RNA–Protein interactions for RNA: ENST00000456222.1

SEC22C-213, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-213ENST00000456222 FKBP4Q02790 459 aaKnown RBP eCLIP28.48■■■□□ 2.15
SEC22C-213ENST00000456222 ALDH1B1P30837 517 aa28.46■■■□□ 2.15
SEC22C-213ENST00000456222 COPS6Q7L5N1 327 aa28.46■■■□□ 2.15
SEC22C-213ENST00000456222 XAGE3Q8WTP9 111 aa28.46■■■□□ 2.15
SEC22C-213ENST00000456222 AIMP1Q12904 312 aaKnown RBP28.45■■■□□ 2.14
SEC22C-213ENST00000456222 HOXA10P31260 410 aaPredicted RBP28.44■■■□□ 2.14
SEC22C-213ENST00000456222 ZNF541Q9H0D2 1346 aa28.43■■■□□ 2.14
SEC22C-213ENST00000456222 LAMB2P55268 1798 aa28.43■■■□□ 2.14
SEC22C-213ENST00000456222 COL4A5P29400 1685 aa28.43■■■□□ 2.14
SEC22C-213ENST00000456222 POTEIP0CG38 1075 aa28.43■■■□□ 2.14
SEC22C-213ENST00000456222 POTEJP0CG39 1038 aa28.43■■■□□ 2.14
SEC22C-213ENST00000456222 RTKN2Q8IZC4 609 aa28.43■■■□□ 2.14
SEC22C-213ENST00000456222 RPGRQ92834 1020 aaKnown RBP28.43■■■□□ 2.14
SEC22C-213ENST00000456222 PARP10Q53GL7 1025 aa28.42■■■□□ 2.14
SEC22C-213ENST00000456222 SYNE4Q8N205 404 aa28.42■■■□□ 2.14
SEC22C-213ENST00000456222 DDX21Q9NR30 783 aaKnown RBP eCLIP28.42■■■□□ 2.14
SEC22C-213ENST00000456222 CHPF2Q9P2E5 772 aa28.42■■■□□ 2.14
SEC22C-213ENST00000456222 PPP1R42Q7Z4L9 355 aa28.41■■■□□ 2.14
SEC22C-213ENST00000456222 ZNF428Q96B54 188 aa28.4■■■□□ 2.14
SEC22C-213ENST00000456222 UTP14AQ9BVJ6 771 aaKnown RBP28.4■■■□□ 2.14
SEC22C-213ENST00000456222 APAF1O14727 1248 aa28.39■■■□□ 2.14
SEC22C-213ENST00000456222 IARSP41252 1262 aaKnown RBP28.39■■■□□ 2.14
SEC22C-213ENST00000456222 NLRP10Q86W26 655 aa28.39■■■□□ 2.14
SEC22C-213ENST00000456222 TCERG1O14776 1098 aaKnown RBP28.38■■■□□ 2.13
SEC22C-213ENST00000456222 SLC10A5Q5PT55 438 aa28.38■■■□□ 2.13
SEC22C-213ENST00000456222 KLRG1Q96E93 195 aa28.38■■■□□ 2.13
SEC22C-213ENST00000456222 CFAP44Q96MT7 982 aa28.38■■■□□ 2.13
SEC22C-213ENST00000456222 CRAMP1Q96RY5 1269 aa28.38■■■□□ 2.13
SEC22C-213ENST00000456222 MBIPQ9NS73 344 aa28.38■■■□□ 2.13
SEC22C-213ENST00000456222 SCN4AP35499 1836 aa28.38■■■□□ 2.13
SEC22C-213ENST00000456222 CCDC184Q52MB2 194 aa28.37■■■□□ 2.13
SEC22C-213ENST00000456222 HDGFL1Q5TGJ6 251 aa28.37■■■□□ 2.13
SEC22C-213ENST00000456222 L3MBTL3Q96JM7 780 aaPredicted RBP28.37■■■□□ 2.13
SEC22C-213ENST00000456222 PSMD1Q99460 953 aa28.37■■■□□ 2.13
SEC22C-213ENST00000456222 TAF1P21675 1872 aa28.36■■■□□ 2.13
SEC22C-213ENST00000456222 ZNF853P0CG23 659 aa28.36■■■□□ 2.13
SEC22C-213ENST00000456222 TCIRG1Q13488 830 aa28.36■■■□□ 2.13
SEC22C-213ENST00000456222 RBM17Q96I25 401 aaKnown RBP28.36■■■□□ 2.13
SEC22C-213ENST00000456222 PPEF1O14829 653 aaPredicted RBP28.35■■■□□ 2.13
SEC22C-213ENST00000456222 HCLS1P14317 486 aaPredicted RBP28.35■■■□□ 2.13
SEC22C-213ENST00000456222 DUSP27Q5VZP5 1158 aa28.35■■■□□ 2.13
SEC22C-213ENST00000456222 NLRP3Q96P20 1036 aa28.35■■■□□ 2.13
SEC22C-213ENST00000456222 FZD9O00144 591 aa28.34■■■□□ 2.13
SEC22C-213ENST00000456222 HOXB7P09629 217 aa28.33■■■□□ 2.13
SEC22C-213ENST00000456222 HSP90AB3PQ58FF7 597 aa28.33■■■□□ 2.13
SEC22C-213ENST00000456222 CC2D2BQ6DHV5 1058 aa28.33■■■□□ 2.13
SEC22C-213ENST00000456222 TAF1DQ9H5J8 278 aaPredicted RBP28.33■■■□□ 2.13
SEC22C-213ENST00000456222 ABCC4O15439 1325 aa28.33■■■□□ 2.13
SEC22C-213ENST00000456222 CHADLQ6NUI6 762 aa28.32■■■□□ 2.12
SEC22C-213ENST00000456222 DDX60Q8IY21 1712 aaKnown RBP28.32■■■□□ 2.12
SEC22C-213ENST00000456222 JMYQ8N9B5 988 aa28.31■■■□□ 2.12
SEC22C-213ENST00000456222 DBF4Q9UBU7 674 aaPredicted RBP28.31■■■□□ 2.12
SEC22C-213ENST00000456222 TRMT112Q9UI30 125 aaKnown RBP28.31■■■□□ 2.12
SEC22C-213ENST00000456222 RNF123Q5XPI4 1314 aa28.3■■■□□ 2.12
SEC22C-213ENST00000456222 PLBD2Q8NHP8 589 aa28.3■■■□□ 2.12
SEC22C-213ENST00000456222 IQCA1LA6NCM1 817 aa28.29■■■□□ 2.12
SEC22C-213ENST00000456222 ADAMTSL1Q8N6G6 1762 aa28.29■■■□□ 2.12
SEC22C-213ENST00000456222 SH3TC1Q8TE82 1336 aa28.28■■■□□ 2.12
SEC22C-213ENST00000456222 ATP5J2-PTCD1G3V325 749 aa28.28■■■□□ 2.12
SEC22C-213ENST00000456222 ANKRD13DQ6ZTN6 518 aa28.28■■■□□ 2.12
SEC22C-213ENST00000456222 ISCA1Q9BUE6 129 aa28.28■■■□□ 2.12
SEC22C-213ENST00000456222 IFT57Q9NWB7 429 aa28.28■■■□□ 2.12
SEC22C-213ENST00000456222 ATP6V0A2Q9Y487 856 aa28.28■■■□□ 2.12
SEC22C-213ENST00000456222 LTBP1Q14766 1721 aa28.28■■■□□ 2.12
SEC22C-213ENST00000456222 ELL2O00472 640 aaPredicted RBP28.27■■■□□ 2.12
SEC22C-213ENST00000456222 COL4A1P02462 1669 aa28.26■■■□□ 2.12
SEC22C-213ENST00000456222 LDHDQ86WU2 507 aa28.26■■■□□ 2.11
SEC22C-213ENST00000456222 JDP2Q8WYK2 163 aa28.26■■■□□ 2.11
SEC22C-213ENST00000456222 HACL1Q9UJ83 578 aa28.26■■■□□ 2.11
SEC22C-213ENST00000456222 GPC2Q8N158 579 aa28.25■■■□□ 2.11
SEC22C-213ENST00000456222 LARGE2Q8N3Y3 721 aa28.25■■■□□ 2.11
SEC22C-213ENST00000456222 C8orf58Q8NAV2 365 aa28.25■■■□□ 2.11
SEC22C-213ENST00000456222 HYPKQ9NX55 129 aa28.25■■■□□ 2.11
SEC22C-213ENST00000456222 EPHX2P34913 555 aa28.24■■■□□ 2.11
SEC22C-213ENST00000456222 GNAI1P63096 354 aa28.24■■■□□ 2.11
SEC22C-213ENST00000456222 GRIPAP1Q4V328 841 aa28.24■■■□□ 2.11
SEC22C-213ENST00000456222 EAPPQ56P03 285 aaPredicted RBP28.24■■■□□ 2.11
SEC22C-213ENST00000456222 PHAXQ9H814 394 aaKnown RBP28.24■■■□□ 2.11
SEC22C-213ENST00000456222 GJA3Q9Y6H8 435 aa28.24■■■□□ 2.11
SEC22C-213ENST00000456222 AOC3Q16853 763 aa28.23■■■□□ 2.11
SEC22C-213ENST00000456222 IFFO2Q5TF58 517 aa28.23■■■□□ 2.11
SEC22C-213ENST00000456222 FAM89AQ96GI7 184 aa28.23■■■□□ 2.11
SEC22C-213ENST00000456222 PASKQ96RG2 1323 aa28.21■■■□□ 2.11
SEC22C-213ENST00000456222 PPIP5K2O43314 1243 aa28.21■■■□□ 2.11
SEC22C-213ENST00000456222 EIF6P56537 245 aaKnown RBP28.21■■■□□ 2.11
SEC22C-213ENST00000456222 RTL5Q5HYW3 569 aaPredicted RBP28.21■■■□□ 2.11
SEC22C-213ENST00000456222 BBOX1O75936 387 aa28.2■■■□□ 2.1
SEC22C-213ENST00000456222 ITGBL1O95965 494 aaPredicted RBP28.2■■■□□ 2.1
SEC22C-213ENST00000456222 GRAPQ13588 217 aa28.2■■■□□ 2.1
SEC22C-213ENST00000456222 DDX46Q7L014 1031 aaKnown RBP28.2■■■□□ 2.1
SEC22C-213ENST00000456222 SP8Q8IXZ3 490 aa28.2■■■□□ 2.1
SEC22C-213ENST00000456222 GRAPLQ8TC17 118 aaPredicted RBP28.2■■■□□ 2.1
SEC22C-213ENST00000456222 RTFDC1Q9BY42 306 aaPredicted RBP28.2■■■□□ 2.1
SEC22C-213ENST00000456222 LRRC37AA6NMS7 1700 aa28.2■■■□□ 2.1
SEC22C-213ENST00000456222 DUOX1Q9NRD9 1551 aa28.2■■■□□ 2.1
SEC22C-213ENST00000456222 SCNN1DP51172 638 aa28.19■■■□□ 2.1
SEC22C-213ENST00000456222 CALD1Q05682 793 aaKnown RBP28.19■■■□□ 2.1
SEC22C-213ENST00000456222 TSPYL6Q8N831 410 aa28.19■■■□□ 2.1
SEC22C-213ENST00000456222 NIM1KQ8IY84 436 aa28.18■■■□□ 2.1
SEC22C-213ENST00000456222 CREBZFQ9NS37 354 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms