RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 DDX60Q8IY21 1712 aaKnown RBP17.85■□□□□ 0.45
HDLBP-229ENST00000460826 SYNE4Q8N205 404 aa17.85■□□□□ 0.45
HDLBP-229ENST00000460826 NPHP1O15259 732 aa17.84■□□□□ 0.45
HDLBP-229ENST00000460826 BRPF1P55201 1214 aaPredicted RBP17.84■□□□□ 0.45
HDLBP-229ENST00000460826 ST5P78524 1137 aa17.84■□□□□ 0.45
HDLBP-229ENST00000460826 CWF19L2Q2TBE0 894 aaKnown RBP17.84■□□□□ 0.45
HDLBP-229ENST00000460826 PPP1R42Q7Z4L9 355 aa17.84■□□□□ 0.45
HDLBP-229ENST00000460826 UTP14AQ9BVJ6 771 aaKnown RBP17.84■□□□□ 0.45
HDLBP-229ENST00000460826 NYXQ9GZU5 481 aa17.84■□□□□ 0.45
HDLBP-229ENST00000460826 NOB1Q9ULX3 412 aaKnown RBP17.84■□□□□ 0.45
HDLBP-229ENST00000460826 PTPRCP08575 1304 aa17.83■□□□□ 0.44
HDLBP-229ENST00000460826 A0A0G2JLW4 131 aa17.83■□□□□ 0.44
HDLBP-229ENST00000460826 DPEP1P16444 411 aa17.83■□□□□ 0.44
HDLBP-229ENST00000460826 CHRNA5P30532 468 aa17.83■□□□□ 0.44
HDLBP-229ENST00000460826 BRIP1Q9BX63 1249 aa17.83■□□□□ 0.44
HDLBP-229ENST00000460826 TRMT112Q9UI30 125 aaKnown RBP17.83■□□□□ 0.44
HDLBP-229ENST00000460826 CACNA1SQ13698 1873 aa17.83■□□□□ 0.44
HDLBP-229ENST00000460826 NEURL1BA8MQ27 555 aa17.82■□□□□ 0.44
HDLBP-229ENST00000460826 GTF2E1P29083 439 aaPredicted RBP17.82■□□□□ 0.44
HDLBP-229ENST00000460826 TGFB2P61812 414 aa17.82■□□□□ 0.44
HDLBP-229ENST00000460826 NEXNQ0ZGT2 675 aa17.82■□□□□ 0.44
HDLBP-229ENST00000460826 BEND3Q5T5X7 828 aa17.82■□□□□ 0.44
HDLBP-229ENST00000460826 CCDC191Q8NCU4 936 aa17.82■□□□□ 0.44
HDLBP-229ENST00000460826 WWC3Q9ULE0 1092 aa17.82■□□□□ 0.44
HDLBP-229ENST00000460826 KCNA3P22001 575 aa17.81■□□□□ 0.44
HDLBP-229ENST00000460826 RTL5Q5HYW3 569 aaPredicted RBP17.81■□□□□ 0.44
HDLBP-229ENST00000460826 C3orf67Q6ZVT6 689 aa17.81■□□□□ 0.44
HDLBP-229ENST00000460826 JARID2Q92833 1246 aaPredicted RBP17.81■□□□□ 0.44
HDLBP-229ENST00000460826 FAM89AQ96GI7 184 aa17.81■□□□□ 0.44
HDLBP-229ENST00000460826 CWC25Q9NXE8 425 aaPredicted RBP17.81■□□□□ 0.44
HDLBP-229ENST00000460826 RIC1Q4ADV7 1423 aa17.81■□□□□ 0.44
HDLBP-229ENST00000460826 SH3TC1Q8TE82 1336 aa17.8■□□□□ 0.44
HDLBP-229ENST00000460826 SLC4A10Q6U841 1118 aa17.8■□□□□ 0.44
HDLBP-229ENST00000460826 C2CD5Q86YS7 1000 aa17.8■□□□□ 0.44
HDLBP-229ENST00000460826 LINS1Q8NG48 757 aa17.8■□□□□ 0.44
HDLBP-229ENST00000460826 TNNQ9UQP3 1299 aa17.8■□□□□ 0.44
HDLBP-229ENST00000460826 RNF123Q5XPI4 1314 aa17.79■□□□□ 0.44
HDLBP-229ENST00000460826 KIF16BQ96L93 1317 aa17.79■□□□□ 0.44
HDLBP-229ENST00000460826 MYH3P11055 1940 aa17.79■□□□□ 0.44
HDLBP-229ENST00000460826 HCLS1P14317 486 aaPredicted RBP17.79■□□□□ 0.44
HDLBP-229ENST00000460826 PDE6BP35913 854 aa17.79■□□□□ 0.44
HDLBP-229ENST00000460826 SLC10A5Q5PT55 438 aa17.79■□□□□ 0.44
HDLBP-229ENST00000460826 GOLGB1Q14789 3259 aaKnown RBP17.78■□□□□ 0.44
HDLBP-229ENST00000460826 TAF1P21675 1872 aa17.78■□□□□ 0.44
HDLBP-229ENST00000460826 KLRG2A4D1S0 409 aaPredicted RBP17.78■□□□□ 0.44
HDLBP-229ENST00000460826 PCCAP05165 728 aaPredicted RBP17.78■□□□□ 0.44
HDLBP-229ENST00000460826 GCKRQ14397 625 aa17.78■□□□□ 0.44
HDLBP-229ENST00000460826 ZBTB38Q8NAP3 1195 aaPredicted RBP17.78■□□□□ 0.44
HDLBP-229ENST00000460826 FRAT1Q92837 279 aaPredicted RBP17.78■□□□□ 0.44
HDLBP-229ENST00000460826 H0YIN7 160 aa17.77■□□□□ 0.44
HDLBP-229ENST00000460826 API5Q9BZZ5 524 aaKnown RBP17.77■□□□□ 0.44
HDLBP-229ENST00000460826 SRCIN1Q9C0H9 1055 aa17.77■□□□□ 0.44
HDLBP-229ENST00000460826 SLX4Q8IY92 1834 aa17.77■□□□□ 0.43
HDLBP-229ENST00000460826 ARFGEF1Q9Y6D6 1849 aa17.77■□□□□ 0.43
HDLBP-229ENST00000460826 H7C1W4 665 aa17.76■□□□□ 0.43
HDLBP-229ENST00000460826 IRS4O14654 1257 aaPredicted RBP17.76■□□□□ 0.43
HDLBP-229ENST00000460826 SRGNP10124 158 aa17.76■□□□□ 0.43
HDLBP-229ENST00000460826 ARHGAP45Q92619 1136 aa17.76■□□□□ 0.43
HDLBP-229ENST00000460826 RCAN3Q9UKA8 241 aa17.76■□□□□ 0.43
HDLBP-229ENST00000460826 ALDH1L1O75891 902 aa17.75■□□□□ 0.43
HDLBP-229ENST00000460826 TRIM27P14373 513 aa17.75■□□□□ 0.43
HDLBP-229ENST00000460826 CASP7P55210 303 aa17.75■□□□□ 0.43
HDLBP-229ENST00000460826 CRY2Q49AN0 593 aa17.75■□□□□ 0.43
HDLBP-229ENST00000460826 UBE3BQ7Z3V4 1068 aa17.75■□□□□ 0.43
HDLBP-229ENST00000460826 ABCC4O15439 1325 aa17.74■□□□□ 0.43
HDLBP-229ENST00000460826 CDHR2Q9BYE9 1310 aa17.74■□□□□ 0.43
HDLBP-229ENST00000460826 YBX3P16989 372 aaKnown RBP eCLIP17.74■□□□□ 0.434e-8■□□□□ 8.4
HDLBP-229ENST00000460826 ZKSCAN2Q63HK3 967 aa17.74■□□□□ 0.43
HDLBP-229ENST00000460826 ATF7IPQ6VMQ6 1270 aa17.74■□□□□ 0.43
HDLBP-229ENST00000460826 PELP1Q8IZL8 1130 aaKnown RBP17.74■□□□□ 0.43
HDLBP-229ENST00000460826 ZNF622Q969S3 477 aaKnown RBP eCLIP17.74■□□□□ 0.43
HDLBP-229ENST00000460826 NLRP3Q96P20 1036 aa17.74■□□□□ 0.43
HDLBP-229ENST00000460826 PIM2Q9P1W9 311 aa17.74■□□□□ 0.43
HDLBP-229ENST00000460826 PDZRN3Q9UPQ7 1066 aa17.74■□□□□ 0.43
HDLBP-229ENST00000460826 IPO8O15397 1037 aaKnown RBP17.73■□□□□ 0.43
HDLBP-229ENST00000460826 CLUAP1Q96AJ1 413 aa17.73■□□□□ 0.43
HDLBP-229ENST00000460826 MASTLQ96GX5 879 aa17.73■□□□□ 0.43
HDLBP-229ENST00000460826 COL4A1P02462 1669 aa17.73■□□□□ 0.43
HDLBP-229ENST00000460826 NPR1P16066 1061 aa17.72■□□□□ 0.43
HDLBP-229ENST00000460826 STYK1Q6J9G0 422 aa17.72■□□□□ 0.43
HDLBP-229ENST00000460826 BCS1LQ9Y276 419 aa17.72■□□□□ 0.43
HDLBP-229ENST00000460826 GRM8O00222 908 aa17.71■□□□□ 0.43
HDLBP-229ENST00000460826 GPR162Q16538 588 aa17.71■□□□□ 0.43
HDLBP-229ENST00000460826 TTLL6Q8N841 843 aa17.71■□□□□ 0.43
HDLBP-229ENST00000460826 PDE8AO60658 829 aa17.7■□□□□ 0.42
HDLBP-229ENST00000460826 NBPF7P0C2Y1 421 aaPredicted RBP17.7■□□□□ 0.42
HDLBP-229ENST00000460826 HOXA10P31260 410 aaPredicted RBP17.7■□□□□ 0.42
HDLBP-229ENST00000460826 CCT4P50991 539 aaKnown RBP17.7■□□□□ 0.42
HDLBP-229ENST00000460826 SF3B3Q15393 1217 aaKnown RBP17.7■□□□□ 0.42
HDLBP-229ENST00000460826 DALRD3Q5D0E6 543 aaKnown RBP17.7■□□□□ 0.42
HDLBP-229ENST00000460826 RPGRQ92834 1020 aaKnown RBP17.7■□□□□ 0.42
HDLBP-229ENST00000460826 C9orf78Q9NZ63 289 aaPredicted RBP17.7■□□□□ 0.42
HDLBP-229ENST00000460826 UTRNP46939 3433 aa17.7■□□□□ 0.42
HDLBP-229ENST00000460826 PLIN1O60240 522 aa17.69■□□□□ 0.42
HDLBP-229ENST00000460826 RLBP1P12271 317 aa17.69■□□□□ 0.42
HDLBP-229ENST00000460826 INTS3Q68E01 1043 aaKnown RBP17.69■□□□□ 0.42
HDLBP-229ENST00000460826 SLC51AQ86UW1 340 aa17.69■□□□□ 0.42
HDLBP-229ENST00000460826 CNKSR1Q969H4 720 aa17.69■□□□□ 0.42
HDLBP-229ENST00000460826 CCDC85AQ96PX6 553 aaPredicted RBP17.69■□□□□ 0.42
HDLBP-229ENST00000460826 USP44Q9H0E7 712 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms