RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 SAP130Q9H0E3 1048 aa6.08□□□□□ -1.44
VPS8-215ENST00000460158 QTRT2Q9H974 415 aaKnown RBP6.08□□□□□ -1.44
VPS8-215ENST00000460158 PCDHGC4Q9Y5F7 938 aa6.08□□□□□ -1.44
VPS8-215ENST00000460158 IVNS1ABPQ9Y6Y0 642 aa6.08□□□□□ -1.44
VPS8-215ENST00000460158 EPXP11678 715 aa6.07□□□□□ -1.44
VPS8-215ENST00000460158 COX20Q5RI15 118 aa6.07□□□□□ -1.44
VPS8-215ENST00000460158 CCER1Q8TC90 406 aaPredicted RBP6.07□□□□□ -1.44
VPS8-215ENST00000460158 GTF3C2Q8WUA4 911 aaPredicted RBP6.07□□□□□ -1.44
VPS8-215ENST00000460158 BTBD6Q96KE9 485 aa6.07□□□□□ -1.44
VPS8-215ENST00000460158 NOP53Q9NZM5 478 aaKnown RBP6.07□□□□□ -1.44
VPS8-215ENST00000460158 LRFN2Q9ULH4 789 aa6.07□□□□□ -1.44
VPS8-215ENST00000460158 GNEQ9Y223 722 aaKnown RBP6.07□□□□□ -1.44
VPS8-215ENST00000460158 ABL1P00519 1130 aa6.06□□□□□ -1.44
VPS8-215ENST00000460158 ATP4AP20648 1035 aa6.06□□□□□ -1.44
VPS8-215ENST00000460158 GRIN2CQ14957 1233 aa6.06□□□□□ -1.44
VPS8-215ENST00000460158 NBPF1Q3BBV0 1214 aa6.06□□□□□ -1.44
VPS8-215ENST00000460158 FAM182BQ5T319 152 aa6.06□□□□□ -1.44
VPS8-215ENST00000460158 C1orf53Q5VUE5 145 aa6.06□□□□□ -1.44
VPS8-215ENST00000460158 C16orf46Q6P387 395 aa6.06□□□□□ -1.44
VPS8-215ENST00000460158 C7orf43Q8WVR3 580 aa6.06□□□□□ -1.44
VPS8-215ENST00000460158 ZCCHC2Q9C0B9 1178 aaKnown RBP6.06□□□□□ -1.44
VPS8-215ENST00000460158 ANO2Q9NQ90 1003 aa6.06□□□□□ -1.44
VPS8-215ENST00000460158 AVENQ9NQS1 362 aaPredicted RBP6.06□□□□□ -1.44
VPS8-215ENST00000460158 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.06□□□□□ -1.44
VPS8-215ENST00000460158 ZDHHC3Q9NYG2 299 aa6.06□□□□□ -1.44
VPS8-215ENST00000460158 MTMR7Q9Y216 660 aa6.06□□□□□ -1.44
VPS8-215ENST00000460158 ZBTB7CA1YPR0 619 aa6.05□□□□□ -1.44
VPS8-215ENST00000460158 PATL2C9JE40 543 aaKnown RBP6.05□□□□□ -1.44
VPS8-215ENST00000460158 DGKGP49619 791 aa6.05□□□□□ -1.44
VPS8-215ENST00000460158 ZNF211Q13398 564 aaPredicted RBP6.05□□□□□ -1.44
VPS8-215ENST00000460158 MTMR3Q13615 1198 aa6.05□□□□□ -1.44
VPS8-215ENST00000460158 RTN1Q16799 776 aa6.05□□□□□ -1.44
VPS8-215ENST00000460158 MYO19Q96H55 970 aa6.05□□□□□ -1.44
VPS8-215ENST00000460158 SUV39H2Q9H5I1 410 aa6.05□□□□□ -1.44
VPS8-215ENST00000460158 ATXN7O15265 892 aaPredicted RBP6.04□□□□□ -1.44
VPS8-215ENST00000460158 FURINP09958 794 aa6.04□□□□□ -1.44
VPS8-215ENST00000460158 TATP17735 454 aaPredicted RBP6.04□□□□□ -1.44
VPS8-215ENST00000460158 ADH6P28332 368 aa6.04□□□□□ -1.44
VPS8-215ENST00000460158 RHPN1Q8TCX5 695 aa6.04□□□□□ -1.44
VPS8-215ENST00000460158 KLK14Q9P0G3 267 aa6.04□□□□□ -1.44
VPS8-215ENST00000460158 NEURL1BA8MQ27 555 aa6.03□□□□□ -1.44
VPS8-215ENST00000460158 C1QTNF9BB2RNN3 333 aa6.03□□□□□ -1.44
VPS8-215ENST00000460158 TNFRSF10BO14763 440 aa6.03□□□□□ -1.44
VPS8-215ENST00000460158 DGKZQ13574 1117 aa6.03□□□□□ -1.44
VPS8-215ENST00000460158 ARSJQ5FYB0 599 aaPredicted RBP6.03□□□□□ -1.44
VPS8-215ENST00000460158 BICDL1Q6ZP65 573 aa6.03□□□□□ -1.44
VPS8-215ENST00000460158 HELQQ8TDG4 1101 aa6.03□□□□□ -1.44
VPS8-215ENST00000460158 ZIC5Q96T25 663 aa6.03□□□□□ -1.44
VPS8-215ENST00000460158 GZF1Q9H116 711 aaPredicted RBP6.03□□□□□ -1.44
VPS8-215ENST00000460158 A0A1W2PNR3 127 aa6.02□□□□□ -1.45
VPS8-215ENST00000460158 SOWAHDA6NJG2 315 aa6.02□□□□□ -1.45
VPS8-215ENST00000460158 H3BRB1 525 aa6.02□□□□□ -1.45
VPS8-215ENST00000460158 ICMTO60725 284 aa6.02□□□□□ -1.45
VPS8-215ENST00000460158 MAPTP10636 758 aaKnown RBP6.02□□□□□ -1.45
VPS8-215ENST00000460158 FKBP4Q02790 459 aaKnown RBP eCLIP6.02□□□□□ -1.45
VPS8-215ENST00000460158 TNP2Q05952 138 aa6.02□□□□□ -1.45
VPS8-215ENST00000460158 C11orf91Q3C1V1 193 aa6.02□□□□□ -1.45
VPS8-215ENST00000460158 FAM26DQ5JW98 314 aa6.02□□□□□ -1.45
VPS8-215ENST00000460158 CHSY3Q70JA7 882 aa6.02□□□□□ -1.45
VPS8-215ENST00000460158 CD163Q86VB7 1156 aa6.02□□□□□ -1.45
VPS8-215ENST00000460158 ZNF280CQ8ND82 737 aa6.02□□□□□ -1.45
VPS8-215ENST00000460158 HSH2DQ96JZ2 352 aa6.02□□□□□ -1.45
VPS8-215ENST00000460158 TUT1Q9H6E5 874 aaKnown RBP6.02□□□□□ -1.45
VPS8-215ENST00000460158 EGFL7Q9UHF1 273 aa6.02□□□□□ -1.45
VPS8-215ENST00000460158 BCS1LQ9Y276 419 aa6.02□□□□□ -1.45
VPS8-215ENST00000460158 FAM157BP0CG42 384 aa6.01□□□□□ -1.45
VPS8-215ENST00000460158 LRRC69Q6ZNQ3 347 aa6.01□□□□□ -1.45
VPS8-215ENST00000460158 SUSD3Q96L08 255 aa6.01□□□□□ -1.45
VPS8-215ENST00000460158 STIM2Q9P246 746 aa6.01□□□□□ -1.45
VPS8-215ENST00000460158 DCDC2BA2VCK2 349 aa6□□□□□ -1.45
VPS8-215ENST00000460158 ZBTB39O15060 712 aa6□□□□□ -1.45
VPS8-215ENST00000460158 MPSTP25325 297 aa6□□□□□ -1.45
VPS8-215ENST00000460158 BRD2P25440 801 aaKnown RBP6□□□□□ -1.45
VPS8-215ENST00000460158 SF3B2Q13435 895 aaKnown RBP6□□□□□ -1.45
VPS8-215ENST00000460158 ECM1Q16610 540 aa6□□□□□ -1.45
VPS8-215ENST00000460158 SAMD5Q5TGI4 173 aa6□□□□□ -1.45
VPS8-215ENST00000460158 ZNF468Q5VIY5 522 aaPredicted RBP6□□□□□ -1.45
VPS8-215ENST00000460158 FCHSD1Q86WN1 690 aa6□□□□□ -1.45
VPS8-215ENST00000460158 GLYCTKQ8IVS8 523 aa6□□□□□ -1.45
VPS8-215ENST00000460158 ETFBKMTQ8IXQ9 262 aa6□□□□□ -1.45
VPS8-215ENST00000460158 Q8N3U1 123 aa6□□□□□ -1.45
VPS8-215ENST00000460158 IFT43Q96FT9 208 aa6□□□□□ -1.45
VPS8-215ENST00000460158 NEUROD4Q9HD90 331 aa6□□□□□ -1.45
VPS8-215ENST00000460158 KLF15Q9UIH9 416 aa6□□□□□ -1.45
VPS8-215ENST00000460158 HCN2Q9UL51 889 aa6□□□□□ -1.45
VPS8-215ENST00000460158 GPC6Q9Y625 555 aaPredicted RBP6□□□□□ -1.45
VPS8-215ENST00000460158 TGFBR3LH3BV60 316 aa5.99□□□□□ -1.45
VPS8-215ENST00000460158 KHNYNO15037 678 aaKnown RBP5.99□□□□□ -1.45
VPS8-215ENST00000460158 NPR3P17342 541 aa5.99□□□□□ -1.45
VPS8-215ENST00000460158 CD33P20138 364 aa5.99□□□□□ -1.45
VPS8-215ENST00000460158 CHRNA4P43681 627 aa5.99□□□□□ -1.45
VPS8-215ENST00000460158 LAMC2Q13753 1193 aa5.99□□□□□ -1.45
VPS8-215ENST00000460158 DMGDHQ9UI17 866 aaKnown RBP5.99□□□□□ -1.45
VPS8-215ENST00000460158 GJA3Q9Y6H8 435 aa5.99□□□□□ -1.45
VPS8-215ENST00000460158 FAM13AO94988 1023 aa5.98□□□□□ -1.45
VPS8-215ENST00000460158 HIF1AQ16665 826 aa5.98□□□□□ -1.45
VPS8-215ENST00000460158 SND1Q7KZF4 910 aaKnown RBP eCLIP5.98□□□□□ -1.45
VPS8-215ENST00000460158 TREML1Q86YW5 311 aa5.98□□□□□ -1.45
VPS8-215ENST00000460158 ANKIB1Q9P2G1 1089 aa5.98□□□□□ -1.45
VPS8-215ENST00000460158 BIN2Q9UBW5 565 aaPredicted RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms