RNA–Protein interactions for RNA: ENST00000454252.1

CHEK2-220, Transcript of checkpoint kinase 2, humanhuman

TSL 3

Gene CHEK2, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-220ENST00000454252 DDX21Q9NR30 783 aaKnown RBP eCLIP9.39□□□□□ -0.91
CHEK2-220ENST00000454252 LTBP1Q14766 1721 aa9.39□□□□□ -0.91
CHEK2-220ENST00000454252 CCDC88AQ3V6T2 1871 aa9.38□□□□□ -0.91
CHEK2-220ENST00000454252 NPC1L1Q9UHC9 1359 aa9.38□□□□□ -0.91
CHEK2-220ENST00000454252 ADAMTSL1Q8N6G6 1762 aa9.38□□□□□ -0.91
CHEK2-220ENST00000454252 AOC2O75106 756 aa9.38□□□□□ -0.91
CHEK2-220ENST00000454252 MYL6BP14649 208 aa9.38□□□□□ -0.91
CHEK2-220ENST00000454252 PPP2R1AP30153 589 aa9.38□□□□□ -0.91
CHEK2-220ENST00000454252 CRY2Q49AN0 593 aa9.38□□□□□ -0.91
CHEK2-220ENST00000454252 SUSD4Q5VX71 490 aa9.38□□□□□ -0.91
CHEK2-220ENST00000454252 CST9Q5W186 159 aa9.38□□□□□ -0.91
CHEK2-220ENST00000454252 GPC2Q8N158 579 aa9.38□□□□□ -0.91
CHEK2-220ENST00000454252 ZBTB3Q9H5J0 574 aa9.38□□□□□ -0.91
CHEK2-220ENST00000454252 RRP7AQ9Y3A4 280 aaKnown RBP9.38□□□□□ -0.91
CHEK2-220ENST00000454252 ALDH1B1P30837 517 aa9.37□□□□□ -0.91
CHEK2-220ENST00000454252 DLK2Q6UY11 383 aa9.37□□□□□ -0.91
CHEK2-220ENST00000454252 PNMA8AQ86V59 439 aaPredicted RBP9.37□□□□□ -0.91
CHEK2-220ENST00000454252 LARGE2Q8N3Y3 721 aa9.37□□□□□ -0.91
CHEK2-220ENST00000454252 JDP2Q8WYK2 163 aa9.37□□□□□ -0.91
CHEK2-220ENST00000454252 CAPNS2Q96L46 248 aa9.37□□□□□ -0.91
CHEK2-220ENST00000454252 CFAP53Q96M91 514 aa9.37□□□□□ -0.91
CHEK2-220ENST00000454252 PSMD1Q99460 953 aa9.37□□□□□ -0.91
CHEK2-220ENST00000454252 VIRMAQ69YN4 1812 aaKnown RBP9.37□□□□□ -0.91
CHEK2-220ENST00000454252 SHTN1A0MZ66 631 aa9.36□□□□□ -0.91
CHEK2-220ENST00000454252 PPEF1O14829 653 aaPredicted RBP9.36□□□□□ -0.91
CHEK2-220ENST00000454252 EIF6P56537 245 aaKnown RBP9.36□□□□□ -0.91
CHEK2-220ENST00000454252 TAF7Q15545 349 aaPredicted RBP9.36□□□□□ -0.91
CHEK2-220ENST00000454252 AOC3Q16853 763 aa9.36□□□□□ -0.91
CHEK2-220ENST00000454252 RPGRQ92834 1020 aaKnown RBP9.36□□□□□ -0.91
CHEK2-220ENST00000454252 CACNA1SQ13698 1873 aa9.36□□□□□ -0.91
CHEK2-220ENST00000454252 MAP3K15Q6ZN16 1313 aa9.35□□□□□ -0.91
CHEK2-220ENST00000454252 CCDC85CA6NKD9 419 aa9.35□□□□□ -0.91
CHEK2-220ENST00000454252 NTSR2O95665 410 aa9.35□□□□□ -0.91
CHEK2-220ENST00000454252 ANXA1P04083 346 aa9.35□□□□□ -0.91
CHEK2-220ENST00000454252 LMOD1P29536 600 aaPredicted RBP9.35□□□□□ -0.91
CHEK2-220ENST00000454252 EIF4A1P60842 406 aaKnown RBP9.35□□□□□ -0.91
CHEK2-220ENST00000454252 PROSER3Q2NL68 480 aa9.35□□□□□ -0.91
CHEK2-220ENST00000454252 GPR101Q96P66 508 aaPredicted RBP9.35□□□□□ -0.91
CHEK2-220ENST00000454252 GLIS2Q9BZE0 524 aaPredicted RBP9.35□□□□□ -0.91
CHEK2-220ENST00000454252 NUDCQ9Y266 331 aa9.35□□□□□ -0.91
CHEK2-220ENST00000454252 DICER1Q9UPY3 1922 aaKnown RBP9.35□□□□□ -0.91
CHEK2-220ENST00000454252 ARFGEF2Q9Y6D5 1785 aa9.35□□□□□ -0.91
CHEK2-220ENST00000454252 PPIP5K2O43314 1243 aa9.34□□□□□ -0.91
CHEK2-220ENST00000454252 HOXA10P31260 410 aaPredicted RBP9.34□□□□□ -0.91
CHEK2-220ENST00000454252 GMPSP49915 693 aaPredicted RBP9.34□□□□□ -0.91
CHEK2-220ENST00000454252 MAP2K1Q02750 393 aaPredicted RBP9.34□□□□□ -0.91
CHEK2-220ENST00000454252 MAPK8IP2Q13387 824 aaPredicted RBP9.34□□□□□ -0.91
CHEK2-220ENST00000454252 KIF6Q6ZMV9 814 aa9.34□□□□□ -0.91
CHEK2-220ENST00000454252 NIM1KQ8IY84 436 aa9.34□□□□□ -0.91
CHEK2-220ENST00000454252 ZNF34Q8IZ26 560 aa9.34□□□□□ -0.91
CHEK2-220ENST00000454252 ZIC5Q96T25 663 aa9.34□□□□□ -0.91
CHEK2-220ENST00000454252 NYXQ9GZU5 481 aa9.34□□□□□ -0.91
CHEK2-220ENST00000454252 RIC1Q4ADV7 1423 aa9.33□□□□□ -0.92
CHEK2-220ENST00000454252 ERVV-1B6SEH8 477 aa9.33□□□□□ -0.92
CHEK2-220ENST00000454252 RGL2O15211 777 aa9.33□□□□□ -0.92
CHEK2-220ENST00000454252 CELF2O95319 508 aaKnown RBP9.33□□□□□ -0.92
CHEK2-220ENST00000454252 HIRAP54198 1017 aaPredicted RBP9.33□□□□□ -0.92
CHEK2-220ENST00000454252 CXCL9Q07325 125 aa9.33□□□□□ -0.92
CHEK2-220ENST00000454252 TRPM4Q8TD43 1214 aa9.33□□□□□ -0.92
CHEK2-220ENST00000454252 RBM17Q96I25 401 aaKnown RBP9.33□□□□□ -0.92
CHEK2-220ENST00000454252 ZNF408Q9H9D4 720 aa9.33□□□□□ -0.92
CHEK2-220ENST00000454252 GPRC5DQ9NZD1 345 aa9.33□□□□□ -0.92
CHEK2-220ENST00000454252 TLL2Q9Y6L7 1015 aa9.33□□□□□ -0.92
CHEK2-220ENST00000454252 SCN4AP35499 1836 aa9.33□□□□□ -0.92
CHEK2-220ENST00000454252 ABCC4O15439 1325 aa9.32□□□□□ -0.92
CHEK2-220ENST00000454252 HTATSF1O43719 755 aaKnown RBP9.32□□□□□ -0.92
CHEK2-220ENST00000454252 RAD17O75943 681 aa9.32□□□□□ -0.92
CHEK2-220ENST00000454252 HCLS1P14317 486 aaPredicted RBP9.32□□□□□ -0.92
CHEK2-220ENST00000454252 PDIA6Q15084 440 aa9.32□□□□□ -0.92
CHEK2-220ENST00000454252 USP50Q70EL3 339 aaPredicted RBP9.32□□□□□ -0.92
CHEK2-220ENST00000454252 LRP10Q7Z4F1 713 aa9.32□□□□□ -0.92
CHEK2-220ENST00000454252 NECTIN2Q92692 538 aa9.32□□□□□ -0.92
CHEK2-220ENST00000454252 CRAMP1Q96RY5 1269 aa9.32□□□□□ -0.92
CHEK2-220ENST00000454252 PLEKHF1Q96S99 279 aa9.32□□□□□ -0.92
CHEK2-220ENST00000454252 YDJCA8MPS7 323 aa9.31□□□□□ -0.92
CHEK2-220ENST00000454252 SLC34A2O95436 690 aa9.31□□□□□ -0.92
CHEK2-220ENST00000454252 EIF2S2P20042 333 aaKnown RBP9.31□□□□□ -0.92
CHEK2-220ENST00000454252 CC2D2BQ6DHV5 1058 aa9.31□□□□□ -0.92
CHEK2-220ENST00000454252 SAPCD2Q86UD0 394 aa9.31□□□□□ -0.92
CHEK2-220ENST00000454252 CFAP44Q96MT7 982 aa9.31□□□□□ -0.92
CHEK2-220ENST00000454252 ADARB2Q9NS39 739 aaKnown RBP9.31□□□□□ -0.92
CHEK2-220ENST00000454252 ATP6V0A2Q9Y487 856 aa9.31□□□□□ -0.92
CHEK2-220ENST00000454252 IBTKQ9P2D0 1353 aaPredicted RBP9.3□□□□□ -0.92
CHEK2-220ENST00000454252 ZNF316A6NFI3 1004 aaPredicted RBP9.3□□□□□ -0.92
CHEK2-220ENST00000454252 EGFRP00533 1210 aa9.3□□□□□ -0.92
CHEK2-220ENST00000454252 ECE1P42892 770 aa9.3□□□□□ -0.92
CHEK2-220ENST00000454252 NFE2L2Q16236 605 aa9.3□□□□□ -0.92
CHEK2-220ENST00000454252 KRT24Q2M2I5 525 aa9.3□□□□□ -0.92
CHEK2-220ENST00000454252 CIAPIN1Q6FI81 312 aa9.3□□□□□ -0.92
CHEK2-220ENST00000454252 GIGYF2Q6Y7W6 1299 aaKnown RBP9.3□□□□□ -0.92
CHEK2-220ENST00000454252 BEGAINQ9BUH8 593 aa9.3□□□□□ -0.92
CHEK2-220ENST00000454252 MCOLN1Q9GZU1 580 aa9.3□□□□□ -0.92
CHEK2-220ENST00000454252 ZNRF3Q9ULT6 936 aa9.3□□□□□ -0.92
CHEK2-220ENST00000454252 ZBTB12Q9Y330 459 aaPredicted RBP9.3□□□□□ -0.92
CHEK2-220ENST00000454252 THSD7BQ9C0I4 1608 aa9.3□□□□□ -0.92
CHEK2-220ENST00000454252 AIMP1Q12904 312 aaKnown RBP9.29□□□□□ -0.92
CHEK2-220ENST00000454252 DPP8Q6V1X1 898 aaPredicted RBP9.29□□□□□ -0.92
CHEK2-220ENST00000454252 NLRP3Q96P20 1036 aa9.29□□□□□ -0.92
CHEK2-220ENST00000454252 UTP14AQ9BVJ6 771 aaKnown RBP9.29□□□□□ -0.92
CHEK2-220ENST00000454252 RTFDC1Q9BY42 306 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms