RNA–Protein interactions for RNA: ENST00000456090.2

SMCR2-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 2, humanhuman

TSL 2 BASIC

Gene SMCR2, Length 564 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR2-201ENST00000456090 TAF1P21675 1872 aa16.17■□□□□ 0.18
SMCR2-201ENST00000456090 POTECB2RU33 542 aa16.17■□□□□ 0.18
SMCR2-201ENST00000456090 FKBP4Q02790 459 aaKnown RBP eCLIP16.17■□□□□ 0.18
SMCR2-201ENST00000456090 PARP10Q53GL7 1025 aa16.17■□□□□ 0.18
SMCR2-201ENST00000456090 RTKN2Q8IZC4 609 aa16.17■□□□□ 0.18
SMCR2-201ENST00000456090 XAGE3Q8WTP9 111 aa16.17■□□□□ 0.18
SMCR2-201ENST00000456090 HTRA3P83110 453 aa16.16■□□□□ 0.18
SMCR2-201ENST00000456090 CFAP44Q96MT7 982 aa16.16■□□□□ 0.18
SMCR2-201ENST00000456090 UTP14AQ9BVJ6 771 aaKnown RBP16.16■□□□□ 0.18
SMCR2-201ENST00000456090 DDX21Q9NR30 783 aaKnown RBP eCLIP16.16■□□□□ 0.18
SMCR2-201ENST00000456090 CHPF2Q9P2E5 772 aa16.16■□□□□ 0.18
SMCR2-201ENST00000456090 APAF1O14727 1248 aa16.15■□□□□ 0.18
SMCR2-201ENST00000456090 DDNO94850 711 aaPredicted RBP16.15■□□□□ 0.18
SMCR2-201ENST00000456090 HOXA10P31260 410 aaPredicted RBP16.15■□□□□ 0.18
SMCR2-201ENST00000456090 HDGFL1Q5TGJ6 251 aa16.15■□□□□ 0.18
SMCR2-201ENST00000456090 C3orf67Q6ZVT6 689 aa16.15■□□□□ 0.18
SMCR2-201ENST00000456090 RBM17Q96I25 401 aaKnown RBP16.15■□□□□ 0.18
SMCR2-201ENST00000456090 DDX60Q8IY21 1712 aaKnown RBP16.14■□□□□ 0.17
SMCR2-201ENST00000456090 SNED1Q8TER0 1413 aa16.14■□□□□ 0.17
SMCR2-201ENST00000456090 HOXB7P09629 217 aa16.14■□□□□ 0.17
SMCR2-201ENST00000456090 HSP90AB3PQ58FF7 597 aa16.14■□□□□ 0.17
SMCR2-201ENST00000456090 SYNE4Q8N205 404 aa16.14■□□□□ 0.17
SMCR2-201ENST00000456090 DNAJC5GQ8N7S2 189 aa16.14■□□□□ 0.17
SMCR2-201ENST00000456090 NLRP3Q96P20 1036 aa16.14■□□□□ 0.17
SMCR2-201ENST00000456090 MBIPQ9NS73 344 aa16.14■□□□□ 0.17
SMCR2-201ENST00000456090 IARSP41252 1262 aaKnown RBP16.13■□□□□ 0.17
SMCR2-201ENST00000456090 NLRP10Q86W26 655 aa16.13■□□□□ 0.17
SMCR2-201ENST00000456090 TCERG1O14776 1098 aaKnown RBP16.12■□□□□ 0.17
SMCR2-201ENST00000456090 TCIRG1Q13488 830 aa16.12■□□□□ 0.17
SMCR2-201ENST00000456090 DUSP27Q5VZP5 1158 aa16.12■□□□□ 0.17
SMCR2-201ENST00000456090 CRAMP1Q96RY5 1269 aa16.12■□□□□ 0.17
SMCR2-201ENST00000456090 PSMD1Q99460 953 aa16.12■□□□□ 0.17
SMCR2-201ENST00000456090 DBF4Q9UBU7 674 aaPredicted RBP16.12■□□□□ 0.17
SMCR2-201ENST00000456090 RNF123Q5XPI4 1314 aa16.12■□□□□ 0.17
SMCR2-201ENST00000456090 ZNF541Q9H0D2 1346 aa16.12■□□□□ 0.17
SMCR2-201ENST00000456090 PPEF1O14829 653 aaPredicted RBP16.11■□□□□ 0.17
SMCR2-201ENST00000456090 ZNF853P0CG23 659 aa16.11■□□□□ 0.17
SMCR2-201ENST00000456090 ZEB1P37275 1124 aaPredicted RBP16.11■□□□□ 0.17
SMCR2-201ENST00000456090 SLC10A5Q5PT55 438 aa16.11■□□□□ 0.17
SMCR2-201ENST00000456090 CC2D2BQ6DHV5 1058 aa16.11■□□□□ 0.17
SMCR2-201ENST00000456090 SLC51AQ86UW1 340 aa16.11■□□□□ 0.17
SMCR2-201ENST00000456090 IFT57Q9NWB7 429 aa16.11■□□□□ 0.17
SMCR2-201ENST00000456090 IQCA1LA6NCM1 817 aa16.1■□□□□ 0.17
SMCR2-201ENST00000456090 HCLS1P14317 486 aaPredicted RBP16.1■□□□□ 0.17
SMCR2-201ENST00000456090 CALD1Q05682 793 aaKnown RBP16.1■□□□□ 0.17
SMCR2-201ENST00000456090 ZNF428Q96B54 188 aa16.1■□□□□ 0.17
SMCR2-201ENST00000456090 L3MBTL3Q96JM7 780 aaPredicted RBP16.1■□□□□ 0.17
SMCR2-201ENST00000456090 TRMT112Q9UI30 125 aaKnown RBP16.1■□□□□ 0.17
SMCR2-201ENST00000456090 COL4A5P29400 1685 aa16.1■□□□□ 0.17
SMCR2-201ENST00000456090 FZD9O00144 591 aa16.09■□□□□ 0.17
SMCR2-201ENST00000456090 POTEIP0CG38 1075 aa16.09■□□□□ 0.17
SMCR2-201ENST00000456090 POTEJP0CG39 1038 aa16.09■□□□□ 0.17
SMCR2-201ENST00000456090 GNAI1P63096 354 aa16.09■□□□□ 0.17
SMCR2-201ENST00000456090 GRIPAP1Q4V328 841 aa16.09■□□□□ 0.17
SMCR2-201ENST00000456090 CCDC184Q52MB2 194 aa16.09■□□□□ 0.17
SMCR2-201ENST00000456090 ANKRD13DQ6ZTN6 518 aa16.09■□□□□ 0.17
SMCR2-201ENST00000456090 PLBD2Q8NHP8 589 aa16.09■□□□□ 0.17
SMCR2-201ENST00000456090 JDP2Q8WYK2 163 aa16.09■□□□□ 0.17
SMCR2-201ENST00000456090 KLRG1Q96E93 195 aa16.09■□□□□ 0.17
SMCR2-201ENST00000456090 HYPKQ9NX55 129 aa16.09■□□□□ 0.17
SMCR2-201ENST00000456090 ABCC4O15439 1325 aa16.09■□□□□ 0.17
SMCR2-201ENST00000456090 SH3TC1Q8TE82 1336 aa16.09■□□□□ 0.17
SMCR2-201ENST00000456090 ELL2O00472 640 aaPredicted RBP16.08■□□□□ 0.16
SMCR2-201ENST00000456090 CHADLQ6NUI6 762 aa16.07■□□□□ 0.16
SMCR2-201ENST00000456090 TMX4Q9H1E5 349 aaPredicted RBP16.07■□□□□ 0.16
SMCR2-201ENST00000456090 TAF1DQ9H5J8 278 aaPredicted RBP16.07■□□□□ 0.16
SMCR2-201ENST00000456090 ATP6V0A2Q9Y487 856 aa16.07■□□□□ 0.16
SMCR2-201ENST00000456090 ADAMTSL1Q8N6G6 1762 aa16.06■□□□□ 0.16
SMCR2-201ENST00000456090 ATP5J2-PTCD1G3V325 749 aa16.06■□□□□ 0.16
SMCR2-201ENST00000456090 GPC2Q8N158 579 aa16.06■□□□□ 0.16
SMCR2-201ENST00000456090 LARGE2Q8N3Y3 721 aa16.06■□□□□ 0.16
SMCR2-201ENST00000456090 LRRC37AA6NMS7 1700 aa16.05■□□□□ 0.16
SMCR2-201ENST00000456090 DDX46Q7L014 1031 aaKnown RBP16.05■□□□□ 0.16
SMCR2-201ENST00000456090 ISCA1Q9BUE6 129 aa16.05■□□□□ 0.16
SMCR2-201ENST00000456090 HACL1Q9UJ83 578 aa16.05■□□□□ 0.16
SMCR2-201ENST00000456090 LTBP1Q14766 1721 aa16.05■□□□□ 0.16
SMCR2-201ENST00000456090 CACNA1FO60840 1977 aa16.04■□□□□ 0.16
SMCR2-201ENST00000456090 BBOX1O75936 387 aa16.04■□□□□ 0.16
SMCR2-201ENST00000456090 EIF6P56537 245 aaKnown RBP16.04■□□□□ 0.16
SMCR2-201ENST00000456090 EAPPQ56P03 285 aaPredicted RBP16.04■□□□□ 0.16
SMCR2-201ENST00000456090 LDHDQ86WU2 507 aa16.04■□□□□ 0.16
SMCR2-201ENST00000456090 C8orf58Q8NAV2 365 aa16.04■□□□□ 0.16
SMCR2-201ENST00000456090 FAM89AQ96GI7 184 aa16.04■□□□□ 0.16
SMCR2-201ENST00000456090 PHAXQ9H814 394 aaKnown RBP16.04■□□□□ 0.16
SMCR2-201ENST00000456090 GJA3Q9Y6H8 435 aa16.04■□□□□ 0.16
SMCR2-201ENST00000456090 ZNF316A6NFI3 1004 aaPredicted RBP16.03■□□□□ 0.16
SMCR2-201ENST00000456090 PPIP5K2O43314 1243 aa16.03■□□□□ 0.16
SMCR2-201ENST00000456090 EPHX2P34913 555 aa16.03■□□□□ 0.16
SMCR2-201ENST00000456090 GOLGA2Q08379 1002 aa16.03■□□□□ 0.16
SMCR2-201ENST00000456090 GRAPQ13588 217 aa16.03■□□□□ 0.16
SMCR2-201ENST00000456090 AOC3Q16853 763 aa16.03■□□□□ 0.16
SMCR2-201ENST00000456090 RTL5Q5HYW3 569 aaPredicted RBP16.03■□□□□ 0.16
SMCR2-201ENST00000456090 RIC3Q7Z5B4 369 aa16.03■□□□□ 0.16
SMCR2-201ENST00000456090 SP8Q8IXZ3 490 aa16.03■□□□□ 0.16
SMCR2-201ENST00000456090 JMYQ8N9B5 988 aa16.03■□□□□ 0.16
SMCR2-201ENST00000456090 GRAPLQ8TC17 118 aaPredicted RBP16.03■□□□□ 0.16
SMCR2-201ENST00000456090 MYH3P11055 1940 aa16.03■□□□□ 0.16
SMCR2-201ENST00000456090 DPP8Q6V1X1 898 aaPredicted RBP16.02■□□□□ 0.16
SMCR2-201ENST00000456090 NIM1KQ8IY84 436 aa16.02■□□□□ 0.16
SMCR2-201ENST00000456090 TSR2Q969E8 191 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms