RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 RHPN1Q8TCX5 695 aa10.17□□□□□ -0.78
VPS50-208ENST00000458707 KCNB2Q92953 911 aa10.17□□□□□ -0.78
VPS50-208ENST00000458707 TMEM106CQ9BVX2 250 aa10.17□□□□□ -0.78
VPS50-208ENST00000458707 TPM3P06753 285 aa10.17□□□□□ -0.78
VPS50-208ENST00000458707 DNTTIP2Q5QJE6 756 aaKnown RBP10.17□□□□□ -0.78
VPS50-208ENST00000458707 NUTM1Q86Y26 1132 aa10.17□□□□□ -0.78
VPS50-208ENST00000458707 CNTROBQ8N137 903 aa10.17□□□□□ -0.78
VPS50-208ENST00000458707 ZNF710Q8N1W2 664 aa10.17□□□□□ -0.78
VPS50-208ENST00000458707 KIF1BPQ96EK5 621 aa10.17□□□□□ -0.78
VPS50-208ENST00000458707 IL1RAPL2Q9NP60 686 aa10.17□□□□□ -0.78
VPS50-208ENST00000458707 TTC41PQ6P2S7 1318 aa10.16□□□□□ -0.78
VPS50-208ENST00000458707 PPP1R42Q7Z4L9 355 aa10.16□□□□□ -0.78
VPS50-208ENST00000458707 ZNF830Q96NB3 372 aaPredicted RBP10.16□□□□□ -0.78
VPS50-208ENST00000458707 TM6SF1Q9BZW5 370 aa10.16□□□□□ -0.78
VPS50-208ENST00000458707 TTC12Q9H892 705 aaPredicted RBP10.16□□□□□ -0.78
VPS50-208ENST00000458707 HYPKQ9NX55 129 aa10.16□□□□□ -0.78
VPS50-208ENST00000458707 SMC3Q9UQE7 1217 aa10.16□□□□□ -0.78
VPS50-208ENST00000458707 SURF6O75683 361 aaKnown RBP10.15□□□□□ -0.78
VPS50-208ENST00000458707 PLCG2P16885 1265 aa10.15□□□□□ -0.78
VPS50-208ENST00000458707 VPS53Q5VIR6 699 aa10.15□□□□□ -0.78
VPS50-208ENST00000458707 KIAA1524Q8TCG1 905 aa10.15□□□□□ -0.78
VPS50-208ENST00000458707 ZSCAN31Q96LW9 406 aaPredicted RBP10.15□□□□□ -0.78
VPS50-208ENST00000458707 SH2B1Q9NRF2 756 aaPredicted RBP10.15□□□□□ -0.78
VPS50-208ENST00000458707 MTMR6Q9Y217 621 aa10.15□□□□□ -0.78
VPS50-208ENST00000458707 PLEKHG1Q9ULL1 1385 aa10.15□□□□□ -0.78
VPS50-208ENST00000458707 RGPD2P0DJD1 1756 aa10.15□□□□□ -0.78
VPS50-208ENST00000458707 SETD1BQ9UPS6 1966 aaKnown RBP10.15□□□□□ -0.78
VPS50-208ENST00000458707 IRX5P78411 483 aaPredicted RBP10.15□□□□□ -0.79
VPS50-208ENST00000458707 TAF7Q15545 349 aaPredicted RBP10.15□□□□□ -0.79
VPS50-208ENST00000458707 IL17REQ8NFR9 667 aa10.15□□□□□ -0.79
VPS50-208ENST00000458707 SIPA1L3O60292 1781 aaPredicted RBP10.14□□□□□ -0.79
VPS50-208ENST00000458707 TNRQ92752 1358 aa10.14□□□□□ -0.79
VPS50-208ENST00000458707 UBAP1LF5GYI3 381 aa10.14□□□□□ -0.79
VPS50-208ENST00000458707 AP5Z1O43299 807 aa10.14□□□□□ -0.79
VPS50-208ENST00000458707 FIBPO43427 364 aa10.14□□□□□ -0.79
VPS50-208ENST00000458707 CDK11BP21127 795 aaKnown RBP10.14□□□□□ -0.79
VPS50-208ENST00000458707 MMP14P50281 582 aa10.14□□□□□ -0.79
VPS50-208ENST00000458707 HSP90AB4PQ58FF6 505 aa10.14□□□□□ -0.79
VPS50-208ENST00000458707 SLAIN1Q8ND83 568 aa10.14□□□□□ -0.79
VPS50-208ENST00000458707 ZSWIM6Q9HCJ5 1215 aa10.14□□□□□ -0.79
VPS50-208ENST00000458707 KIF3AQ9Y496 699 aa10.14□□□□□ -0.79
VPS50-208ENST00000458707 LAMA4Q16363 1823 aa10.14□□□□□ -0.79
VPS50-208ENST00000458707 ADGRL3Q9HAR2 1447 aa10.14□□□□□ -0.79
VPS50-208ENST00000458707 ELP1O95163 1332 aa10.14□□□□□ -0.79
VPS50-208ENST00000458707 CCDC171Q6TFL3 1326 aa10.14□□□□□ -0.79
VPS50-208ENST00000458707 CEMIPQ8WUJ3 1361 aa10.13□□□□□ -0.79
VPS50-208ENST00000458707 GLRX3O76003 335 aaKnown RBP10.13□□□□□ -0.79
VPS50-208ENST00000458707 LARGE1O95461 756 aa10.13□□□□□ -0.79
VPS50-208ENST00000458707 MAP4K4O95819 1239 aaPredicted RBP10.13□□□□□ -0.79
VPS50-208ENST00000458707 CASTP20810 708 aaKnown RBP10.13□□□□□ -0.79
VPS50-208ENST00000458707 GJB2P29033 226 aa10.13□□□□□ -0.79
VPS50-208ENST00000458707 GIMAP6Q6P9H5 292 aa10.13□□□□□ -0.79
VPS50-208ENST00000458707 RUFY2Q8WXA3 655 aa10.13□□□□□ -0.79
VPS50-208ENST00000458707 KCNF1Q9H3M0 494 aa10.13□□□□□ -0.79
VPS50-208ENST00000458707 PHRF1Q9P1Y6 1649 aaKnown RBP10.13□□□□□ -0.79
VPS50-208ENST00000458707 SRGAP3O43295 1099 aa10.13□□□□□ -0.79
VPS50-208ENST00000458707 HOXB7P09629 217 aa10.13□□□□□ -0.79
VPS50-208ENST00000458707 CCDC192P0DO97 292 aa10.13□□□□□ -0.79
VPS50-208ENST00000458707 AMPHP49418 695 aa10.13□□□□□ -0.79
VPS50-208ENST00000458707 DNM1Q05193 864 aaKnown RBP10.13□□□□□ -0.79
VPS50-208ENST00000458707 ST3GAL1Q11201 340 aa10.13□□□□□ -0.79
VPS50-208ENST00000458707 MTX1Q13505 466 aa10.13□□□□□ -0.79
VPS50-208ENST00000458707 HDGFL1Q5TGJ6 251 aa10.13□□□□□ -0.79
VPS50-208ENST00000458707 CDAN1Q8IWY9 1227 aa10.13□□□□□ -0.79
VPS50-208ENST00000458707 NECTIN2Q92692 538 aa10.13□□□□□ -0.79
VPS50-208ENST00000458707 PHAXQ9H814 394 aaKnown RBP10.13□□□□□ -0.79
VPS50-208ENST00000458707 GOLGA6L6A8MZA4 724 aa10.12□□□□□ -0.79
VPS50-208ENST00000458707 DMTNQ08495 405 aa10.12□□□□□ -0.79
VPS50-208ENST00000458707 NECTIN1Q15223 517 aa10.12□□□□□ -0.79
VPS50-208ENST00000458707 BEND3Q5T5X7 828 aa10.12□□□□□ -0.79
VPS50-208ENST00000458707 CWC27Q6UX04 472 aaKnown RBP10.12□□□□□ -0.79
VPS50-208ENST00000458707 C17orf53Q8N3J3 647 aaPredicted RBP10.12□□□□□ -0.79
VPS50-208ENST00000458707 MPNDQ8N594 471 aa10.12□□□□□ -0.79
VPS50-208ENST00000458707 DIAPH3Q9NSV4 1193 aa10.12□□□□□ -0.79
VPS50-208ENST00000458707 PDRG1Q9NUG6 133 aa10.12□□□□□ -0.79
VPS50-208ENST00000458707 SPG7Q9UQ90 795 aa10.12□□□□□ -0.79
VPS50-208ENST00000458707 SOX12O15370 315 aa10.11□□□□□ -0.79
VPS50-208ENST00000458707 CTIFO43310 598 aaKnown RBP10.11□□□□□ -0.79
VPS50-208ENST00000458707 NBPF7P0C2Y1 421 aaPredicted RBP10.11□□□□□ -0.79
VPS50-208ENST00000458707 PTH1RQ03431 593 aa10.11□□□□□ -0.79
VPS50-208ENST00000458707 ADCK5Q3MIX3 580 aa10.11□□□□□ -0.79
VPS50-208ENST00000458707 CCDC83Q8IWF9 413 aa10.11□□□□□ -0.79
VPS50-208ENST00000458707 RGS22Q8NE09 1264 aa10.11□□□□□ -0.79
VPS50-208ENST00000458707 JARID2Q92833 1246 aaPredicted RBP10.11□□□□□ -0.79
VPS50-208ENST00000458707 BCL2L12Q9HB09 334 aa10.11□□□□□ -0.79
VPS50-208ENST00000458707 SNRKQ9NRH2 765 aa10.11□□□□□ -0.79
VPS50-208ENST00000458707 CYP46A1Q9Y6A2 500 aa10.11□□□□□ -0.79
VPS50-208ENST00000458707 SLIT1O75093 1534 aa10.11□□□□□ -0.79
VPS50-208ENST00000458707 CPA1P15085 419 aa10.1□□□□□ -0.79
VPS50-208ENST00000458707 ZSCAN20P17040 1043 aaPredicted RBP10.1□□□□□ -0.79
VPS50-208ENST00000458707 HOXC9P31274 260 aa10.1□□□□□ -0.79
VPS50-208ENST00000458707 ME3Q16798 604 aa10.1□□□□□ -0.79
VPS50-208ENST00000458707 FAM200AQ8TCP9 573 aa10.1□□□□□ -0.79
VPS50-208ENST00000458707 ANKRD7Q92527 254 aa10.1□□□□□ -0.79
VPS50-208ENST00000458707 ALDH8A1Q9H2A2 487 aaPredicted RBP10.1□□□□□ -0.79
VPS50-208ENST00000458707 PYCARDQ9ULZ3 195 aa10.1□□□□□ -0.79
VPS50-208ENST00000458707 ANKARQ7Z5J8 1434 aa10.1□□□□□ -0.79
VPS50-208ENST00000458707 NUTM2FA1L443 756 aa10.1□□□□□ -0.79
VPS50-208ENST00000458707 KIF20AO95235 890 aa10.1□□□□□ -0.79
VPS50-208ENST00000458707 MLECQ14165 292 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms