RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 NTSR2O95665 410 aa16.92■□□□□ 0.3
TREX1-203ENST00000456089 AIMP1Q12904 312 aaKnown RBP16.92■□□□□ 0.3
TREX1-203ENST00000456089 CRY2Q49AN0 593 aa16.92■□□□□ 0.3
TREX1-203ENST00000456089 IFFO2Q5TF58 517 aa16.92■□□□□ 0.3
TREX1-203ENST00000456089 GIGYF2Q6Y7W6 1299 aaKnown RBP16.92■□□□□ 0.3
TREX1-203ENST00000456089 SYNE4Q8N205 404 aa16.92■□□□□ 0.3
TREX1-203ENST00000456089 RPGRQ92834 1020 aaKnown RBP16.92■□□□□ 0.3
TREX1-203ENST00000456089 TRIM35Q9UPQ4 493 aa16.92■□□□□ 0.3
TREX1-203ENST00000456089 PCNTO95613 3336 aa16.92■□□□□ 0.3
TREX1-203ENST00000456089 ERBB4Q15303 1308 aa16.92■□□□□ 0.3
TREX1-203ENST00000456089 SNED1Q8TER0 1413 aa16.91■□□□□ 0.3
TREX1-203ENST00000456089 LMOD3Q0VAK6 560 aa16.91■□□□□ 0.3
TREX1-203ENST00000456089 ADAMTS8Q9UP79 889 aa16.91■□□□□ 0.3
TREX1-203ENST00000456089 IBTKQ9P2D0 1353 aaPredicted RBP16.9■□□□□ 0.3
TREX1-203ENST00000456089 ANP32CO43423 234 aa16.9■□□□□ 0.3
TREX1-203ENST00000456089 IARSP41252 1262 aaKnown RBP16.9■□□□□ 0.3
TREX1-203ENST00000456089 RTKN2Q8IZC4 609 aa16.9■□□□□ 0.3
TREX1-203ENST00000456089 XAGE3Q8WTP9 111 aa16.9■□□□□ 0.3
TREX1-203ENST00000456089 RUNDC1Q96C34 613 aa16.9■□□□□ 0.3
TREX1-203ENST00000456089 RIC1Q4ADV7 1423 aa16.89■□□□□ 0.29
TREX1-203ENST00000456089 COPS6Q7L5N1 327 aa16.89■□□□□ 0.29
TREX1-203ENST00000456089 DDX60Q8IY21 1712 aaKnown RBP16.88■□□□□ 0.29
TREX1-203ENST00000456089 CHL1O00533 1208 aa16.88■□□□□ 0.29
TREX1-203ENST00000456089 CHADLQ6NUI6 762 aa16.88■□□□□ 0.29
TREX1-203ENST00000456089 PPP1R42Q7Z4L9 355 aa16.88■□□□□ 0.29
TREX1-203ENST00000456089 BABAM1Q9NWV8 329 aa16.88■□□□□ 0.29
TREX1-203ENST00000456089 LTBP1Q14766 1721 aa16.87■□□□□ 0.29
TREX1-203ENST00000456089 PPEF1O14829 653 aaPredicted RBP16.87■□□□□ 0.29
TREX1-203ENST00000456089 HOXA10P31260 410 aaPredicted RBP16.87■□□□□ 0.29
TREX1-203ENST00000456089 EAPPQ56P03 285 aaPredicted RBP16.87■□□□□ 0.29
TREX1-203ENST00000456089 JMYQ8N9B5 988 aa16.87■□□□□ 0.29
TREX1-203ENST00000456089 RBM17Q96I25 401 aaKnown RBP16.87■□□□□ 0.29
TREX1-203ENST00000456089 UTP14AQ9BVJ6 771 aaKnown RBP16.87■□□□□ 0.29
TREX1-203ENST00000456089 TAF1DQ9H5J8 278 aaPredicted RBP16.87■□□□□ 0.29
TREX1-203ENST00000456089 CHPF2Q9P2E5 772 aa16.87■□□□□ 0.29
TREX1-203ENST00000456089 RNF123Q5XPI4 1314 aa16.87■□□□□ 0.29
TREX1-203ENST00000456089 ADAMTSL1Q8N6G6 1762 aa16.87■□□□□ 0.29
TREX1-203ENST00000456089 HCLS1P14317 486 aaPredicted RBP16.86■□□□□ 0.29
TREX1-203ENST00000456089 PARP10Q53GL7 1025 aa16.86■□□□□ 0.29
TREX1-203ENST00000456089 L3MBTL3Q96JM7 780 aaPredicted RBP16.86■□□□□ 0.29
TREX1-203ENST00000456089 FZD9O00144 591 aa16.85■□□□□ 0.29
TREX1-203ENST00000456089 NLRP10Q86W26 655 aa16.85■□□□□ 0.29
TREX1-203ENST00000456089 CRAMP1Q96RY5 1269 aa16.85■□□□□ 0.29
TREX1-203ENST00000456089 PSMD1Q99460 953 aa16.85■□□□□ 0.29
TREX1-203ENST00000456089 IQCA1LA6NCM1 817 aa16.84■□□□□ 0.29
TREX1-203ENST00000456089 HDGFL1Q5TGJ6 251 aa16.84■□□□□ 0.29
TREX1-203ENST00000456089 NLRP3Q96P20 1036 aa16.84■□□□□ 0.29
TREX1-203ENST00000456089 DDX21Q9NR30 783 aaKnown RBP eCLIP16.84■□□□□ 0.29
TREX1-203ENST00000456089 HACL1Q9UJ83 578 aa16.84■□□□□ 0.29
TREX1-203ENST00000456089 GJA3Q9Y6H8 435 aa16.84■□□□□ 0.29
TREX1-203ENST00000456089 ABCC4O15439 1325 aa16.84■□□□□ 0.29
TREX1-203ENST00000456089 EPHX2P34913 555 aa16.83■□□□□ 0.28
TREX1-203ENST00000456089 JDP2Q8WYK2 163 aa16.83■□□□□ 0.28
TREX1-203ENST00000456089 MKRN1Q9UHC7 482 aaKnown RBP16.83■□□□□ 0.28
TREX1-203ENST00000456089 TRMT112Q9UI30 125 aaKnown RBP16.83■□□□□ 0.28
TREX1-203ENST00000456089 CLEC11AQ9Y240 323 aa16.83■□□□□ 0.28
TREX1-203ENST00000456089 COL4A1P02462 1669 aa16.82■□□□□ 0.28
TREX1-203ENST00000456089 TCIRG1Q13488 830 aa16.82■□□□□ 0.28
TREX1-203ENST00000456089 SLC10A5Q5PT55 438 aa16.82■□□□□ 0.28
TREX1-203ENST00000456089 CC2D2BQ6DHV5 1058 aa16.82■□□□□ 0.28
TREX1-203ENST00000456089 LDHDQ86WU2 507 aa16.82■□□□□ 0.28
TREX1-203ENST00000456089 LARGE2Q8N3Y3 721 aa16.82■□□□□ 0.28
TREX1-203ENST00000456089 MBIPQ9NS73 344 aa16.82■□□□□ 0.28
TREX1-203ENST00000456089 ATP5J2-PTCD1G3V325 749 aa16.81■□□□□ 0.28
TREX1-203ENST00000456089 APAF1O14727 1248 aa16.81■□□□□ 0.28
TREX1-203ENST00000456089 AOC3Q16853 763 aa16.81■□□□□ 0.28
TREX1-203ENST00000456089 COL13A1Q5TAT6 717 aaPredicted RBP16.81■□□□□ 0.28
TREX1-203ENST00000456089 DUSP27Q5VZP5 1158 aa16.81■□□□□ 0.28
TREX1-203ENST00000456089 EIF6P56537 245 aaKnown RBP16.8■□□□□ 0.28
TREX1-203ENST00000456089 HSP90AB3PQ58FF7 597 aa16.8■□□□□ 0.28
TREX1-203ENST00000456089 RTL5Q5HYW3 569 aaPredicted RBP16.8■□□□□ 0.28
TREX1-203ENST00000456089 MAP1SQ66K74 1059 aaPredicted RBP16.8■□□□□ 0.28
TREX1-203ENST00000456089 GPC2Q8N158 579 aa16.8■□□□□ 0.28
TREX1-203ENST00000456089 CFAP44Q96MT7 982 aa16.8■□□□□ 0.28
TREX1-203ENST00000456089 MRS2Q9HD23 443 aa16.8■□□□□ 0.28
TREX1-203ENST00000456089 ATP6V0A2Q9Y487 856 aa16.8■□□□□ 0.28
TREX1-203ENST00000456089 PASKQ96RG2 1323 aa16.79■□□□□ 0.28
TREX1-203ENST00000456089 ELL2O00472 640 aaPredicted RBP16.79■□□□□ 0.28
TREX1-203ENST00000456089 PPIP5K2O43314 1243 aa16.79■□□□□ 0.28
TREX1-203ENST00000456089 ITGBL1O95965 494 aaPredicted RBP16.79■□□□□ 0.28
TREX1-203ENST00000456089 HSPA1AP0DMV8 641 aaKnown RBP16.79■□□□□ 0.28
TREX1-203ENST00000456089 HSPA1BP0DMV9 641 aaKnown RBP16.79■□□□□ 0.28
TREX1-203ENST00000456089 CREBZFQ9NS37 354 aa16.79■□□□□ 0.28
TREX1-203ENST00000456089 LRRC37AA6NMS7 1700 aa16.79■□□□□ 0.28
TREX1-203ENST00000456089 SH3TC1Q8TE82 1336 aa16.78■□□□□ 0.28
TREX1-203ENST00000456089 CCDC184Q52MB2 194 aa16.78■□□□□ 0.28
TREX1-203ENST00000456089 ANKRD13DQ6ZTN6 518 aa16.78■□□□□ 0.28
TREX1-203ENST00000456089 NIM1KQ8IY84 436 aa16.78■□□□□ 0.28
TREX1-203ENST00000456089 PLBD2Q8NHP8 589 aa16.78■□□□□ 0.28
TREX1-203ENST00000456089 FAM89AQ96GI7 184 aa16.78■□□□□ 0.28
TREX1-203ENST00000456089 EPS15P42566 896 aa16.77■□□□□ 0.28
TREX1-203ENST00000456089 SCNN1DP51172 638 aa16.77■□□□□ 0.28
TREX1-203ENST00000456089 DDX46Q7L014 1031 aaKnown RBP16.77■□□□□ 0.28
TREX1-203ENST00000456089 DBF4Q9UBU7 674 aaPredicted RBP16.77■□□□□ 0.28
TREX1-203ENST00000456089 TRPM7Q96QT4 1865 aa16.77■□□□□ 0.27
TREX1-203ENST00000456089 DUOX1Q9NRD9 1551 aa16.77■□□□□ 0.27
TREX1-203ENST00000456089 HOXB7P09629 217 aa16.76■□□□□ 0.27
TREX1-203ENST00000456089 ZNF853P0CG23 659 aa16.76■□□□□ 0.27
TREX1-203ENST00000456089 CALD1Q05682 793 aaKnown RBP16.76■□□□□ 0.27
TREX1-203ENST00000456089 FMR1Q06787 632 aaKnown RBP eCLIP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms