RNA–Protein interactions for RNA: ENST00000453260.6

TNFRSF25-207, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 2

Gene TNFRSF25, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-207ENST00000453260 NLRP3Q96P20 1036 aa24.02■■□□□ 1.44
TNFRSF25-207ENST00000453260 UTP14AQ9BVJ6 771 aaKnown RBP24.02■■□□□ 1.44
TNFRSF25-207ENST00000453260 ADAMTS8Q9UP79 889 aa24.02■■□□□ 1.44
TNFRSF25-207ENST00000453260 NTSR2O95665 410 aa24.01■■□□□ 1.43
TNFRSF25-207ENST00000453260 IARSP41252 1262 aaKnown RBP24.01■■□□□ 1.43
TNFRSF25-207ENST00000453260 IFFO2Q5TF58 517 aa24.01■■□□□ 1.43
TNFRSF25-207ENST00000453260 LRP10Q7Z4F1 713 aa24.01■■□□□ 1.43
TNFRSF25-207ENST00000453260 NECTIN2Q92692 538 aa24.01■■□□□ 1.43
TNFRSF25-207ENST00000453260 CRAMP1Q96RY5 1269 aa24.01■■□□□ 1.43
TNFRSF25-207ENST00000453260 PSMD1Q99460 953 aa24.01■■□□□ 1.43
TNFRSF25-207ENST00000453260 TMX4Q9H1E5 349 aaPredicted RBP24.01■■□□□ 1.43
TNFRSF25-207ENST00000453260 AIMP1Q12904 312 aaKnown RBP24■■□□□ 1.43
TNFRSF25-207ENST00000453260 PROSER3Q2NL68 480 aa24■■□□□ 1.43
TNFRSF25-207ENST00000453260 CHADLQ6NUI6 762 aa24■■□□□ 1.43
TNFRSF25-207ENST00000453260 COPS6Q7L5N1 327 aa24■■□□□ 1.43
TNFRSF25-207ENST00000453260 JDP2Q8WYK2 163 aa24■■□□□ 1.43
TNFRSF25-207ENST00000453260 L3MBTL3Q96JM7 780 aaPredicted RBP24■■□□□ 1.43
TNFRSF25-207ENST00000453260 TRIM35Q9UPQ4 493 aa24■■□□□ 1.43
TNFRSF25-207ENST00000453260 ANXA1P04083 346 aa23.99■■□□□ 1.43
TNFRSF25-207ENST00000453260 JMYQ8N9B5 988 aa23.99■■□□□ 1.43
TNFRSF25-207ENST00000453260 PRKRIP1Q9H875 184 aaPredicted RBP23.99■■□□□ 1.43
TNFRSF25-207ENST00000453260 DDX21Q9NR30 783 aaKnown RBP eCLIP23.99■■□□□ 1.43
TNFRSF25-207ENST00000453260 SCN4AP35499 1836 aa23.98■■□□□ 1.43
TNFRSF25-207ENST00000453260 SLC10A5Q5PT55 438 aa23.98■■□□□ 1.43
TNFRSF25-207ENST00000453260 XAGE3Q8WTP9 111 aa23.98■■□□□ 1.43
TNFRSF25-207ENST00000453260 RNF123Q5XPI4 1314 aa23.98■■□□□ 1.43
TNFRSF25-207ENST00000453260 HOXB7P09629 217 aa23.96■■□□□ 1.43
TNFRSF25-207ENST00000453260 FZD9O00144 591 aa23.95■■□□□ 1.42
TNFRSF25-207ENST00000453260 PPEF1O14829 653 aaPredicted RBP23.95■■□□□ 1.42
TNFRSF25-207ENST00000453260 LDHDQ86WU2 507 aa23.95■■□□□ 1.42
TNFRSF25-207ENST00000453260 CFAP44Q96MT7 982 aa23.95■■□□□ 1.42
TNFRSF25-207ENST00000453260 TAF1DQ9H5J8 278 aaPredicted RBP23.95■■□□□ 1.42
TNFRSF25-207ENST00000453260 HACL1Q9UJ83 578 aa23.95■■□□□ 1.42
TNFRSF25-207ENST00000453260 ZNF541Q9H0D2 1346 aa23.94■■□□□ 1.42
TNFRSF25-207ENST00000453260 EIF6P56537 245 aaKnown RBP23.94■■□□□ 1.42
TNFRSF25-207ENST00000453260 TCIRG1Q13488 830 aa23.94■■□□□ 1.42
TNFRSF25-207ENST00000453260 HDGFL1Q5TGJ6 251 aa23.94■■□□□ 1.42
TNFRSF25-207ENST00000453260 GPC2Q8N158 579 aa23.94■■□□□ 1.42
TNFRSF25-207ENST00000453260 TCERG1O14776 1098 aaKnown RBP23.93■■□□□ 1.42
TNFRSF25-207ENST00000453260 KRT24Q2M2I5 525 aa23.93■■□□□ 1.42
TNFRSF25-207ENST00000453260 NLRP10Q86W26 655 aa23.93■■□□□ 1.42
TNFRSF25-207ENST00000453260 CHPF2Q9P2E5 772 aa23.93■■□□□ 1.42
TNFRSF25-207ENST00000453260 DBF4Q9UBU7 674 aaPredicted RBP23.93■■□□□ 1.42
TNFRSF25-207ENST00000453260 TRMT112Q9UI30 125 aaKnown RBP23.93■■□□□ 1.42
TNFRSF25-207ENST00000453260 PCNTO95613 3336 aa23.93■■□□□ 1.42
TNFRSF25-207ENST00000453260 CALD1Q05682 793 aaKnown RBP23.92■■□□□ 1.42
TNFRSF25-207ENST00000453260 PNMA8AQ86V59 439 aaPredicted RBP23.92■■□□□ 1.42
TNFRSF25-207ENST00000453260 LARGE2Q8N3Y3 721 aa23.92■■□□□ 1.42
TNFRSF25-207ENST00000453260 ANKRD36CQ5JPF3 1778 aa23.91■■□□□ 1.42
TNFRSF25-207ENST00000453260 BBOX1O75936 387 aa23.91■■□□□ 1.42
TNFRSF25-207ENST00000453260 POTEIP0CG38 1075 aa23.91■■□□□ 1.42
TNFRSF25-207ENST00000453260 POTEJP0CG39 1038 aa23.91■■□□□ 1.42
TNFRSF25-207ENST00000453260 EAPPQ56P03 285 aaPredicted RBP23.91■■□□□ 1.42
TNFRSF25-207ENST00000453260 C3orf67Q6ZVT6 689 aa23.91■■□□□ 1.42
TNFRSF25-207ENST00000453260 ATP6V0A2Q9Y487 856 aa23.91■■□□□ 1.42
TNFRSF25-207ENST00000453260 SNED1Q8TER0 1413 aa23.91■■□□□ 1.42
TNFRSF25-207ENST00000453260 EPHX2P34913 555 aa23.9■■□□□ 1.42
TNFRSF25-207ENST00000453260 ANKRD13DQ6ZTN6 518 aa23.9■■□□□ 1.42
TNFRSF25-207ENST00000453260 PLBD2Q8NHP8 589 aa23.9■■□□□ 1.42
TNFRSF25-207ENST00000453260 VPS33BQ9H267 617 aa23.9■■□□□ 1.42
TNFRSF25-207ENST00000453260 CREBZFQ9NS37 354 aa23.9■■□□□ 1.42
TNFRSF25-207ENST00000453260 HYPKQ9NX55 129 aa23.9■■□□□ 1.42
TNFRSF25-207ENST00000453260 CLEC11AQ9Y240 323 aa23.9■■□□□ 1.42
TNFRSF25-207ENST00000453260 SH3TC1Q8TE82 1336 aa23.89■■□□□ 1.42
TNFRSF25-207ENST00000453260 DDX46Q7L014 1031 aaKnown RBP23.89■■□□□ 1.41
TNFRSF25-207ENST00000453260 APAF1O14727 1248 aa23.88■■□□□ 1.41
TNFRSF25-207ENST00000453260 HCLS1P14317 486 aaPredicted RBP23.88■■□□□ 1.41
TNFRSF25-207ENST00000453260 DUSP27Q5VZP5 1158 aa23.88■■□□□ 1.41
TNFRSF25-207ENST00000453260 SUPT20HQ8NEM7 779 aa23.88■■□□□ 1.41
TNFRSF25-207ENST00000453260 GJA3Q9Y6H8 435 aa23.88■■□□□ 1.41
TNFRSF25-207ENST00000453260 ABCC4O15439 1325 aa23.87■■□□□ 1.41
TNFRSF25-207ENST00000453260 LMOD1P29536 600 aaPredicted RBP23.87■■□□□ 1.41
TNFRSF25-207ENST00000453260 GNAI1P63096 354 aa23.87■■□□□ 1.41
TNFRSF25-207ENST00000453260 NIM1KQ8IY84 436 aa23.87■■□□□ 1.41
TNFRSF25-207ENST00000453260 MBIPQ9NS73 344 aa23.87■■□□□ 1.41
TNFRSF25-207ENST00000453260 PPIP5K2O43314 1243 aa23.86■■□□□ 1.41
TNFRSF25-207ENST00000453260 SP8Q8IXZ3 490 aa23.86■■□□□ 1.41
TNFRSF25-207ENST00000453260 CHMP4AQ9BY43 222 aa23.86■■□□□ 1.41
TNFRSF25-207ENST00000453260 IFT57Q9NWB7 429 aa23.86■■□□□ 1.41
TNFRSF25-207ENST00000453260 ZNF853P0CG23 659 aa23.85■■□□□ 1.41
TNFRSF25-207ENST00000453260 DPP8Q6V1X1 898 aaPredicted RBP23.84■■□□□ 1.41
TNFRSF25-207ENST00000453260 TMC4Q7Z404 712 aa23.84■■□□□ 1.41
TNFRSF25-207ENST00000453260 PASKQ96RG2 1323 aa23.84■■□□□ 1.41
TNFRSF25-207ENST00000453260 GRAPQ13588 217 aa23.83■■□□□ 1.41
TNFRSF25-207ENST00000453260 MPNDQ8N594 471 aa23.83■■□□□ 1.41
TNFRSF25-207ENST00000453260 GRAPLQ8TC17 118 aaPredicted RBP23.83■■□□□ 1.41
TNFRSF25-207ENST00000453260 ITGBL1O95965 494 aaPredicted RBP23.82■■□□□ 1.4
TNFRSF25-207ENST00000453260 AOC3Q16853 763 aa23.82■■□□□ 1.4
TNFRSF25-207ENST00000453260 ISCA1Q9BUE6 129 aa23.82■■□□□ 1.4
TNFRSF25-207ENST00000453260 RTFDC1Q9BY42 306 aaPredicted RBP23.82■■□□□ 1.4
TNFRSF25-207ENST00000453260 LAMB2P55268 1798 aa23.82■■□□□ 1.4
TNFRSF25-207ENST00000453260 TMEM88BA6NKF7 163 aa23.81■■□□□ 1.4
TNFRSF25-207ENST00000453260 ATP5J2-PTCD1G3V325 749 aa23.81■■□□□ 1.4
TNFRSF25-207ENST00000453260 RIC3Q7Z5B4 369 aa23.81■■□□□ 1.4
TNFRSF25-207ENST00000453260 CNTROBQ8N137 903 aa23.81■■□□□ 1.4
TNFRSF25-207ENST00000453260 MKRN1Q9UHC7 482 aaKnown RBP23.81■■□□□ 1.4
TNFRSF25-207ENST00000453260 GOLGA2Q08379 1002 aa23.8■■□□□ 1.4
TNFRSF25-207ENST00000453260 TRIM28Q13263 835 aaKnown RBP23.8■■□□□ 1.4
TNFRSF25-207ENST00000453260 FAM89AQ96GI7 184 aa23.8■■□□□ 1.4
TNFRSF25-207ENST00000453260 ZNRF3Q9ULT6 936 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms