RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 SIL1Q9H173 461 aa12.09□□□□□ -0.47
EPB41-208ENST00000460378 ZNF287Q9HBT7 754 aa12.09□□□□□ -0.47
EPB41-208ENST00000460378 MPHOSPH10O00566 681 aaKnown RBP12.09□□□□□ -0.47
EPB41-208ENST00000460378 EXOSC9Q06265 439 aaKnown RBP12.09□□□□□ -0.47
EPB41-208ENST00000460378 MIER1Q8N108 512 aa12.09□□□□□ -0.47
EPB41-208ENST00000460378 CHPF2Q9P2E5 772 aa12.09□□□□□ -0.47
EPB41-208ENST00000460378 APLP1P51693 650 aa12.08□□□□□ -0.48
EPB41-208ENST00000460378 ZSCAN25Q6NSZ9 544 aa12.08□□□□□ -0.48
EPB41-208ENST00000460378 POLR3DP05423 398 aaPredicted RBP12.08□□□□□ -0.48
EPB41-208ENST00000460378 HSP90AA1P07900 732 aaKnown RBP12.08□□□□□ -0.48
EPB41-208ENST00000460378 DCAF15Q66K64 600 aa12.08□□□□□ -0.48
EPB41-208ENST00000460378 CLASRPQ8N2M8 674 aaKnown RBP12.08□□□□□ -0.48
EPB41-208ENST00000460378 CARD14Q9BXL6 1004 aa12.08□□□□□ -0.48
EPB41-208ENST00000460378 CDK12Q9NYV4 1490 aaPredicted RBP12.08□□□□□ -0.48
EPB41-208ENST00000460378 VTI1AQ96AJ9 217 aa12.07□□□□□ -0.48
EPB41-208ENST00000460378 COL15A1P39059 1388 aa12.07□□□□□ -0.48
EPB41-208ENST00000460378 KDM5AP29375 1690 aaKnown RBP12.07□□□□□ -0.48
EPB41-208ENST00000460378 MARCH6O60337 910 aa12.07□□□□□ -0.48
EPB41-208ENST00000460378 WDR63Q8IWG1 891 aa12.07□□□□□ -0.48
EPB41-208ENST00000460378 SLC10A4Q96EP9 437 aa12.07□□□□□ -0.48
EPB41-208ENST00000460378 SURF6O75683 361 aaKnown RBP12.06□□□□□ -0.48
EPB41-208ENST00000460378 IL27Q8NEV9 243 aa12.06□□□□□ -0.48
EPB41-208ENST00000460378 NACAP1Q9BZK3 213 aa12.06□□□□□ -0.48
EPB41-208ENST00000460378 MAP3K15Q6ZN16 1313 aa12.06□□□□□ -0.48
EPB41-208ENST00000460378 NFIXQ14938 502 aa12.06□□□□□ -0.48
EPB41-208ENST00000460378 USP48Q86UV5 1035 aa12.06□□□□□ -0.48
EPB41-208ENST00000460378 SPINK5Q9NQ38 1064 aaPredicted RBP12.06□□□□□ -0.48
EPB41-208ENST00000460378 RAD17O75943 681 aa12.06□□□□□ -0.48
EPB41-208ENST00000460378 ECM2O94769 699 aaPredicted RBP12.06□□□□□ -0.48
EPB41-208ENST00000460378 GNAI2P04899 355 aa12.06□□□□□ -0.48
EPB41-208ENST00000460378 NBR1Q14596 966 aa12.06□□□□□ -0.48
EPB41-208ENST00000460378 SYNE3Q6ZMZ3 975 aa12.06□□□□□ -0.48
EPB41-208ENST00000460378 CNTNAP4Q9C0A0 1308 aa12.06□□□□□ -0.48
EPB41-208ENST00000460378 CCER2I3L3R5 266 aa12.05□□□□□ -0.48
EPB41-208ENST00000460378 NOL8Q76FK4 1167 aaKnown RBP12.05□□□□□ -0.48
EPB41-208ENST00000460378 MPHOSPH6Q99547 160 aaKnown RBP12.05□□□□□ -0.48
EPB41-208ENST00000460378 ZNF277Q9NRM2 450 aaPredicted RBP12.05□□□□□ -0.48
EPB41-208ENST00000460378 ERC2O15083 957 aa12.05□□□□□ -0.48
EPB41-208ENST00000460378 KSR2Q6VAB6 950 aa12.05□□□□□ -0.48
EPB41-208ENST00000460378 CCDC191Q8NCU4 936 aa12.05□□□□□ -0.48
EPB41-208ENST00000460378 TSR2Q969E8 191 aaKnown RBP12.05□□□□□ -0.48
EPB41-208ENST00000460378 PI4KAP2A4QPH2 592 aa12.05□□□□□ -0.48
EPB41-208ENST00000460378 IARSP41252 1262 aaKnown RBP12.05□□□□□ -0.48
EPB41-208ENST00000460378 IREB2P48200 963 aaKnown RBP12.05□□□□□ -0.48
EPB41-208ENST00000460378 PABPC4Q13310 644 aaKnown RBP eCLIP12.05□□□□□ -0.489e-11■■□□□ 14.1
EPB41-208ENST00000460378 PI4KAP1Q8N8J0 262 aa12.05□□□□□ -0.48
EPB41-208ENST00000460378 FAM89AQ96GI7 184 aa12.05□□□□□ -0.48
EPB41-208ENST00000460378 TMOD4Q9NZQ9 345 aa12.05□□□□□ -0.48
EPB41-208ENST00000460378 ERICH2A1L162 156 aa12.04□□□□□ -0.48
EPB41-208ENST00000460378 ERVV-1B6SEH8 477 aa12.04□□□□□ -0.48
EPB41-208ENST00000460378 TRDNQ13061 729 aa12.04□□□□□ -0.48
EPB41-208ENST00000460378 STYK1Q6J9G0 422 aa12.04□□□□□ -0.48
EPB41-208ENST00000460378 PRPF40BQ6NWY9 871 aaKnown RBP12.04□□□□□ -0.48
EPB41-208ENST00000460378 SMCR8Q8TEV9 937 aaPredicted RBP12.04□□□□□ -0.48
EPB41-208ENST00000460378 SLC4A8Q2Y0W8 1093 aa12.04□□□□□ -0.48
EPB41-208ENST00000460378 TNS2Q63HR2 1409 aa12.04□□□□□ -0.48
EPB41-208ENST00000460378 KRT26Q7Z3Y9 468 aa12.04□□□□□ -0.48
EPB41-208ENST00000460378 LINC00116Q8NCU8 138 aa12.04□□□□□ -0.48
EPB41-208ENST00000460378 HOXD10P28358 340 aa12.04□□□□□ -0.48
EPB41-208ENST00000460378 MVPQ14764 893 aaKnown RBP12.04□□□□□ -0.48
EPB41-208ENST00000460378 IVNS1ABPQ9Y6Y0 642 aa12.04□□□□□ -0.48
EPB41-208ENST00000460378 DOK7Q18PE1 504 aa12.04□□□□□ -0.48
EPB41-208ENST00000460378 TNS4Q8IZW8 715 aa12.04□□□□□ -0.48
EPB41-208ENST00000460378 PRKAG2Q9UGJ0 569 aa12.04□□□□□ -0.48
EPB41-208ENST00000460378 CD163L1Q9NR16 1453 aa12.03□□□□□ -0.48
EPB41-208ENST00000460378 HOXB7P09629 217 aa12.03□□□□□ -0.48
EPB41-208ENST00000460378 MCCP23508 829 aa12.03□□□□□ -0.48
EPB41-208ENST00000460378 RWDD1Q9H446 243 aaPredicted RBP12.03□□□□□ -0.48
EPB41-208ENST00000460378 TBC1D22AQ8WUA7 517 aa12.03□□□□□ -0.48
EPB41-208ENST00000460378 FLIIQ13045 1269 aa12.03□□□□□ -0.48
EPB41-208ENST00000460378 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.03□□□□□ -0.48
EPB41-208ENST00000460378 ONECUT3O60422 494 aaPredicted RBP12.03□□□□□ -0.48
EPB41-208ENST00000460378 GLRX3O76003 335 aaKnown RBP12.03□□□□□ -0.48
EPB41-208ENST00000460378 PLCG2P16885 1265 aa12.03□□□□□ -0.48
EPB41-208ENST00000460378 MKRN1Q9UHC7 482 aaKnown RBP12.03□□□□□ -0.48
EPB41-208ENST00000460378 SOS1Q07889 1333 aaPredicted RBP12.02□□□□□ -0.48
EPB41-208ENST00000460378 MFAP1P55081 439 aaKnown RBP12.02□□□□□ -0.48
EPB41-208ENST00000460378 FKBP4Q02790 459 aaKnown RBP eCLIP12.02□□□□□ -0.48
EPB41-208ENST00000460378 CLSTN1O94985 981 aa12.02□□□□□ -0.49
EPB41-208ENST00000460378 ZNF157P51786 506 aaPredicted RBP12.02□□□□□ -0.49
EPB41-208ENST00000460378 DNAJC2Q99543 621 aaKnown RBP12.02□□□□□ -0.49
EPB41-208ENST00000460378 HEG1Q9ULI3 1381 aa12.02□□□□□ -0.49
EPB41-208ENST00000460378 AKAP17AQ02040 695 aaKnown RBP12.02□□□□□ -0.49
EPB41-208ENST00000460378 MAP3K12Q12852 859 aa12.02□□□□□ -0.49
EPB41-208ENST00000460378 CCDC85CA6NKD9 419 aa12.01□□□□□ -0.49
EPB41-208ENST00000460378 IDH1O75874 414 aaKnown RBP12.01□□□□□ -0.49
EPB41-208ENST00000460378 USP16Q9Y5T5 823 aa12.01□□□□□ -0.49
EPB41-208ENST00000460378 COL5A2P05997 1499 aaPredicted RBP12.01□□□□□ -0.49
EPB41-208ENST00000460378 TOMM70O94826 608 aa12.01□□□□□ -0.49
EPB41-208ENST00000460378 HIBADHP31937 336 aaKnown RBP12.01□□□□□ -0.49
EPB41-208ENST00000460378 HUNKP57058 714 aa12.01□□□□□ -0.49
EPB41-208ENST00000460378 CCDC136Q96JN2 1154 aa12.01□□□□□ -0.49
EPB41-208ENST00000460378 CELF2O95319 508 aaKnown RBP12.01□□□□□ -0.49
EPB41-208ENST00000460378 DZIP1LQ8IYY4 767 aaKnown RBP12.01□□□□□ -0.49
EPB41-208ENST00000460378 JARID2Q92833 1246 aaPredicted RBP12.01□□□□□ -0.49
EPB41-208ENST00000460378 CRBNQ96SW2 442 aa12.01□□□□□ -0.49
EPB41-208ENST00000460378 DDX19BQ9UMR2 479 aa12.01□□□□□ -0.49
EPB41-208ENST00000460378 MTMR7Q9Y216 660 aa12.01□□□□□ -0.49
EPB41-208ENST00000460378 PLEKHG2Q9H7P9 1386 aa12□□□□□ -0.49
EPB41-208ENST00000460378 EPHX2P34913 555 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms