RNA–Protein interactions for RNA: ENST00000460686.1

FAM228B-201, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 5

Gene FAM228B, Length 357 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-201ENST00000460686 KLK14Q9P0G3 267 aa9.35□□□□□ -0.91
FAM228B-201ENST00000460686 TGFBR3LH3BV60 316 aa9.34□□□□□ -0.91
FAM228B-201ENST00000460686 HOXB4P17483 251 aaPredicted RBP9.34□□□□□ -0.91
FAM228B-201ENST00000460686 KCNQ4P56696 695 aa9.34□□□□□ -0.91
FAM228B-201ENST00000460686 BHMTQ93088 406 aa9.34□□□□□ -0.91
FAM228B-201ENST00000460686 ARID3CA6NKF2 412 aa9.33□□□□□ -0.92
FAM228B-201ENST00000460686 TBC1D8BQ0IIM8 1120 aa9.33□□□□□ -0.92
FAM228B-201ENST00000460686 DGKZQ13574 1117 aa9.33□□□□□ -0.92
FAM228B-201ENST00000460686 PRIMPOLQ96LW4 560 aa9.33□□□□□ -0.92
FAM228B-201ENST00000460686 SUV39H2Q9H5I1 410 aa9.33□□□□□ -0.92
FAM228B-201ENST00000460686 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.33□□□□□ -0.92
FAM228B-201ENST00000460686 ACIN1Q9UKV3 1341 aaKnown RBP9.32□□□□□ -0.92
FAM228B-201ENST00000460686 PRMT3O60678 531 aa9.32□□□□□ -0.92
FAM228B-201ENST00000460686 PLA2G4EQ3MJ16 856 aa9.32□□□□□ -0.92
FAM228B-201ENST00000460686 IER5Q5VY09 327 aa9.32□□□□□ -0.92
FAM228B-201ENST00000460686 STK32AQ8WU08 396 aa9.32□□□□□ -0.92
FAM228B-201ENST00000460686 QTRT2Q9H974 415 aaKnown RBP9.32□□□□□ -0.92
FAM228B-201ENST00000460686 SERPINA10Q9UK55 444 aa9.32□□□□□ -0.92
FAM228B-201ENST00000460686 ZMIZ1Q9ULJ6 1067 aa9.32□□□□□ -0.92
FAM228B-201ENST00000460686 BCS1LQ9Y276 419 aa9.32□□□□□ -0.92
FAM228B-201ENST00000460686 IGHA1P01876 353 aa9.31□□□□□ -0.92
FAM228B-201ENST00000460686 ELOAQ14241 798 aaKnown RBP9.31□□□□□ -0.92
FAM228B-201ENST00000460686 SWI5Q1ZZU3 235 aa9.31□□□□□ -0.92
FAM228B-201ENST00000460686 PNMA5Q96PV4 448 aa9.31□□□□□ -0.92
FAM228B-201ENST00000460686 IGFLR1Q9H665 355 aa9.31□□□□□ -0.92
FAM228B-201ENST00000460686 NOP53Q9NZM5 478 aaKnown RBP9.31□□□□□ -0.92
FAM228B-201ENST00000460686 ADARB2-AS1A8MUL3 147 aa9.3□□□□□ -0.92
FAM228B-201ENST00000460686 EPB42P16452 691 aa9.3□□□□□ -0.92
FAM228B-201ENST00000460686 COL8A1P27658 744 aa9.3□□□□□ -0.92
FAM228B-201ENST00000460686 ADH7P40394 386 aa9.3□□□□□ -0.92
FAM228B-201ENST00000460686 ALYREFQ86V81 257 aaKnown RBP9.3□□□□□ -0.92
FAM228B-201ENST00000460686 TNFRSF25Q93038 417 aa9.3□□□□□ -0.92
FAM228B-201ENST00000460686 IDH3AP50213 366 aa9.29□□□□□ -0.92
FAM228B-201ENST00000460686 FKBP5Q13451 457 aaPredicted RBP9.29□□□□□ -0.92
FAM228B-201ENST00000460686 C11orf91Q3C1V1 193 aa9.29□□□□□ -0.92
FAM228B-201ENST00000460686 PBXIP1Q96AQ6 731 aa9.29□□□□□ -0.92
FAM228B-201ENST00000460686 UBE2OQ9C0C9 1292 aaKnown RBP9.29□□□□□ -0.92
FAM228B-201ENST00000460686 KRBA1A5PL33 1030 aa9.28□□□□□ -0.92
FAM228B-201ENST00000460686 MSTNO14793 375 aa9.28□□□□□ -0.92
FAM228B-201ENST00000460686 ATG7O95352 703 aa9.28□□□□□ -0.92
FAM228B-201ENST00000460686 DMGDHQ9UI17 866 aaKnown RBP9.28□□□□□ -0.92
FAM228B-201ENST00000460686 M0R082 166 aa9.27□□□□□ -0.93
FAM228B-201ENST00000460686 ARSDP51689 593 aa9.27□□□□□ -0.93
FAM228B-201ENST00000460686 SRPK2P78362 688 aaKnown RBP9.27□□□□□ -0.93
FAM228B-201ENST00000460686 CCINQ13939 588 aa9.27□□□□□ -0.93
FAM228B-201ENST00000460686 ZNF417Q8TAU3 575 aa9.27□□□□□ -0.93
FAM228B-201ENST00000460686 MYO19Q96H55 970 aa9.27□□□□□ -0.93
FAM228B-201ENST00000460686 ZNF587Q96SQ5 575 aaPredicted RBP9.27□□□□□ -0.93
FAM228B-201ENST00000460686 MDFIQ99750 246 aa9.27□□□□□ -0.93
FAM228B-201ENST00000460686 PLVAPQ9BX97 442 aa9.27□□□□□ -0.93
FAM228B-201ENST00000460686 MICAL2O94851 1124 aa9.26□□□□□ -0.93
FAM228B-201ENST00000460686 NFKB1P19838 968 aa9.26□□□□□ -0.93
FAM228B-201ENST00000460686 INPP5BP32019 993 aa9.26□□□□□ -0.93
FAM228B-201ENST00000460686 TMEM164Q5U3C3 297 aa9.26□□□□□ -0.93
FAM228B-201ENST00000460686 IFT43Q96FT9 208 aa9.26□□□□□ -0.93
FAM228B-201ENST00000460686 MKNK1Q9BUB5 465 aa9.26□□□□□ -0.93
FAM228B-201ENST00000460686 GSX2Q9BZM3 304 aa9.26□□□□□ -0.93
FAM228B-201ENST00000460686 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.26□□□□□ -0.93
FAM228B-201ENST00000460686 FAM69CQ0P6D2 419 aa9.25□□□□□ -0.93
FAM228B-201ENST00000460686 OCLNQ16625 522 aa9.25□□□□□ -0.93
FAM228B-201ENST00000460686 KRT25Q7Z3Z0 450 aa9.25□□□□□ -0.93
FAM228B-201ENST00000460686 TRIM11Q96F44 468 aa9.25□□□□□ -0.93
FAM228B-201ENST00000460686 SPOCK3Q9BQ16 436 aa9.25□□□□□ -0.93
FAM228B-201ENST00000460686 EFCC1Q9HA90 598 aa9.25□□□□□ -0.93
FAM228B-201ENST00000460686 LRFN2Q9ULH4 789 aa9.25□□□□□ -0.93
FAM228B-201ENST00000460686 ALBP02768 609 aa9.24□□□□□ -0.93
FAM228B-201ENST00000460686 ITGB2P05107 769 aa9.24□□□□□ -0.93
FAM228B-201ENST00000460686 C14orf37Q86TY3 774 aa9.24□□□□□ -0.93
FAM228B-201ENST00000460686 STARD13Q9Y3M8 1113 aa9.24□□□□□ -0.93
FAM228B-201ENST00000460686 SPDYE3A6NKU9 549 aa9.23□□□□□ -0.93
FAM228B-201ENST00000460686 COX20Q5RI15 118 aa9.23□□□□□ -0.93
FAM228B-201ENST00000460686 C8orf86Q6ZUL3 223 aa9.23□□□□□ -0.93
FAM228B-201ENST00000460686 TREML1Q86YW5 311 aa9.23□□□□□ -0.93
FAM228B-201ENST00000460686 MICALL1Q8N3F8 863 aa9.23□□□□□ -0.93
FAM228B-201ENST00000460686 DNAJB12Q9NXW2 375 aaKnown RBP9.23□□□□□ -0.93
FAM228B-201ENST00000460686 CXXC1Q9P0U4 656 aaPredicted RBP9.23□□□□□ -0.93
FAM228B-201ENST00000460686 SLC6A14Q9UN76 642 aa9.23□□□□□ -0.93
FAM228B-201ENST00000460686 RB1CC1Q8TDY2 1594 aa9.23□□□□□ -0.93
FAM228B-201ENST00000460686 GRNP28799 593 aaKnown RBP9.22□□□□□ -0.93
FAM228B-201ENST00000460686 USP20Q9Y2K6 914 aa9.22□□□□□ -0.93
FAM228B-201ENST00000460686 C16orf46Q6P387 395 aa9.21□□□□□ -0.94
FAM228B-201ENST00000460686 RGL4Q8IZJ4 473 aa9.21□□□□□ -0.94
FAM228B-201ENST00000460686 CCDC82Q8N4S0 544 aa9.21□□□□□ -0.94
FAM228B-201ENST00000460686 SAP130Q9H0E3 1048 aa9.21□□□□□ -0.94
FAM228B-201ENST00000460686 NAA30Q147X3 362 aaPredicted RBP9.2□□□□□ -0.94
FAM228B-201ENST00000460686 PRRT3Q5FWE3 981 aa9.2□□□□□ -0.94
FAM228B-201ENST00000460686 CMTR1Q8N1G2 835 aaKnown RBP9.2□□□□□ -0.94
FAM228B-201ENST00000460686 CLP1Q92989 425 aaKnown RBP9.2□□□□□ -0.94
FAM228B-201ENST00000460686 RTCBQ9Y3I0 505 aaKnown RBP9.2□□□□□ -0.94
FAM228B-201ENST00000460686 C1QTNF9BB2RNN3 333 aa9.19□□□□□ -0.94
FAM228B-201ENST00000460686 OPLAHO14841 1288 aa9.19□□□□□ -0.94
FAM228B-201ENST00000460686 LILRB5O75023 590 aa9.19□□□□□ -0.94
FAM228B-201ENST00000460686 PTCD1O75127 700 aaKnown RBP9.19□□□□□ -0.94
FAM228B-201ENST00000460686 SASH3O75995 380 aa9.19□□□□□ -0.94
FAM228B-201ENST00000460686 PROCP04070 461 aa9.19□□□□□ -0.94
FAM228B-201ENST00000460686 SPATA31C1P0DKV0 1188 aa9.19□□□□□ -0.94
FAM228B-201ENST00000460686 RARAP10276 462 aa9.19□□□□□ -0.94
FAM228B-201ENST00000460686 TARSP26639 723 aaKnown RBP9.19□□□□□ -0.94
FAM228B-201ENST00000460686 NUDT8Q8WV74 236 aa9.19□□□□□ -0.94
FAM228B-201ENST00000460686 COL26A1Q96A83 441 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms