RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 TSPYL4Q9UJ04 414 aa31.26■■■□□ 2.59
LYSMD2-202ENST00000454181 ERBB4Q15303 1308 aa31.25■■■□□ 2.59
LYSMD2-202ENST00000454181 TMEM88BA6NKF7 163 aa31.25■■■□□ 2.59
LYSMD2-202ENST00000454181 SUSD4Q5VX71 490 aa31.25■■■□□ 2.59
LYSMD2-202ENST00000454181 TMX4Q9H1E5 349 aaPredicted RBP31.25■■■□□ 2.59
LYSMD2-202ENST00000454181 RNF123Q5XPI4 1314 aa31.24■■■□□ 2.59
LYSMD2-202ENST00000454181 HOXA10P31260 410 aaPredicted RBP31.24■■■□□ 2.59
LYSMD2-202ENST00000454181 PPP1R42Q7Z4L9 355 aa31.24■■■□□ 2.59
LYSMD2-202ENST00000454181 IBTKQ9P2D0 1353 aaPredicted RBP31.24■■■□□ 2.59
LYSMD2-202ENST00000454181 KDM3BQ7LBC6 1761 aa31.23■■■□□ 2.59
LYSMD2-202ENST00000454181 CNTNAP1P78357 1384 aa31.23■■■□□ 2.59
LYSMD2-202ENST00000454181 GJA3Q9Y6H8 435 aa31.23■■■□□ 2.59
LYSMD2-202ENST00000454181 DLG5Q8TDM6 1919 aa31.23■■■□□ 2.59
LYSMD2-202ENST00000454181 UBN2Q6ZU65 1347 aa31.23■■■□□ 2.59
LYSMD2-202ENST00000454181 ITGBL1O95965 494 aaPredicted RBP31.22■■■□□ 2.59
LYSMD2-202ENST00000454181 GIGYF2Q6Y7W6 1299 aaKnown RBP31.22■■■□□ 2.59
LYSMD2-202ENST00000454181 ZNF34Q8IZ26 560 aa31.22■■■□□ 2.59
LYSMD2-202ENST00000454181 TCERG1O14776 1098 aaKnown RBP31.21■■■□□ 2.59
LYSMD2-202ENST00000454181 EIF2S2P20042 333 aaKnown RBP31.21■■■□□ 2.59
LYSMD2-202ENST00000454181 LMOD1P29536 600 aaPredicted RBP31.21■■■□□ 2.59
LYSMD2-202ENST00000454181 PARP10Q53GL7 1025 aa31.21■■■□□ 2.59
LYSMD2-202ENST00000454181 LARGE2Q8N3Y3 721 aa31.21■■■□□ 2.59
LYSMD2-202ENST00000454181 CRAMP1Q96RY5 1269 aa31.21■■■□□ 2.59
LYSMD2-202ENST00000454181 CNTROBQ8N137 903 aa31.2■■■□□ 2.59
LYSMD2-202ENST00000454181 NLRP3Q96P20 1036 aa31.2■■■□□ 2.59
LYSMD2-202ENST00000454181 NUP98P52948 1817 aa31.19■■■□□ 2.58
LYSMD2-202ENST00000454181 PPEF1O14829 653 aaPredicted RBP31.19■■■□□ 2.58
LYSMD2-202ENST00000454181 RIPK4P57078 832 aa31.19■■■□□ 2.58
LYSMD2-202ENST00000454181 AIDAQ96BJ3 306 aa31.19■■■□□ 2.58
LYSMD2-202ENST00000454181 RIC1Q4ADV7 1423 aa31.18■■■□□ 2.58
LYSMD2-202ENST00000454181 NTSR2O95665 410 aa31.18■■■□□ 2.58
LYSMD2-202ENST00000454181 MAP1SQ66K74 1059 aaPredicted RBP31.18■■■□□ 2.58
LYSMD2-202ENST00000454181 LMOD3Q0VAK6 560 aa31.16■■■□□ 2.58
LYSMD2-202ENST00000454181 UTP14AQ9BVJ6 771 aaKnown RBP31.16■■■□□ 2.58
LYSMD2-202ENST00000454181 VEGFBP49765 207 aa31.15■■■□□ 2.58
LYSMD2-202ENST00000454181 NIM1KQ8IY84 436 aa31.15■■■□□ 2.58
LYSMD2-202ENST00000454181 BABAM1Q9NWV8 329 aa31.15■■■□□ 2.58
LYSMD2-202ENST00000454181 SNED1Q8TER0 1413 aa31.14■■■□□ 2.58
LYSMD2-202ENST00000454181 RALBP1Q15311 655 aa31.12■■■□□ 2.57
LYSMD2-202ENST00000454181 FOXN1O15353 648 aa31.11■■■□□ 2.57
LYSMD2-202ENST00000454181 PPIP5K2O43314 1243 aa31.11■■■□□ 2.57
LYSMD2-202ENST00000454181 DEFB115Q30KQ5 88 aa31.11■■■□□ 2.57
LYSMD2-202ENST00000454181 HSP90AB3PQ58FF7 597 aa31.11■■■□□ 2.57
LYSMD2-202ENST00000454181 C3orf67Q6ZVT6 689 aa31.11■■■□□ 2.57
LYSMD2-202ENST00000454181 ABT1Q9ULW3 272 aaKnown RBP31.11■■■□□ 2.57
LYSMD2-202ENST00000454181 CTCFP49711 727 aaPredicted RBP31.1■■■□□ 2.57
LYSMD2-202ENST00000454181 PDIA6Q15084 440 aa31.1■■■□□ 2.57
LYSMD2-202ENST00000454181 SLC10A5Q5PT55 438 aa31.1■■■□□ 2.57
LYSMD2-202ENST00000454181 ATP6V0A2Q9Y487 856 aa31.1■■■□□ 2.57
LYSMD2-202ENST00000454181 ANXA1P04083 346 aa31.09■■■□□ 2.57
LYSMD2-202ENST00000454181 TMPOP42166 694 aaKnown RBP31.09■■■□□ 2.57
LYSMD2-202ENST00000454181 AIMP1Q12904 312 aaKnown RBP31.09■■■□□ 2.57
LYSMD2-202ENST00000454181 SUPT20HQ8NEM7 779 aa31.09■■■□□ 2.57
LYSMD2-202ENST00000454181 NECTIN2Q92692 538 aa31.09■■■□□ 2.57
LYSMD2-202ENST00000454181 PROSER3Q2NL68 480 aa31.08■■■□□ 2.57
LYSMD2-202ENST00000454181 COPS6Q7L5N1 327 aa31.08■■■□□ 2.57
LYSMD2-202ENST00000454181 VPS33BQ9H267 617 aa31.08■■■□□ 2.57
LYSMD2-202ENST00000454181 PRDM10Q9NQV6 1147 aa31.08■■■□□ 2.57
LYSMD2-202ENST00000454181 RASSF10A6NK89 507 aa31.07■■■□□ 2.56
LYSMD2-202ENST00000454181 EPS15P42566 896 aa31.07■■■□□ 2.56
LYSMD2-202ENST00000454181 LRP10Q7Z4F1 713 aa31.07■■■□□ 2.56
LYSMD2-202ENST00000454181 BBOX1O75936 387 aa31.06■■■□□ 2.56
LYSMD2-202ENST00000454181 SCNN1DP51172 638 aa31.06■■■□□ 2.56
LYSMD2-202ENST00000454181 AOC3Q16853 763 aa31.06■■■□□ 2.56
LYSMD2-202ENST00000454181 USP50Q70EL3 339 aaPredicted RBP31.06■■■□□ 2.56
LYSMD2-202ENST00000454181 DDX21Q9NR30 783 aaKnown RBP eCLIP31.06■■■□□ 2.56
LYSMD2-202ENST00000454181 ADAMTSL1Q8N6G6 1762 aa31.06■■■□□ 2.56
LYSMD2-202ENST00000454181 NEUROD2Q15784 382 aa31.05■■■□□ 2.56
LYSMD2-202ENST00000454181 XAGE3Q8WTP9 111 aa31.05■■■□□ 2.56
LYSMD2-202ENST00000454181 COL4A5P29400 1685 aa31.05■■■□□ 2.56
LYSMD2-202ENST00000454181 ABCC4O15439 1325 aa31.04■■■□□ 2.56
LYSMD2-202ENST00000454181 DPP8Q6V1X1 898 aaPredicted RBP31.04■■■□□ 2.56
LYSMD2-202ENST00000454181 SLC51AQ86UW1 340 aa31.04■■■□□ 2.56
LYSMD2-202ENST00000454181 TRMT112Q9UI30 125 aaKnown RBP31.04■■■□□ 2.56
LYSMD2-202ENST00000454181 DDX46Q7L014 1031 aaKnown RBP31.03■■■□□ 2.56
LYSMD2-202ENST00000454181 NLRP10Q86W26 655 aa31.03■■■□□ 2.56
LYSMD2-202ENST00000454181 WBP1LQ9NX94 342 aa31.03■■■□□ 2.56
LYSMD2-202ENST00000454181 ZNRF3Q9ULT6 936 aa31.03■■■□□ 2.56
LYSMD2-202ENST00000454181 LAS1LQ9Y4W2 734 aaKnown RBP31.03■■■□□ 2.56
LYSMD2-202ENST00000454181 HCLS1P14317 486 aaPredicted RBP31.02■■■□□ 2.56
LYSMD2-202ENST00000454181 PAXIP1Q6ZW49 1069 aaPredicted RBP31.02■■■□□ 2.56
LYSMD2-202ENST00000454181 SP8Q8IXZ3 490 aa31.02■■■□□ 2.56
LYSMD2-202ENST00000454181 MPNDQ8N594 471 aa31.02■■■□□ 2.56
LYSMD2-202ENST00000454181 WDR33Q9C0J8 1336 aaKnown RBP31.01■■■□□ 2.56
LYSMD2-202ENST00000454181 MAP2K1Q02750 393 aaPredicted RBP31.01■■■□□ 2.55
LYSMD2-202ENST00000454181 TCIRG1Q13488 830 aa31.01■■■□□ 2.55
LYSMD2-202ENST00000454181 CCDC146Q8IYE0 955 aa31■■■□□ 2.55
LYSMD2-202ENST00000454181 ADARB2Q9NS39 739 aaKnown RBP31■■■□□ 2.55
LYSMD2-202ENST00000454181 SH3TC1Q8TE82 1336 aa30.99■■■□□ 2.55
LYSMD2-202ENST00000454181 RTFDC1Q9BY42 306 aaPredicted RBP30.99■■■□□ 2.55
LYSMD2-202ENST00000454181 GPRC5DQ9NZD1 345 aa30.99■■■□□ 2.55
LYSMD2-202ENST00000454181 LBX1P52954 281 aa30.98■■■□□ 2.55
LYSMD2-202ENST00000454181 CXCL9Q07325 125 aa30.98■■■□□ 2.55
LYSMD2-202ENST00000454181 CHL1O00533 1208 aa30.97■■■□□ 2.55
LYSMD2-202ENST00000454181 ECE1P42892 770 aa30.97■■■□□ 2.55
LYSMD2-202ENST00000454181 WDR43Q15061 677 aaKnown RBP eCLIP30.97■■■□□ 2.55
LYSMD2-202ENST00000454181 GRAPQ13588 217 aa30.96■■■□□ 2.55
LYSMD2-202ENST00000454181 CIAPIN1Q6FI81 312 aa30.96■■■□□ 2.55
LYSMD2-202ENST00000454181 GRAPLQ8TC17 118 aaPredicted RBP30.96■■■□□ 2.55
LYSMD2-202ENST00000454181 BCL2L13Q9BXK5 485 aa30.96■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms