RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 DDX21Q9NR30 783 aaKnown RBP eCLIP15.58■□□□□ 0.08
PDGFB-204ENST00000455790 ZNF853P0CG23 659 aa15.57■□□□□ 0.08
PDGFB-204ENST00000455790 VEGFAP15692 232 aaPredicted RBP15.57■□□□□ 0.08
PDGFB-204ENST00000455790 APLP1P51693 650 aa15.57■□□□□ 0.08
PDGFB-204ENST00000455790 HTRA3P83110 453 aa15.57■□□□□ 0.08
PDGFB-204ENST00000455790 FKBP4Q02790 459 aaKnown RBP eCLIP15.57■□□□□ 0.08
PDGFB-204ENST00000455790 PARP10Q53GL7 1025 aa15.57■□□□□ 0.08
PDGFB-204ENST00000455790 RPGRQ92834 1020 aaKnown RBP15.57■□□□□ 0.08
PDGFB-204ENST00000455790 ZNF428Q96B54 188 aa15.57■□□□□ 0.08
PDGFB-204ENST00000455790 DDNO94850 711 aaPredicted RBP15.56■□□□□ 0.08
PDGFB-204ENST00000455790 ALDH1B1P30837 517 aa15.56■□□□□ 0.08
PDGFB-204ENST00000455790 HOXA10P31260 410 aaPredicted RBP15.56■□□□□ 0.08
PDGFB-204ENST00000455790 FSTL1Q12841 308 aa15.56■□□□□ 0.08
PDGFB-204ENST00000455790 DUSP27Q5VZP5 1158 aa15.56■□□□□ 0.08
PDGFB-204ENST00000455790 PPP1R42Q7Z4L9 355 aa15.56■□□□□ 0.08
PDGFB-204ENST00000455790 SYNE4Q8N205 404 aa15.56■□□□□ 0.08
PDGFB-204ENST00000455790 COL4A5P29400 1685 aa15.56■□□□□ 0.08
PDGFB-204ENST00000455790 ZNF541Q9H0D2 1346 aa15.55■□□□□ 0.08
PDGFB-204ENST00000455790 HOXB7P09629 217 aa15.55■□□□□ 0.08
PDGFB-204ENST00000455790 NLRP10Q86W26 655 aa15.55■□□□□ 0.08
PDGFB-204ENST00000455790 UTP14AQ9BVJ6 771 aaKnown RBP15.55■□□□□ 0.08
PDGFB-204ENST00000455790 DPY19L2Q6NUT2 758 aa15.54■□□□□ 0.08
PDGFB-204ENST00000455790 RTKN2Q8IZC4 609 aa15.54■□□□□ 0.08
PDGFB-204ENST00000455790 SMC1BQ8NDV3 1235 aa15.54■□□□□ 0.08
PDGFB-204ENST00000455790 IFT57Q9NWB7 429 aa15.54■□□□□ 0.08
PDGFB-204ENST00000455790 TCERG1O14776 1098 aaKnown RBP15.53■□□□□ 0.08
PDGFB-204ENST00000455790 PPEF1O14829 653 aaPredicted RBP15.53■□□□□ 0.08
PDGFB-204ENST00000455790 HCLS1P14317 486 aaPredicted RBP15.53■□□□□ 0.08
PDGFB-204ENST00000455790 ZEB1P37275 1124 aaPredicted RBP15.53■□□□□ 0.08
PDGFB-204ENST00000455790 TCIRG1Q13488 830 aa15.53■□□□□ 0.08
PDGFB-204ENST00000455790 DNAJC5GQ8N7S2 189 aa15.53■□□□□ 0.08
PDGFB-204ENST00000455790 LAMB2P55268 1798 aa15.53■□□□□ 0.08
PDGFB-204ENST00000455790 POTEIP0CG38 1075 aa15.52■□□□□ 0.08
PDGFB-204ENST00000455790 POTEJP0CG39 1038 aa15.52■□□□□ 0.08
PDGFB-204ENST00000455790 IARSP41252 1262 aaKnown RBP15.52■□□□□ 0.08
PDGFB-204ENST00000455790 HSP90AB3PQ58FF7 597 aa15.52■□□□□ 0.08
PDGFB-204ENST00000455790 SLC10A5Q5PT55 438 aa15.52■□□□□ 0.08
PDGFB-204ENST00000455790 RBM17Q96I25 401 aaKnown RBP15.52■□□□□ 0.08
PDGFB-204ENST00000455790 CRAMP1Q96RY5 1269 aa15.52■□□□□ 0.08
PDGFB-204ENST00000455790 DBF4Q9UBU7 674 aaPredicted RBP15.52■□□□□ 0.08
PDGFB-204ENST00000455790 ABCC4O15439 1325 aa15.51■□□□□ 0.07
PDGFB-204ENST00000455790 RNF123Q5XPI4 1314 aa15.51■□□□□ 0.07
PDGFB-204ENST00000455790 ELL2O00472 640 aaPredicted RBP15.51■□□□□ 0.07
PDGFB-204ENST00000455790 GNAI1P63096 354 aa15.51■□□□□ 0.07
PDGFB-204ENST00000455790 C8orf58Q8NAV2 365 aa15.51■□□□□ 0.07
PDGFB-204ENST00000455790 PLBD2Q8NHP8 589 aa15.51■□□□□ 0.07
PDGFB-204ENST00000455790 NLRP3Q96P20 1036 aa15.51■□□□□ 0.07
PDGFB-204ENST00000455790 PSMD1Q99460 953 aa15.51■□□□□ 0.07
PDGFB-204ENST00000455790 TRMT112Q9UI30 125 aaKnown RBP15.51■□□□□ 0.07
PDGFB-204ENST00000455790 ATP5J2-PTCD1G3V325 749 aa15.5■□□□□ 0.07
PDGFB-204ENST00000455790 L3MBTL3Q96JM7 780 aaPredicted RBP15.5■□□□□ 0.07
PDGFB-204ENST00000455790 SH3TC1Q8TE82 1336 aa15.49■□□□□ 0.07
PDGFB-204ENST00000455790 DDX60Q8IY21 1712 aaKnown RBP15.49■□□□□ 0.07
PDGFB-204ENST00000455790 COL4A1P02462 1669 aa15.49■□□□□ 0.07
PDGFB-204ENST00000455790 ZNF316A6NFI3 1004 aaPredicted RBP15.49■□□□□ 0.07
PDGFB-204ENST00000455790 CALD1Q05682 793 aaKnown RBP15.49■□□□□ 0.07
PDGFB-204ENST00000455790 CC2D2BQ6DHV5 1058 aa15.49■□□□□ 0.07
PDGFB-204ENST00000455790 ANKRD13DQ6ZTN6 518 aa15.49■□□□□ 0.07
PDGFB-204ENST00000455790 ISCA1Q9BUE6 129 aa15.49■□□□□ 0.07
PDGFB-204ENST00000455790 PHAXQ9H814 394 aaKnown RBP15.49■□□□□ 0.07
PDGFB-204ENST00000455790 HYPKQ9NX55 129 aa15.49■□□□□ 0.07
PDGFB-204ENST00000455790 FZD9O00144 591 aa15.48■□□□□ 0.07
PDGFB-204ENST00000455790 TSPYL6Q8N831 410 aa15.48■□□□□ 0.07
PDGFB-204ENST00000455790 TSR2Q969E8 191 aaKnown RBP15.48■□□□□ 0.07
PDGFB-204ENST00000455790 ATP6V0A2Q9Y487 856 aa15.48■□□□□ 0.07
PDGFB-204ENST00000455790 PCNTO95613 3336 aa15.47■□□□□ 0.07
PDGFB-204ENST00000455790 FAM89AQ96GI7 184 aa15.47■□□□□ 0.07
PDGFB-204ENST00000455790 TAF1DQ9H5J8 278 aaPredicted RBP15.47■□□□□ 0.07
PDGFB-204ENST00000455790 MRS2Q9HD23 443 aa15.47■□□□□ 0.07
PDGFB-204ENST00000455790 RTL5Q5HYW3 569 aaPredicted RBP15.46■□□□□ 0.07
PDGFB-204ENST00000455790 KLRG1Q96E93 195 aa15.46■□□□□ 0.07
PDGFB-204ENST00000455790 TAF1P21675 1872 aa15.46■□□□□ 0.06
PDGFB-204ENST00000455790 LTBP1Q14766 1721 aa15.46■□□□□ 0.06
PDGFB-204ENST00000455790 DUOX1Q9NRD9 1551 aa15.45■□□□□ 0.06
PDGFB-204ENST00000455790 SCN4AP35499 1836 aa15.45■□□□□ 0.06
PDGFB-204ENST00000455790 IQCA1LA6NCM1 817 aa15.45■□□□□ 0.06
PDGFB-204ENST00000455790 GOLGA2Q08379 1002 aa15.45■□□□□ 0.06
PDGFB-204ENST00000455790 AOC3Q16853 763 aa15.45■□□□□ 0.06
PDGFB-204ENST00000455790 CHADLQ6NUI6 762 aa15.45■□□□□ 0.06
PDGFB-204ENST00000455790 WWC1Q8IX03 1113 aa15.45■□□□□ 0.06
PDGFB-204ENST00000455790 LARGE2Q8N3Y3 721 aa15.45■□□□□ 0.06
PDGFB-204ENST00000455790 JDP2Q8WYK2 163 aa15.45■□□□□ 0.06
PDGFB-204ENST00000455790 ADAMTSL1Q8N6G6 1762 aa15.44■□□□□ 0.06
PDGFB-204ENST00000455790 LRRC37AA6NMS7 1700 aa15.44■□□□□ 0.06
PDGFB-204ENST00000455790 ANP32CO43423 234 aa15.44■□□□□ 0.06
PDGFB-204ENST00000455790 GRAPQ13588 217 aa15.44■□□□□ 0.06
PDGFB-204ENST00000455790 CCDC27Q2M243 656 aa15.44■□□□□ 0.06
PDGFB-204ENST00000455790 DDX46Q7L014 1031 aaKnown RBP15.44■□□□□ 0.06
PDGFB-204ENST00000455790 RIC3Q7Z5B4 369 aa15.44■□□□□ 0.06
PDGFB-204ENST00000455790 GRAPLQ8TC17 118 aaPredicted RBP15.44■□□□□ 0.06
PDGFB-204ENST00000455790 PPIP5K2O43314 1243 aa15.43■□□□□ 0.06
PDGFB-204ENST00000455790 TRIM28Q13263 835 aaKnown RBP15.43■□□□□ 0.06
PDGFB-204ENST00000455790 GRIPAP1Q4V328 841 aa15.43■□□□□ 0.06
PDGFB-204ENST00000455790 LDHDQ86WU2 507 aa15.43■□□□□ 0.06
PDGFB-204ENST00000455790 GPC2Q8N158 579 aa15.43■□□□□ 0.06
PDGFB-204ENST00000455790 MYD88Q99836 296 aa15.43■□□□□ 0.06
PDGFB-204ENST00000455790 HACL1Q9UJ83 578 aa15.43■□□□□ 0.06
PDGFB-204ENST00000455790 GJA3Q9Y6H8 435 aa15.43■□□□□ 0.06
PDGFB-204ENST00000455790 IRS4O14654 1257 aaPredicted RBP15.42■□□□□ 0.06
PDGFB-204ENST00000455790 BBOX1O75936 387 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms