RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 KIAA0232Q92628 1395 aa16.28■□□□□ 0.2
UBE2D3-210ENST00000453744 RPAP1Q9BWH6 1393 aaPredicted RBP16.28■□□□□ 0.2
UBE2D3-210ENST00000453744 TMC6Q7Z403 805 aa16.28■□□□□ 0.2
UBE2D3-210ENST00000453744 EDC3Q96F86 508 aaKnown RBP16.28■□□□□ 0.2
UBE2D3-210ENST00000453744 CCDC171Q6TFL3 1326 aa16.28■□□□□ 0.2
UBE2D3-210ENST00000453744 ADGRB2O60241 1585 aa16.28■□□□□ 0.2
UBE2D3-210ENST00000453744 EDC4Q6P2E9 1401 aaKnown RBP16.28■□□□□ 0.2
UBE2D3-210ENST00000453744 MYL6BP14649 208 aa16.28■□□□□ 0.2
UBE2D3-210ENST00000453744 KLHDC4Q8TBB5 520 aa16.28■□□□□ 0.2
UBE2D3-210ENST00000453744 ZCCHC11Q5TAX3 1644 aaKnown RBP16.27■□□□□ 0.2
UBE2D3-210ENST00000453744 C1orf141Q5JVX7 400 aa16.27■□□□□ 0.2
UBE2D3-210ENST00000453744 RAB11FIP4Q86YS3 637 aa16.27■□□□□ 0.2
UBE2D3-210ENST00000453744 ERC1Q8IUD2 1116 aa16.27■□□□□ 0.2
UBE2D3-210ENST00000453744 MAP3K2Q9Y2U5 619 aa16.27■□□□□ 0.2
UBE2D3-210ENST00000453744 ZNF330Q9Y3S2 320 aaPredicted RBP16.27■□□□□ 0.2
UBE2D3-210ENST00000453744 COL3A1P02461 1466 aaPredicted RBP16.27■□□□□ 0.2
UBE2D3-210ENST00000453744 HIP1O00291 1037 aa16.27■□□□□ 0.19
UBE2D3-210ENST00000453744 SSH3Q8TE77 659 aa16.27■□□□□ 0.19
UBE2D3-210ENST00000453744 CREBRFQ8IUR6 639 aa16.27■□□□□ 0.19
UBE2D3-210ENST00000453744 ADGRB1O14514 1584 aa16.26■□□□□ 0.19
UBE2D3-210ENST00000453744 BTBD11A6QL63 1104 aa16.26■□□□□ 0.19
UBE2D3-210ENST00000453744 SNW1Q13573 536 aaKnown RBP16.26■□□□□ 0.19
UBE2D3-210ENST00000453744 ZBTB22O15209 634 aa16.26■□□□□ 0.19
UBE2D3-210ENST00000453744 URI1O94763 535 aaPredicted RBP16.26■□□□□ 0.19
UBE2D3-210ENST00000453744 SFPQP23246 707 aaKnown RBP eCLIP16.26■□□□□ 0.193e-6■□□□□ 10.5
UBE2D3-210ENST00000453744 NEXNQ0ZGT2 675 aa16.26■□□□□ 0.19
UBE2D3-210ENST00000453744 ZNF530Q6P9A1 599 aaPredicted RBP16.26■□□□□ 0.19
UBE2D3-210ENST00000453744 TMEM87AQ8NBN3 555 aa16.26■□□□□ 0.19
UBE2D3-210ENST00000453744 UBXN4Q92575 508 aa16.26■□□□□ 0.19
UBE2D3-210ENST00000453744 CPLX1O14810 134 aa16.26■□□□□ 0.19
UBE2D3-210ENST00000453744 ARGLU1Q9NWB6 273 aaPredicted RBP16.26■□□□□ 0.19
UBE2D3-210ENST00000453744 ADGRB3O60242 1522 aa16.25■□□□□ 0.19
UBE2D3-210ENST00000453744 TEX35Q5T0J7 233 aa16.25■□□□□ 0.19
UBE2D3-210ENST00000453744 SYT10Q6XYQ8 523 aa16.25■□□□□ 0.19
UBE2D3-210ENST00000453744 PI4K2BQ8TCG2 481 aa16.25■□□□□ 0.19
UBE2D3-210ENST00000453744 ZFP91Q96JP5 570 aaPredicted RBP16.25■□□□□ 0.19
UBE2D3-210ENST00000453744 ANO10Q9NW15 660 aa16.25■□□□□ 0.19
UBE2D3-210ENST00000453744 KIAA1210Q9ULL0 1709 aa16.25■□□□□ 0.19
UBE2D3-210ENST00000453744 ABCC3O15438 1527 aa16.25■□□□□ 0.19
UBE2D3-210ENST00000453744 SLC27A2O14975 620 aa16.25■□□□□ 0.19
UBE2D3-210ENST00000453744 STX1AQ16623 288 aa16.25■□□□□ 0.19
UBE2D3-210ENST00000453744 ZNF397Q8NF99 534 aaPredicted RBP16.25■□□□□ 0.19
UBE2D3-210ENST00000453744 TTC14Q96N46 770 aa16.25■□□□□ 0.19
UBE2D3-210ENST00000453744 CLSTN2Q9H4D0 955 aa16.25■□□□□ 0.19
UBE2D3-210ENST00000453744 HSP90AA4PQ58FG1 418 aa16.25■□□□□ 0.19
UBE2D3-210ENST00000453744 SYNE3Q6ZMZ3 975 aa16.25■□□□□ 0.19
UBE2D3-210ENST00000453744 CHST3Q7LGC8 479 aa16.25■□□□□ 0.19
UBE2D3-210ENST00000453744 CHMP4AQ9BY43 222 aa16.25■□□□□ 0.19
UBE2D3-210ENST00000453744 POLR3DP05423 398 aaPredicted RBP16.24■□□□□ 0.19
UBE2D3-210ENST00000453744 Q6ZUG5 572 aa16.24■□□□□ 0.19
UBE2D3-210ENST00000453744 SSH2Q76I76 1423 aa16.24■□□□□ 0.19
UBE2D3-210ENST00000453744 FTOQ9C0B1 505 aaKnown RBP eCLIP16.24■□□□□ 0.198e-9■□□□□ 8.1
UBE2D3-210ENST00000453744 SETBP1Q9Y6X0 1596 aa16.24■□□□□ 0.19
UBE2D3-210ENST00000453744 SLU7O95391 586 aaKnown RBP16.24■□□□□ 0.19
UBE2D3-210ENST00000453744 SERPINC1P01008 464 aa16.24■□□□□ 0.19
UBE2D3-210ENST00000453744 FAM69CQ0P6D2 419 aa16.24■□□□□ 0.19
UBE2D3-210ENST00000453744 CCDC129Q6ZRS4 1044 aa16.24■□□□□ 0.19
UBE2D3-210ENST00000453744 NEK1Q96PY6 1258 aa16.24■□□□□ 0.19
UBE2D3-210ENST00000453744 DDX58O95786 925 aaKnown RBP16.23■□□□□ 0.19
UBE2D3-210ENST00000453744 ZNF396Q96N95 335 aaPredicted RBP16.23■□□□□ 0.19
UBE2D3-210ENST00000453744 NOL10Q9BSC4 688 aaKnown RBP16.23■□□□□ 0.19
UBE2D3-210ENST00000453744 MROH2AA6NES4 1674 aa16.23■□□□□ 0.19
UBE2D3-210ENST00000453744 PPRC1Q5VV67 1664 aaKnown RBP16.23■□□□□ 0.19
UBE2D3-210ENST00000453744 CCDC144BQ3MJ40 725 aa16.23■□□□□ 0.19
UBE2D3-210ENST00000453744 CCDC144CPQ8IYA2 1237 aa16.23■□□□□ 0.19
UBE2D3-210ENST00000453744 IL17REQ8NFR9 667 aa16.23■□□□□ 0.19
UBE2D3-210ENST00000453744 ZSWIM6Q9HCJ5 1215 aa16.23■□□□□ 0.19
UBE2D3-210ENST00000453744 DNAI1Q9UI46 699 aa16.23■□□□□ 0.19
UBE2D3-210ENST00000453744 NRXN1Q9ULB1 1477 aa16.23■□□□□ 0.19
UBE2D3-210ENST00000453744 USP27XA6NNY8 438 aa16.22■□□□□ 0.19
UBE2D3-210ENST00000453744 ARHGEF40Q8TER5 1519 aa16.22■□□□□ 0.19
UBE2D3-210ENST00000453744 KCNQ3O43525 872 aa16.22■□□□□ 0.19
UBE2D3-210ENST00000453744 SKIDA1Q1XH10 827 aa16.22■□□□□ 0.19
UBE2D3-210ENST00000453744 DDX46Q7L014 1031 aaKnown RBP16.22■□□□□ 0.19
UBE2D3-210ENST00000453744 A0A0D9SFI3 127 aa16.22■□□□□ 0.19
UBE2D3-210ENST00000453744 ERCC6LQ2NKX8 1250 aa16.22■□□□□ 0.19
UBE2D3-210ENST00000453744 TAF3Q5VWG9 929 aa16.21■□□□□ 0.19
UBE2D3-210ENST00000453744 TTLL5Q6EMB2 1281 aa16.21■□□□□ 0.19
UBE2D3-210ENST00000453744 TMCO3Q6UWJ1 677 aa16.21■□□□□ 0.19
UBE2D3-210ENST00000453744 LMOD1P29536 600 aaPredicted RBP16.21■□□□□ 0.19
UBE2D3-210ENST00000453744 CFAP100Q494V2 611 aa16.21■□□□□ 0.19
UBE2D3-210ENST00000453744 ARHGAP29Q52LW3 1261 aa16.21■□□□□ 0.19
UBE2D3-210ENST00000453744 C11orf57Q6ZUT1 292 aaPredicted RBP16.21■□□□□ 0.19
UBE2D3-210ENST00000453744 RBM33Q96EV2 1170 aaKnown RBP16.21■□□□□ 0.19
UBE2D3-210ENST00000453744 ZSWIM4Q9H7M6 989 aa16.21■□□□□ 0.19
UBE2D3-210ENST00000453744 A0A1B0GVL5 298 aa16.2■□□□□ 0.18
UBE2D3-210ENST00000453744 LRRC8AQ8IWT6 810 aa16.2■□□□□ 0.18
UBE2D3-210ENST00000453744 TIGD1Q96MW7 591 aa16.2■□□□□ 0.18
UBE2D3-210ENST00000453744 LGR6Q9HBX8 967 aa16.2■□□□□ 0.18
UBE2D3-210ENST00000453744 IFNKQ9P0W0 207 aa16.2■□□□□ 0.18
UBE2D3-210ENST00000453744 TTC41PQ6P2S7 1318 aa16.2■□□□□ 0.18
UBE2D3-210ENST00000453744 PLCD3Q8N3E9 789 aa16.2■□□□□ 0.18
UBE2D3-210ENST00000453744 NCOA5Q9HCD5 579 aaKnown RBP16.2■□□□□ 0.18
UBE2D3-210ENST00000453744 AOX1Q06278 1338 aa16.2■□□□□ 0.18
UBE2D3-210ENST00000453744 RPS6KB1P23443 525 aa16.2■□□□□ 0.18
UBE2D3-210ENST00000453744 WASHC4Q2M389 1173 aa16.2■□□□□ 0.18
UBE2D3-210ENST00000453744 NEMFO60524 1076 aa16.19■□□□□ 0.18
UBE2D3-210ENST00000453744 ATP2B1P20020 1258 aa16.19■□□□□ 0.18
UBE2D3-210ENST00000453744 OTUD7BQ6GQQ9 843 aa16.19■□□□□ 0.18
UBE2D3-210ENST00000453744 ST7Q9NRC1 585 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms