RNA–Protein interactions for RNA: ENST00000460834.1

LST1-218, leukocyte specific transcript 1, humanhuman

TSL 3

Gene LST1, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-218ENST00000460834 NLRP10Q86W26 655 aa24.65■■□□□ 1.54
LST1-218ENST00000460834 PHAXQ9H814 394 aaKnown RBP24.65■■□□□ 1.54
LST1-218ENST00000460834 HSP90AB3PQ58FF7 597 aa24.64■■□□□ 1.54
LST1-218ENST00000460834 SLC10A5Q5PT55 438 aa24.64■■□□□ 1.54
LST1-218ENST00000460834 C3orf67Q6ZVT6 689 aa24.64■■□□□ 1.54
LST1-218ENST00000460834 PPP1R42Q7Z4L9 355 aa24.64■■□□□ 1.54
LST1-218ENST00000460834 WDR63Q8IWG1 891 aa24.64■■□□□ 1.54
LST1-218ENST00000460834 ZNF526Q8TF50 670 aaPredicted RBP24.63■■□□□ 1.53
LST1-218ENST00000460834 UTP14AQ9BVJ6 771 aaKnown RBP24.63■■□□□ 1.53
LST1-218ENST00000460834 RNF181Q9P0P0 153 aa24.63■■□□□ 1.53
LST1-218ENST00000460834 ISCA1Q9BUE6 129 aa24.62■■□□□ 1.53
LST1-218ENST00000460834 GPBP1L1Q9HC44 474 aaPredicted RBP24.62■■□□□ 1.53
LST1-218ENST00000460834 HOXA10P31260 410 aaPredicted RBP24.61■■□□□ 1.53
LST1-218ENST00000460834 SYNE4Q8N205 404 aa24.61■■□□□ 1.53
LST1-218ENST00000460834 SPINK5Q9NQ38 1064 aaPredicted RBP24.61■■□□□ 1.53
LST1-218ENST00000460834 LMNB1P20700 586 aa24.6■■□□□ 1.53
LST1-218ENST00000460834 DDX60Q8IY21 1712 aaKnown RBP24.6■■□□□ 1.53
LST1-218ENST00000460834 CACNA1FO60840 1977 aa24.6■■□□□ 1.53
LST1-218ENST00000460834 TIAM2Q8IVF5 1701 aa24.59■■□□□ 1.53
LST1-218ENST00000460834 ALDH1B1P30837 517 aa24.59■■□□□ 1.53
LST1-218ENST00000460834 CCDC30Q5VVM6 783 aa24.59■■□□□ 1.53
LST1-218ENST00000460834 OLFM4Q6UX06 510 aa24.59■■□□□ 1.53
LST1-218ENST00000460834 FANCIQ9NVI1 1328 aa24.59■■□□□ 1.53
LST1-218ENST00000460834 TWISTNBQ3B726 338 aaPredicted RBP24.58■■□□□ 1.53
LST1-218ENST00000460834 RNF123Q5XPI4 1314 aa24.58■■□□□ 1.52
LST1-218ENST00000460834 TAF1P21675 1872 aa24.58■■□□□ 1.52
LST1-218ENST00000460834 ATP5J2-PTCD1G3V325 749 aa24.57■■□□□ 1.52
LST1-218ENST00000460834 ZNF428Q96B54 188 aa24.57■■□□□ 1.52
LST1-218ENST00000460834 LTBP3Q9NS15 1303 aa24.57■■□□□ 1.52
LST1-218ENST00000460834 TCERG1O14776 1098 aaKnown RBP24.56■■□□□ 1.52
LST1-218ENST00000460834 KIF3CO14782 793 aa24.56■■□□□ 1.52
LST1-218ENST00000460834 C1QTNF8P60827 252 aa24.56■■□□□ 1.52
LST1-218ENST00000460834 TRIM28Q13263 835 aaKnown RBP24.56■■□□□ 1.52
LST1-218ENST00000460834 TRMT112Q9UI30 125 aaKnown RBP24.56■■□□□ 1.52
LST1-218ENST00000460834 ZNF521Q96K83 1311 aa24.56■■□□□ 1.52
LST1-218ENST00000460834 SNED1Q8TER0 1413 aa24.55■■□□□ 1.52
LST1-218ENST00000460834 SOGA3Q5TF21 947 aa24.55■■□□□ 1.52
LST1-218ENST00000460834 NLRP3Q96P20 1036 aa24.55■■□□□ 1.52
LST1-218ENST00000460834 CRAMP1Q96RY5 1269 aa24.55■■□□□ 1.52
LST1-218ENST00000460834 CHMP4AQ9BY43 222 aa24.55■■□□□ 1.52
LST1-218ENST00000460834 VAMP4O75379 141 aa24.54■■□□□ 1.52
LST1-218ENST00000460834 HCLS1P14317 486 aaPredicted RBP24.54■■□□□ 1.52
LST1-218ENST00000460834 EXOSC9Q06265 439 aaKnown RBP24.54■■□□□ 1.52
LST1-218ENST00000460834 RIC3Q7Z5B4 369 aa24.54■■□□□ 1.52
LST1-218ENST00000460834 GOLGA2Q08379 1002 aa24.53■■□□□ 1.52
LST1-218ENST00000460834 CCDC93Q567U6 631 aa24.53■■□□□ 1.52
LST1-218ENST00000460834 G2E3Q7L622 706 aa24.53■■□□□ 1.52
LST1-218ENST00000460834 SLC51AQ86UW1 340 aa24.53■■□□□ 1.52
LST1-218ENST00000460834 RPGRQ92834 1020 aaKnown RBP24.53■■□□□ 1.52
LST1-218ENST00000460834 TAOK3Q9H2K8 898 aa24.53■■□□□ 1.52
LST1-218ENST00000460834 NMRK2Q9NPI5 230 aa24.53■■□□□ 1.52
LST1-218ENST00000460834 SH3TC1Q8TE82 1336 aa24.53■■□□□ 1.52
LST1-218ENST00000460834 RBM17Q96I25 401 aaKnown RBP24.52■■□□□ 1.52
LST1-218ENST00000460834 ZC3H4Q9UPT8 1303 aaKnown RBP24.52■■□□□ 1.52
LST1-218ENST00000460834 CCER2I3L3R5 266 aa24.51■■□□□ 1.51
LST1-218ENST00000460834 FAM89AQ96GI7 184 aa24.51■■□□□ 1.51
LST1-218ENST00000460834 MYD88Q99836 296 aa24.5■■□□□ 1.51
LST1-218ENST00000460834 METTL22Q9BUU2 404 aaPredicted RBP24.5■■□□□ 1.51
LST1-218ENST00000460834 SLC4A2P04920 1241 aa24.49■■□□□ 1.51
LST1-218ENST00000460834 FKBP4Q02790 459 aaKnown RBP eCLIP24.49■■□□□ 1.51
LST1-218ENST00000460834 KSR2Q6VAB6 950 aa24.49■■□□□ 1.51
LST1-218ENST00000460834 RTKN2Q8IZC4 609 aa24.49■■□□□ 1.51
LST1-218ENST00000460834 ABCC4O15439 1325 aa24.48■■□□□ 1.51
LST1-218ENST00000460834 STK31Q9BXU1 1019 aa24.48■■□□□ 1.51
LST1-218ENST00000460834 MAP3K2Q9Y2U5 619 aa24.48■■□□□ 1.51
LST1-218ENST00000460834 PI4KAP2A4QPH2 592 aa24.47■■□□□ 1.51
LST1-218ENST00000460834 GLTPD2A6NH11 291 aa24.47■■□□□ 1.51
LST1-218ENST00000460834 PI4KAP1Q8N8J0 262 aa24.47■■□□□ 1.51
LST1-218ENST00000460834 KDM2BQ8NHM5 1336 aa24.46■■□□□ 1.51
LST1-218ENST00000460834 DDX58O95786 925 aaKnown RBP24.46■■□□□ 1.51
LST1-218ENST00000460834 CC2D2BQ6DHV5 1058 aa24.46■■□□□ 1.51
LST1-218ENST00000460834 MYH16Q9H6N6 1097 aa24.46■■□□□ 1.51
LST1-218ENST00000460834 RRAGCQ9HB90 399 aa24.46■■□□□ 1.51
LST1-218ENST00000460834 ZNF277Q9NRM2 450 aaPredicted RBP24.46■■□□□ 1.51
LST1-218ENST00000460834 COL4A1P02462 1669 aa24.46■■□□□ 1.51
LST1-218ENST00000460834 PPEF1O14829 653 aaPredicted RBP24.45■■□□□ 1.5
LST1-218ENST00000460834 IGKV5-2P06315 115 aa24.45■■□□□ 1.5
LST1-218ENST00000460834 SF3B3Q15393 1217 aaKnown RBP24.45■■□□□ 1.5
LST1-218ENST00000460834 RTL5Q5HYW3 569 aaPredicted RBP24.45■■□□□ 1.5
LST1-218ENST00000460834 CCDC191Q8NCU4 936 aa24.45■■□□□ 1.5
LST1-218ENST00000460834 ZBTB38Q8NAP3 1195 aaPredicted RBP24.44■■□□□ 1.5
LST1-218ENST00000460834 PSMD1Q99460 953 aa24.44■■□□□ 1.5
LST1-218ENST00000460834 WDR90Q96KV7 1748 aa24.44■■□□□ 1.5
LST1-218ENST00000460834 IRS4O14654 1257 aaPredicted RBP24.43■■□□□ 1.5
LST1-218ENST00000460834 JARID2Q92833 1246 aaPredicted RBP24.43■■□□□ 1.5
LST1-218ENST00000460834 ATP6V0A2Q9Y487 856 aa24.43■■□□□ 1.5
LST1-218ENST00000460834 POTECB2RU33 542 aa24.42■■□□□ 1.5
LST1-218ENST00000460834 BBOX1O75936 387 aa24.42■■□□□ 1.5
LST1-218ENST00000460834 PCCAP05165 728 aaPredicted RBP24.42■■□□□ 1.5
LST1-218ENST00000460834 FLIIQ13045 1269 aa24.42■■□□□ 1.5
LST1-218ENST00000460834 CWC25Q9NXE8 425 aaPredicted RBP24.42■■□□□ 1.5
LST1-218ENST00000460834 COL4A5P29400 1685 aa24.42■■□□□ 1.5
LST1-218ENST00000460834 DDX46Q7L014 1031 aaKnown RBP24.41■■□□□ 1.5
LST1-218ENST00000460834 SP8Q8IXZ3 490 aa24.41■■□□□ 1.5
LST1-218ENST00000460834 LRRC37AA6NMS7 1700 aa24.41■■□□□ 1.5
LST1-218ENST00000460834 TOMM70O94826 608 aa24.4■■□□□ 1.5
LST1-218ENST00000460834 IARSP41252 1262 aaKnown RBP24.4■■□□□ 1.5
LST1-218ENST00000460834 GRAPQ13588 217 aa24.4■■□□□ 1.5
LST1-218ENST00000460834 GRIPAP1Q4V328 841 aa24.4■■□□□ 1.5
LST1-218ENST00000460834 GRAPLQ8TC17 118 aaPredicted RBP24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms