RNA–Protein interactions for RNA: ENST00000458294.5

PBRM1-218, Transcript of polybromo 1, humanhuman

TSL 3

Gene PBRM1, Length 476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-218ENST00000458294 HOXA10P31260 410 aaPredicted RBP34.8■■■■□ 3.16
PBRM1-218ENST00000458294 PNMA8AQ86V59 439 aaPredicted RBP34.8■■■■□ 3.16
PBRM1-218ENST00000458294 GPC2Q8N158 579 aa34.8■■■■□ 3.16
PBRM1-218ENST00000458294 ZBTB3Q9H5J0 574 aa34.8■■■■□ 3.16
PBRM1-218ENST00000458294 ITGBL1O95965 494 aaPredicted RBP34.79■■■■□ 3.16
PBRM1-218ENST00000458294 GPTP24298 496 aa34.79■■■■□ 3.16
PBRM1-218ENST00000458294 GRIPAP1Q4V328 841 aa34.79■■■■□ 3.16
PBRM1-218ENST00000458294 JDP2Q8WYK2 163 aa34.79■■■■□ 3.16
PBRM1-218ENST00000458294 RNF123Q5XPI4 1314 aa34.78■■■■□ 3.16
PBRM1-218ENST00000458294 TMEM88BA6NKF7 163 aa34.77■■■■□ 3.16
PBRM1-218ENST00000458294 SUSD4Q5VX71 490 aa34.77■■■■□ 3.16
PBRM1-218ENST00000458294 ZNF34Q8IZ26 560 aa34.77■■■■□ 3.16
PBRM1-218ENST00000458294 CLEC11AQ9Y240 323 aa34.77■■■■□ 3.16
PBRM1-218ENST00000458294 GIGYF2Q6Y7W6 1299 aaKnown RBP34.76■■■■□ 3.16
PBRM1-218ENST00000458294 CAPN15O75808 1086 aa34.75■■■■□ 3.15
PBRM1-218ENST00000458294 NTSR2O95665 410 aa34.74■■■■□ 3.15
PBRM1-218ENST00000458294 RBM17Q96I25 401 aaKnown RBP34.74■■■■□ 3.15
PBRM1-218ENST00000458294 CRAMP1Q96RY5 1269 aa34.74■■■■□ 3.15
PBRM1-218ENST00000458294 EIF6P56537 245 aaKnown RBP34.73■■■■□ 3.15
PBRM1-218ENST00000458294 PPP1R42Q7Z4L9 355 aa34.73■■■■□ 3.15
PBRM1-218ENST00000458294 TSPYL4Q9UJ04 414 aa34.73■■■■□ 3.15
PBRM1-218ENST00000458294 PARP10Q53GL7 1025 aa34.72■■■■□ 3.15
PBRM1-218ENST00000458294 COL4A5P29400 1685 aa34.72■■■■□ 3.15
PBRM1-218ENST00000458294 PPEF1O14829 653 aaPredicted RBP34.7■■■■□ 3.15
PBRM1-218ENST00000458294 CNTROBQ8N137 903 aa34.69■■■■□ 3.14
PBRM1-218ENST00000458294 BABAM1Q9NWV8 329 aa34.69■■■■□ 3.14
PBRM1-218ENST00000458294 MAP1SQ66K74 1059 aaPredicted RBP34.68■■■■□ 3.14
PBRM1-218ENST00000458294 LRP10Q7Z4F1 713 aa34.68■■■■□ 3.14
PBRM1-218ENST00000458294 LARGE2Q8N3Y3 721 aa34.68■■■■□ 3.14
PBRM1-218ENST00000458294 NLRP3Q96P20 1036 aa34.68■■■■□ 3.14
PBRM1-218ENST00000458294 GJA3Q9Y6H8 435 aa34.68■■■■□ 3.14
PBRM1-218ENST00000458294 LMOD1P29536 600 aaPredicted RBP34.66■■■■□ 3.14
PBRM1-218ENST00000458294 VEGFBP49765 207 aa34.66■■■■□ 3.14
PBRM1-218ENST00000458294 RIPK4P57078 832 aa34.66■■■■□ 3.14
PBRM1-218ENST00000458294 PDIA6Q15084 440 aa34.66■■■■□ 3.14
PBRM1-218ENST00000458294 LTBP1Q14766 1721 aa34.65■■■■□ 3.14
PBRM1-218ENST00000458294 FOXN1O15353 648 aa34.65■■■■□ 3.14
PBRM1-218ENST00000458294 C3orf67Q6ZVT6 689 aa34.65■■■■□ 3.14
PBRM1-218ENST00000458294 EIF2S2P20042 333 aaKnown RBP34.64■■■■□ 3.14
PBRM1-218ENST00000458294 SLC10A5Q5PT55 438 aa34.64■■■■□ 3.14
PBRM1-218ENST00000458294 UTP14AQ9BVJ6 771 aaKnown RBP34.64■■■■□ 3.14
PBRM1-218ENST00000458294 TMX4Q9H1E5 349 aaPredicted RBP34.64■■■■□ 3.14
PBRM1-218ENST00000458294 LMOD3Q0VAK6 560 aa34.63■■■■□ 3.13
PBRM1-218ENST00000458294 ANKRD36CQ5JPF3 1778 aa34.62■■■■□ 3.13
PBRM1-218ENST00000458294 RASSF10A6NK89 507 aa34.62■■■■□ 3.13
PBRM1-218ENST00000458294 TCERG1O14776 1098 aaKnown RBP34.62■■■■□ 3.13
PBRM1-218ENST00000458294 SCNN1DP51172 638 aa34.62■■■■□ 3.13
PBRM1-218ENST00000458294 NIM1KQ8IY84 436 aa34.62■■■■□ 3.13
PBRM1-218ENST00000458294 AIDAQ96BJ3 306 aa34.62■■■■□ 3.13
PBRM1-218ENST00000458294 VPS33BQ9H267 617 aa34.62■■■■□ 3.13
PBRM1-218ENST00000458294 PRDM10Q9NQV6 1147 aa34.61■■■■□ 3.13
PBRM1-218ENST00000458294 ATP6V0A2Q9Y487 856 aa34.61■■■■□ 3.13
PBRM1-218ENST00000458294 RALBP1Q15311 655 aa34.6■■■■□ 3.13
PBRM1-218ENST00000458294 PROSER3Q2NL68 480 aa34.6■■■■□ 3.13
PBRM1-218ENST00000458294 DEFB115Q30KQ5 88 aa34.6■■■■□ 3.13
PBRM1-218ENST00000458294 HSP90AB3PQ58FF7 597 aa34.6■■■■□ 3.13
PBRM1-218ENST00000458294 SLC51AQ86UW1 340 aa34.6■■■■□ 3.13
PBRM1-218ENST00000458294 TMPOP42166 694 aaKnown RBP34.59■■■■□ 3.13
PBRM1-218ENST00000458294 PPIP5K2O43314 1243 aa34.58■■■■□ 3.13
PBRM1-218ENST00000458294 CTCFP49711 727 aaPredicted RBP34.58■■■■□ 3.13
PBRM1-218ENST00000458294 ABCC4O15439 1325 aa34.57■■■■□ 3.13
PBRM1-218ENST00000458294 ANXA1P04083 346 aa34.57■■■■□ 3.12
PBRM1-218ENST00000458294 EPS15P42566 896 aa34.57■■■■□ 3.12
PBRM1-218ENST00000458294 USP50Q70EL3 339 aaPredicted RBP34.57■■■■□ 3.12
PBRM1-218ENST00000458294 DDX21Q9NR30 783 aaKnown RBP eCLIP34.57■■■■□ 3.12
PBRM1-218ENST00000458294 WBP1LQ9NX94 342 aa34.57■■■■□ 3.12
PBRM1-218ENST00000458294 SUPT20HQ8NEM7 779 aa34.56■■■■□ 3.12
PBRM1-218ENST00000458294 LAMB2P55268 1798 aa34.56■■■■□ 3.12
PBRM1-218ENST00000458294 AOC3Q16853 763 aa34.55■■■■□ 3.12
PBRM1-218ENST00000458294 COPS6Q7L5N1 327 aa34.55■■■■□ 3.12
PBRM1-218ENST00000458294 ABT1Q9ULW3 272 aaKnown RBP34.55■■■■□ 3.12
PBRM1-218ENST00000458294 RTFDC1Q9BY42 306 aaPredicted RBP34.54■■■■□ 3.12
PBRM1-218ENST00000458294 BBOX1O75936 387 aa34.53■■■■□ 3.12
PBRM1-218ENST00000458294 NLRP10Q86W26 655 aa34.53■■■■□ 3.12
PBRM1-218ENST00000458294 XAGE3Q8WTP9 111 aa34.52■■■■□ 3.12
PBRM1-218ENST00000458294 WDR33Q9C0J8 1336 aaKnown RBP34.52■■■■□ 3.12
PBRM1-218ENST00000458294 AIMP1Q12904 312 aaKnown RBP34.51■■■■□ 3.12
PBRM1-218ENST00000458294 SP8Q8IXZ3 490 aa34.51■■■■□ 3.12
PBRM1-218ENST00000458294 ZNRF3Q9ULT6 936 aa34.51■■■■□ 3.12
PBRM1-218ENST00000458294 TCIRG1Q13488 830 aa34.5■■■■□ 3.11
PBRM1-218ENST00000458294 DPP8Q6V1X1 898 aaPredicted RBP34.5■■■■□ 3.11
PBRM1-218ENST00000458294 NECTIN2Q92692 538 aa34.5■■■■□ 3.11
PBRM1-218ENST00000458294 GPRC5DQ9NZD1 345 aa34.5■■■■□ 3.11
PBRM1-218ENST00000458294 TRPM7Q96QT4 1865 aa34.5■■■■□ 3.11
PBRM1-218ENST00000458294 MAP2K1Q02750 393 aaPredicted RBP34.49■■■■□ 3.11
PBRM1-218ENST00000458294 ADARB2Q9NS39 739 aaKnown RBP34.49■■■■□ 3.11
PBRM1-218ENST00000458294 SH3TC1Q8TE82 1336 aa34.49■■■■□ 3.11
PBRM1-218ENST00000458294 HCLS1P14317 486 aaPredicted RBP34.48■■■■□ 3.11
PBRM1-218ENST00000458294 DDX46Q7L014 1031 aaKnown RBP34.48■■■■□ 3.11
PBRM1-218ENST00000458294 TRMT112Q9UI30 125 aaKnown RBP34.48■■■■□ 3.11
PBRM1-218ENST00000458294 CHL1O00533 1208 aa34.47■■■■□ 3.11
PBRM1-218ENST00000458294 CXCL9Q07325 125 aa34.47■■■■□ 3.11
PBRM1-218ENST00000458294 MPNDQ8N594 471 aa34.47■■■■□ 3.11
PBRM1-218ENST00000458294 THSD7BQ9C0I4 1608 aa34.47■■■■□ 3.11
PBRM1-218ENST00000458294 GRAPQ13588 217 aa34.46■■■■□ 3.11
PBRM1-218ENST00000458294 GRAPLQ8TC17 118 aaPredicted RBP34.46■■■■□ 3.11
PBRM1-218ENST00000458294 LBX1P52954 281 aa34.45■■■■□ 3.11
PBRM1-218ENST00000458294 KIAA2012Q0VF49 1180 aa34.45■■■■□ 3.11
PBRM1-218ENST00000458294 MYBBP1AQ9BQG0 1328 aaKnown RBP34.45■■■■□ 3.11
PBRM1-218ENST00000458294 CDHR2Q9BYE9 1310 aa34.45■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms