RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 TOMM70O94826 608 aa20.18■□□□□ 0.82
SDF4-204ENST00000459994 CALD1Q05682 793 aaKnown RBP20.18■□□□□ 0.82
SDF4-204ENST00000459994 CHPF2Q9P2E5 772 aa20.18■□□□□ 0.82
SDF4-204ENST00000459994 IBTKQ9P2D0 1353 aaPredicted RBP20.18■□□□□ 0.82
SDF4-204ENST00000459994 SNED1Q8TER0 1413 aa20.18■□□□□ 0.82
SDF4-204ENST00000459994 ZNF853P0CG23 659 aa20.17■□□□□ 0.82
SDF4-204ENST00000459994 GTF2E1P29083 439 aaPredicted RBP20.17■□□□□ 0.82
SDF4-204ENST00000459994 CFAP44Q96MT7 982 aa20.17■□□□□ 0.82
SDF4-204ENST00000459994 TAOK3Q9H2K8 898 aa20.17■□□□□ 0.82
SDF4-204ENST00000459994 IL16Q14005 1332 aa20.17■□□□□ 0.82
SDF4-204ENST00000459994 KDM2BQ8NHM5 1336 aa20.17■□□□□ 0.82
SDF4-204ENST00000459994 LTBP3Q9NS15 1303 aa20.17■□□□□ 0.82
SDF4-204ENST00000459994 RIC1Q4ADV7 1423 aa20.17■□□□□ 0.82
SDF4-204ENST00000459994 GLTPD2A6NH11 291 aa20.16■□□□□ 0.82
SDF4-204ENST00000459994 POTECB2RU33 542 aa20.16■□□□□ 0.82
SDF4-204ENST00000459994 CRY2Q49AN0 593 aa20.16■□□□□ 0.82
SDF4-204ENST00000459994 SYNE4Q8N205 404 aa20.16■□□□□ 0.82
SDF4-204ENST00000459994 NYXQ9GZU5 481 aa20.16■□□□□ 0.82
SDF4-204ENST00000459994 DDX21Q9NR30 783 aaKnown RBP eCLIP20.16■□□□□ 0.82
SDF4-204ENST00000459994 ZC3H4Q9UPT8 1303 aaKnown RBP20.16■□□□□ 0.82
SDF4-204ENST00000459994 COL4A5P29400 1685 aa20.15■□□□□ 0.82
SDF4-204ENST00000459994 COL4A1P02462 1669 aa20.14■□□□□ 0.81
SDF4-204ENST00000459994 GOLGA2Q08379 1002 aa20.14■□□□□ 0.81
SDF4-204ENST00000459994 HDGFL1Q5TGJ6 251 aa20.14■□□□□ 0.81
SDF4-204ENST00000459994 DUSP27Q5VZP5 1158 aa20.14■□□□□ 0.81
SDF4-204ENST00000459994 CCDC93Q567U6 631 aa20.13■□□□□ 0.81
SDF4-204ENST00000459994 RBM46Q8TBY0 533 aaKnown RBP20.12■□□□□ 0.81
SDF4-204ENST00000459994 ZNF277Q9NRM2 450 aaPredicted RBP20.12■□□□□ 0.81
SDF4-204ENST00000459994 IFT57Q9NWB7 429 aa20.12■□□□□ 0.81
SDF4-204ENST00000459994 ELL2O00472 640 aaPredicted RBP20.11■□□□□ 0.81
SDF4-204ENST00000459994 GNAI1P63096 354 aa20.11■□□□□ 0.81
SDF4-204ENST00000459994 PPP1R42Q7Z4L9 355 aa20.11■□□□□ 0.81
SDF4-204ENST00000459994 NLRP10Q86W26 655 aa20.11■□□□□ 0.81
SDF4-204ENST00000459994 E9PSI1 815 aa20.1■□□□□ 0.81
SDF4-204ENST00000459994 DDNO94850 711 aaPredicted RBP20.1■□□□□ 0.81
SDF4-204ENST00000459994 HOXB7P09629 217 aa20.1■□□□□ 0.81
SDF4-204ENST00000459994 ALDH1B1P30837 517 aa20.1■□□□□ 0.81
SDF4-204ENST00000459994 HTRA3P83110 453 aa20.1■□□□□ 0.81
SDF4-204ENST00000459994 FKBP4Q02790 459 aaKnown RBP eCLIP20.1■□□□□ 0.81
SDF4-204ENST00000459994 SLFN5Q08AF3 891 aa20.1■□□□□ 0.81
SDF4-204ENST00000459994 TCIRG1Q13488 830 aa20.1■□□□□ 0.81
SDF4-204ENST00000459994 PARP10Q53GL7 1025 aa20.1■□□□□ 0.81
SDF4-204ENST00000459994 SOGA3Q5TF21 947 aa20.1■□□□□ 0.81
SDF4-204ENST00000459994 C16orf71Q8IYS4 520 aaPredicted RBP20.1■□□□□ 0.81
SDF4-204ENST00000459994 C8orf58Q8NAV2 365 aa20.1■□□□□ 0.81
SDF4-204ENST00000459994 UTP14AQ9BVJ6 771 aaKnown RBP20.1■□□□□ 0.81
SDF4-204ENST00000459994 SCN4AP35499 1836 aa20.09■□□□□ 0.81
SDF4-204ENST00000459994 TCERG1O14776 1098 aaKnown RBP20.09■□□□□ 0.81
SDF4-204ENST00000459994 HOXA10P31260 410 aaPredicted RBP20.09■□□□□ 0.81
SDF4-204ENST00000459994 ZNF541Q9H0D2 1346 aa20.08■□□□□ 0.81
SDF4-204ENST00000459994 HCLS1P14317 486 aaPredicted RBP20.08■□□□□ 0.81
SDF4-204ENST00000459994 TRMT2AQ8IZ69 625 aaKnown RBP20.08■□□□□ 0.81
SDF4-204ENST00000459994 RPGRQ92834 1020 aaKnown RBP20.08■□□□□ 0.81
SDF4-204ENST00000459994 PHAXQ9H814 394 aaKnown RBP20.08■□□□□ 0.81
SDF4-204ENST00000459994 SPINK5Q9NQ38 1064 aaPredicted RBP20.08■□□□□ 0.81
SDF4-204ENST00000459994 VEGFAP15692 232 aaPredicted RBP20.07■□□□□ 0.8
SDF4-204ENST00000459994 SLC10A5Q5PT55 438 aa20.07■□□□□ 0.8
SDF4-204ENST00000459994 TSPYL6Q8N831 410 aa20.07■□□□□ 0.8
SDF4-204ENST00000459994 CDCA7LQ96GN5 454 aa20.07■□□□□ 0.8
SDF4-204ENST00000459994 MYH16Q9H6N6 1097 aa20.07■□□□□ 0.8
SDF4-204ENST00000459994 DBF4Q9UBU7 674 aaPredicted RBP20.07■□□□□ 0.8
SDF4-204ENST00000459994 ATP5J2-PTCD1G3V325 749 aa20.06■□□□□ 0.8
SDF4-204ENST00000459994 POTEIP0CG38 1075 aa20.06■□□□□ 0.8
SDF4-204ENST00000459994 POTEJP0CG39 1038 aa20.06■□□□□ 0.8
SDF4-204ENST00000459994 LTBP1Q14766 1721 aa20.06■□□□□ 0.8
SDF4-204ENST00000459994 PLBD2Q8NHP8 589 aa20.06■□□□□ 0.8
SDF4-204ENST00000459994 TSR2Q969E8 191 aaKnown RBP20.06■□□□□ 0.8
SDF4-204ENST00000459994 CRAMP1Q96RY5 1269 aa20.06■□□□□ 0.8
SDF4-204ENST00000459994 ABCC4O15439 1325 aa20.05■□□□□ 0.8
SDF4-204ENST00000459994 LRRC37AA6NMS7 1700 aa20.05■□□□□ 0.8
SDF4-204ENST00000459994 PPEF1O14829 653 aaPredicted RBP20.05■□□□□ 0.8
SDF4-204ENST00000459994 IARSP41252 1262 aaKnown RBP20.05■□□□□ 0.8
SDF4-204ENST00000459994 HSP90AB3PQ58FF7 597 aa20.05■□□□□ 0.8
SDF4-204ENST00000459994 DPY19L2Q6NUT2 758 aa20.05■□□□□ 0.8
SDF4-204ENST00000459994 ANKRD13DQ6ZTN6 518 aa20.05■□□□□ 0.8
SDF4-204ENST00000459994 RTKN2Q8IZC4 609 aa20.05■□□□□ 0.8
SDF4-204ENST00000459994 RBM17Q96I25 401 aaKnown RBP20.05■□□□□ 0.8
SDF4-204ENST00000459994 ISCA1Q9BUE6 129 aa20.05■□□□□ 0.8
SDF4-204ENST00000459994 TRMT112Q9UI30 125 aaKnown RBP20.05■□□□□ 0.8
SDF4-204ENST00000459994 FSTL1Q12841 308 aa20.04■□□□□ 0.8
SDF4-204ENST00000459994 NLRP3Q96P20 1036 aa20.04■□□□□ 0.8
SDF4-204ENST00000459994 ADAMTSL1Q8N6G6 1762 aa20.03■□□□□ 0.8
SDF4-204ENST00000459994 APLP1P51693 650 aa20.03■□□□□ 0.8
SDF4-204ENST00000459994 DNAJC5GQ8N7S2 189 aa20.03■□□□□ 0.8
SDF4-204ENST00000459994 HYPKQ9NX55 129 aa20.03■□□□□ 0.8
SDF4-204ENST00000459994 FANCIQ9NVI1 1328 aa20.02■□□□□ 0.8
SDF4-204ENST00000459994 RTL5Q5HYW3 569 aaPredicted RBP20.02■□□□□ 0.8
SDF4-204ENST00000459994 SMC1BQ8NDV3 1235 aa20.02■□□□□ 0.8
SDF4-204ENST00000459994 FAM89AQ96GI7 184 aa20.02■□□□□ 0.8
SDF4-204ENST00000459994 PSMD1Q99460 953 aa20.02■□□□□ 0.8
SDF4-204ENST00000459994 DUOX1Q9NRD9 1551 aa20.02■□□□□ 0.8
SDF4-204ENST00000459994 SPEF2Q9C093 1822 aa20.02■□□□□ 0.79
SDF4-204ENST00000459994 SH3TC1Q8TE82 1336 aa20.02■□□□□ 0.79
SDF4-204ENST00000459994 RNF123Q5XPI4 1314 aa20.01■□□□□ 0.79
SDF4-204ENST00000459994 FZD9O00144 591 aa20■□□□□ 0.79
SDF4-204ENST00000459994 MYH3P11055 1940 aa20■□□□□ 0.79
SDF4-204ENST00000459994 CACNA1FO60840 1977 aa19.99■□□□□ 0.79
SDF4-204ENST00000459994 JARID2Q92833 1246 aaPredicted RBP19.98■□□□□ 0.79
SDF4-204ENST00000459994 L3MBTL3Q96JM7 780 aaPredicted RBP19.98■□□□□ 0.79
SDF4-204ENST00000459994 ATP6V0A2Q9Y487 856 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms