RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 GTF2E1P29083 439 aaPredicted RBP20.68■□□□□ 0.9
CHCHD3-204ENST00000457942 CCDC146Q8IYE0 955 aa20.68■□□□□ 0.9
CHCHD3-204ENST00000457942 CNTROBQ8N137 903 aa20.68■□□□□ 0.9
CHCHD3-204ENST00000457942 IARSP41252 1262 aaKnown RBP20.67■□□□□ 0.9
CHCHD3-204ENST00000457942 FMR1Q06787 632 aaKnown RBP eCLIP20.67■□□□□ 0.94e-14■■■■■ 87.5
CHCHD3-204ENST00000457942 HLFQ16534 295 aa20.67■□□□□ 0.9
CHCHD3-204ENST00000457942 DEFB115Q30KQ5 88 aa20.67■□□□□ 0.9
CHCHD3-204ENST00000457942 TPTE2Q6XPS3 522 aa20.67■□□□□ 0.9
CHCHD3-204ENST00000457942 GJA3Q9Y6H8 435 aa20.67■□□□□ 0.9
CHCHD3-204ENST00000457942 NUP98P52948 1817 aa20.67■□□□□ 0.9
CHCHD3-204ENST00000457942 RASSF10A6NK89 507 aa20.66■□□□□ 0.9
CHCHD3-204ENST00000457942 NEUROD2Q15784 382 aa20.66■□□□□ 0.9
CHCHD3-204ENST00000457942 WDR33Q9C0J8 1336 aaKnown RBP20.66■□□□□ 0.9
CHCHD3-204ENST00000457942 COL4A5P29400 1685 aa20.66■□□□□ 0.9
CHCHD3-204ENST00000457942 LTBP1Q14766 1721 aa20.66■□□□□ 0.9
CHCHD3-204ENST00000457942 RGL2O15211 777 aa20.65■□□□□ 0.9
CHCHD3-204ENST00000457942 TMPOP42166 694 aaKnown RBP20.65■□□□□ 0.9
CHCHD3-204ENST00000457942 SLC51AQ86UW1 340 aa20.65■□□□□ 0.9
CHCHD3-204ENST00000457942 SYNE4Q8N205 404 aa20.65■□□□□ 0.9
CHCHD3-204ENST00000457942 MAP3K15Q6ZN16 1313 aa20.64■□□□□ 0.89
CHCHD3-204ENST00000457942 THSD7BQ9C0I4 1608 aa20.64■□□□□ 0.89
CHCHD3-204ENST00000457942 ABCC12Q96J65 1359 aa20.63■□□□□ 0.89
CHCHD3-204ENST00000457942 EIF2S2P20042 333 aaKnown RBP20.63■□□□□ 0.89
CHCHD3-204ENST00000457942 TTLL7Q6ZT98 887 aa20.63■□□□□ 0.89
CHCHD3-204ENST00000457942 PNMA8AQ86V59 439 aaPredicted RBP20.63■□□□□ 0.89
CHCHD3-204ENST00000457942 RTKN2Q8IZC4 609 aa20.63■□□□□ 0.89
CHCHD3-204ENST00000457942 ZBTB3Q9H5J0 574 aa20.63■□□□□ 0.89
CHCHD3-204ENST00000457942 TSKSQ9UJT2 592 aa20.63■□□□□ 0.89
CHCHD3-204ENST00000457942 ERVV-1B6SEH8 477 aa20.62■□□□□ 0.89
CHCHD3-204ENST00000457942 SLC34A2O95436 690 aa20.62■□□□□ 0.89
CHCHD3-204ENST00000457942 NYXQ9GZU5 481 aa20.62■□□□□ 0.89
CHCHD3-204ENST00000457942 ERBB4Q15303 1308 aa20.61■□□□□ 0.89
CHCHD3-204ENST00000457942 CCDC85CA6NKD9 419 aa20.61■□□□□ 0.89
CHCHD3-204ENST00000457942 FZD9O00144 591 aa20.61■□□□□ 0.89
CHCHD3-204ENST00000457942 GPTP24298 496 aa20.61■□□□□ 0.89
CHCHD3-204ENST00000457942 MAP2K1Q02750 393 aaPredicted RBP20.61■□□□□ 0.89
CHCHD3-204ENST00000457942 CYP4F22Q6NT55 531 aa20.61■□□□□ 0.89
CHCHD3-204ENST00000457942 GPC2Q8N158 579 aa20.61■□□□□ 0.89
CHCHD3-204ENST00000457942 RUNDC1Q96C34 613 aa20.61■□□□□ 0.89
CHCHD3-204ENST00000457942 DDX21Q9NR30 783 aaKnown RBP eCLIP20.61■□□□□ 0.89
CHCHD3-204ENST00000457942 LAS1LQ9Y4W2 734 aaKnown RBP20.61■□□□□ 0.89
CHCHD3-204ENST00000457942 NUTM1Q86Y26 1132 aa20.6■□□□□ 0.89
CHCHD3-204ENST00000457942 JDP2Q8WYK2 163 aa20.6■□□□□ 0.89
CHCHD3-204ENST00000457942 TRAF5O00463 557 aa20.59■□□□□ 0.89
CHCHD3-204ENST00000457942 TCERG1O14776 1098 aaKnown RBP20.59■□□□□ 0.89
CHCHD3-204ENST00000457942 LMOD1P29536 600 aaPredicted RBP20.59■□□□□ 0.89
CHCHD3-204ENST00000457942 NECTIN2Q92692 538 aa20.59■□□□□ 0.89
CHCHD3-204ENST00000457942 CAPNS2Q96L46 248 aa20.59■□□□□ 0.89
CHCHD3-204ENST00000457942 BABAM1Q9NWV8 329 aa20.59■□□□□ 0.89
CHCHD3-204ENST00000457942 SNED1Q8TER0 1413 aa20.59■□□□□ 0.89
CHCHD3-204ENST00000457942 KLRG2A4D1S0 409 aaPredicted RBP20.58■□□□□ 0.89
CHCHD3-204ENST00000457942 EIF6P56537 245 aaKnown RBP20.58■□□□□ 0.89
CHCHD3-204ENST00000457942 CFAP44Q96MT7 982 aa20.58■□□□□ 0.89
CHCHD3-204ENST00000457942 EPS15P42566 896 aa20.57■□□□□ 0.88
CHCHD3-204ENST00000457942 PRKRIP1Q9H875 184 aaPredicted RBP20.57■□□□□ 0.88
CHCHD3-204ENST00000457942 AOC2O75106 756 aa20.56■□□□□ 0.88
CHCHD3-204ENST00000457942 ANXA1P04083 346 aa20.56■□□□□ 0.88
CHCHD3-204ENST00000457942 ALDH1B1P30837 517 aa20.56■□□□□ 0.88
CHCHD3-204ENST00000457942 SCNN1DP51172 638 aa20.56■□□□□ 0.88
CHCHD3-204ENST00000457942 RPGRQ92834 1020 aaKnown RBP20.56■□□□□ 0.88
CHCHD3-204ENST00000457942 BEGAINQ9BUH8 593 aa20.56■□□□□ 0.88
CHCHD3-204ENST00000457942 ADAMTS8Q9UP79 889 aa20.56■□□□□ 0.88
CHCHD3-204ENST00000457942 UBN2Q6ZU65 1347 aa20.55■□□□□ 0.88
CHCHD3-204ENST00000457942 LARGE2Q8N3Y3 721 aa20.55■□□□□ 0.88
CHCHD3-204ENST00000457942 PSMD1Q99460 953 aa20.55■□□□□ 0.88
CHCHD3-204ENST00000457942 IBTKQ9P2D0 1353 aaPredicted RBP20.55■□□□□ 0.88
CHCHD3-204ENST00000457942 PROSER3Q2NL68 480 aa20.54■□□□□ 0.88
CHCHD3-204ENST00000457942 GIGYF2Q6Y7W6 1299 aaKnown RBP20.54■□□□□ 0.88
CHCHD3-204ENST00000457942 GPR101Q96P66 508 aaPredicted RBP20.54■□□□□ 0.88
CHCHD3-204ENST00000457942 ANKRD36CQ5JPF3 1778 aa20.54■□□□□ 0.88
CHCHD3-204ENST00000457942 MLLT1Q03111 559 aaPredicted RBP20.53■□□□□ 0.88
CHCHD3-204ENST00000457942 AIMP1Q12904 312 aaKnown RBP20.53■□□□□ 0.88
CHCHD3-204ENST00000457942 SUSD4Q5VX71 490 aa20.53■□□□□ 0.88
CHCHD3-204ENST00000457942 PPP1R42Q7Z4L9 355 aa20.53■□□□□ 0.88
CHCHD3-204ENST00000457942 TRIM35Q9UPQ4 493 aa20.53■□□□□ 0.88
CHCHD3-204ENST00000457942 TRPM7Q96QT4 1865 aa20.52■□□□□ 0.88
CHCHD3-204ENST00000457942 ECE1P42892 770 aa20.52■□□□□ 0.88
CHCHD3-204ENST00000457942 PDIA6Q15084 440 aa20.52■□□□□ 0.88
CHCHD3-204ENST00000457942 PARP10Q53GL7 1025 aa20.52■□□□□ 0.88
CHCHD3-204ENST00000457942 ZNF34Q8IZ26 560 aa20.52■□□□□ 0.88
CHCHD3-204ENST00000457942 PPEF1O14829 653 aaPredicted RBP20.51■□□□□ 0.87
CHCHD3-204ENST00000457942 KRT24Q2M2I5 525 aa20.51■□□□□ 0.87
CHCHD3-204ENST00000457942 CRY2Q49AN0 593 aa20.51■□□□□ 0.87
CHCHD3-204ENST00000457942 CST9Q5W186 159 aa20.51■□□□□ 0.87
CHCHD3-204ENST00000457942 RIC1Q4ADV7 1423 aa20.51■□□□□ 0.87
CHCHD3-204ENST00000457942 CHL1O00533 1208 aa20.5■□□□□ 0.87
CHCHD3-204ENST00000457942 NTSR2O95665 410 aa20.5■□□□□ 0.87
CHCHD3-204ENST00000457942 COPS6Q7L5N1 327 aa20.5■□□□□ 0.87
CHCHD3-204ENST00000457942 NIM1KQ8IY84 436 aa20.5■□□□□ 0.87
CHCHD3-204ENST00000457942 XAGE3Q8WTP9 111 aa20.5■□□□□ 0.87
CHCHD3-204ENST00000457942 ZNF408Q9H9D4 720 aa20.5■□□□□ 0.87
CHCHD3-204ENST00000457942 PPIP5K2O43314 1243 aa20.49■□□□□ 0.87
CHCHD3-204ENST00000457942 AOC3Q16853 763 aa20.49■□□□□ 0.87
CHCHD3-204ENST00000457942 HSP90AB3PQ58FF7 597 aa20.49■□□□□ 0.87
CHCHD3-204ENST00000457942 HDGFL1Q5TGJ6 251 aa20.49■□□□□ 0.87
CHCHD3-204ENST00000457942 LRP10Q7Z4F1 713 aa20.49■□□□□ 0.87
CHCHD3-204ENST00000457942 RBM17Q96I25 401 aaKnown RBP20.49■□□□□ 0.87
CHCHD3-204ENST00000457942 UTP14AQ9BVJ6 771 aaKnown RBP20.49■□□□□ 0.87
CHCHD3-204ENST00000457942 TLL2Q9Y6L7 1015 aa20.49■□□□□ 0.87
CHCHD3-204ENST00000457942 C3orf67Q6ZVT6 689 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms