00000461171 AIMP1Q12904 312 aaKnown RBP12.57□□□□□ -0.4
CD40-203ENST00000461171 TCIRG1Q13488 830 aa12.57□□□□□ -0.4
CD40-203ENST00000461171 CC2D2BQ6DHV5 1058 aa12.57□□□□□ -0.4
CD40-203ENST00000461171 SLC51AQ86UW1 340 aa12.57□□□□□ -0.4
CD40-203ENST00000461171 DNAJC5GQ8N7S2 189 aa12.57□□□□□ -0.4
CD40-203ENST00000461171 L3MBTL3Q96JM7 780 aaPredicted RBP12.57□□□□□ -0.4
CD40-203ENST00000461171 PSMD1Q99460 953 aa12.57□□□□□ -0.4
CD40-203ENST00000461171 ZNF277Q9NRM2 450 aaPredicted RBP12.57□□□□□ -0.4
CD40-203ENST00000461171 DBF4Q9UBU7 674 aaPredicted RBP12.57□□□□□ -0.4
CD40-203ENST00000461171 DDNO94850 711 aaPredicted RBP12.56□□□□□ -0.4
CD40-203ENST00000461171 GNAI1P63096 354 aa12.56□□□□□ -0.4
CD40-203ENST00000461171 CALD1Q05682 793 aaKnown RBP12.56□□□□□ -0.4
CD40-203ENST00000461171 PLBD2Q8NHP8 589 aa12.56□□□□□ -0.4
CD40-203ENST00000461171 ZNF541Q9H0D2 1346 aa12.56□□□□□ -0.4
CD40-203ENST00000461171 DDX60Q8IY21 1712 aaKnown RBP12.55□□□□□ -0.4
CD40-203ENST00000461171 PPEF1O14829 653 aaPredicted RBP12.55□□□□□ -0.4
CD40-203ENST00000461171 IARSP41252 1262 aaKnown RBP12.55□□□□□ -0.4
CD40-203ENST00000461171 RBM17Q96I25 401 aaKnown RBP12.55□□□□□ -0.4
CD40-203ENST00000461171 NLRP3Q96P20 1036 aa12.55□□□□□ -0.4
CD40-203ENST00000461171 ISCA1Q9BUE6 129 aa12.55□□□□□ -0.4
CD40-203ENST00000461171 HYPKQ9NX55 129 aa12.55□□□□□ -0.4
CD40-203ENST00000461171 SH3TC1Q8TE82 1336 aa12.55□□□□□ -0.4
CD40-203ENST00000461171 SCN4AP35499 1836 aa12.55□□□□□ -0.4
CD40-203ENST00000461171 FZD9O00144 591 aa12.54□□□□□ -0.4
CD40-203ENST00000461171 CAPN15O75808 1086 aa12.54□□□□□ -0.4
CD40-203ENST00000461171 GRIPAP1Q4V328 841 aa12.54□□□□□ -0.4
CD40-203ENST00000461171 ANKRD13DQ6ZTN6 518 aa12.54□□□□□ -0.4
CD40-203ENST00000461171 SYNE4Q8N205 404 aa12.54□□□□□ -0.4
CD40-203ENST00000461171 ABCC4O15439 1325 aa12.54□□□□□ -0.4
CD40-203ENST00000461171 LRRC37AA6NMS7 1700 aa12.54□□□□□ -0.4
CD40-203ENST00000461171 ADAMTSL1Q8N6G6 1762 aa12.53□□□□□ -0.4
CD40-203ENST00000461171 ZNF316A6NFI3 1004 aaPredicted RBP12.53□□□□□ -0.4
CD40-203ENST00000461171 HCLS1P14317 486 aaPredicted RBP12.53□□□□□ -0.4
CD40-203ENST00000461171 HTRA3P83110 453 aa12.53□□□□□ -0.4
CD40-203ENST00000461171 CCDC27Q2M243 656 aa12.53□□□□□ -0.4
CD40-203ENST00000461171 C8orf58Q8NAV2 365 aa12.53□□□□□ -0.4
CD40-203ENST00000461171 TRMT112Q9UI30 125 aaKnown RBP12.53□□□□□ -0.4
CD40-203ENST00000461171 ATP6V0A2Q9Y487 856 aa12.53□□□□□ -0.4
CD40-203ENST00000461171 IQCA1LA6NCM1 817 aa12.52□□□□□ -0.41
CD40-203ENST00000461171 POTEIP0CG38 1075 aa12.52□□□□□ -0.41
CD40-203ENST00000461171 POTEJP0CG39 1038 aa12.52□□□□□ -0.41
CD40-203ENST00000461171 TRIM28Q13263 835 aaKnown RBP12.52□□□□□ -0.41
CD40-203ENST00000461171 U3KPZ7 1027 aaPredicted RBP12.52□□□□□ -0.41
CD40-203ENST00000461171 DUOX1Q9NRD9 1551 aa12.52□□□□□ -0.41
CD40-203ENST00000461171 ATP5J2-PTCD1G3V325 749 aa12.51□□□□□ -0.41
CD40-203ENST00000461171 KLRG1Q96E93 195 aa12.51□□□□□ -0.41
CD40-203ENST00000461171 TAF1DQ9H5J8 278 aaPredicted RBP12.51□□□□□ -0.41
CD40-203ENST00000461171 COL4A1P02462 1669 aa12.51□□□□□ -0.41
CD40-203ENST00000461171 ELL2O00472 640 aaPredicted RBP12.5□□□□□ -0.41
CD40-203ENST00000461171 CHADLQ6NUI6 762 aa12.5□□□□□ -0.41
CD40-203ENST00000461171 WWC1Q8IX03 1113 aa12.5□□□□□ -0.41
CD40-203ENST00000461171 GPC2Q8N158 579 aa12.5□□□□□ -0.41
CD40-203ENST00000461171 TSPYL6Q8N831 410 aa12.5□□□□□ -0.41
CD40-203ENST00000461171 JDP2Q8WYK2 163 aa12.5□□□□□ -0.41
CD40-203ENST00000461171 RTFDC1Q9BY42 306 aaPredicted RBP12.5□□□□□ -0.41
CD40-203ENST00000461171 PHAXQ9H814 394 aaKnown RBP12.5□□□□□ -0.41
CD40-203ENST00000461171 MRS2Q9HD23 443 aa12.5□□□□□ -0.41
CD40-203ENST00000461171 SPINK5Q9NQ38 1064 aaPredicted RBP12.5□□□□□ -0.41
CD40-203ENST00000461171 LTBP1Q14766 1721 aa12.5□□□□□ -0.41
CD40-203ENST00000461171 TAF1P21675 1872 aa12.49□□□□□ -0.41
CD40-203ENST00000461171 IL16Q14005 1332 aa12.49□□□□□ -0.41
CD40-203ENST00000461171 TCERG1O14776 1098 aaKnown RBP12.49□□□□□ -0.41
CD40-203ENST00000461171 BBOX1O75936 387 aa12.49□□□□□ -0.41
CD40-203ENST00000461171 GOLGA2Q08379 1002 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms