RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 C10orf71Q711Q0 1435 aa30.55■■■□□ 2.48
CPSF4-207ENST00000451876 CNBD1Q8NA66 436 aa30.55■■■□□ 2.48
CPSF4-207ENST00000451876 LINS1Q8NG48 757 aa30.55■■■□□ 2.48
CPSF4-207ENST00000451876 NUTM1Q86Y26 1132 aa30.54■■■□□ 2.48
CPSF4-207ENST00000451876 CCDC191Q8NCU4 936 aa30.54■■■□□ 2.48
CPSF4-207ENST00000451876 TNRC6CQ9HCJ0 1690 aaKnown RBP30.54■■■□□ 2.48
CPSF4-207ENST00000451876 DDX60Q8IY21 1712 aaKnown RBP30.53■■■□□ 2.48
CPSF4-207ENST00000451876 PPP1R42Q7Z4L9 355 aa30.53■■■□□ 2.48
CPSF4-207ENST00000451876 ABCC4O15439 1325 aa30.52■■■□□ 2.48
CPSF4-207ENST00000451876 CLUAP1Q96AJ1 413 aa30.52■■■□□ 2.48
CPSF4-207ENST00000451876 CWC25Q9NXE8 425 aaPredicted RBP30.52■■■□□ 2.48
CPSF4-207ENST00000451876 ABCC12Q96J65 1359 aa30.52■■■□□ 2.48
CPSF4-207ENST00000451876 LAMB2P55268 1798 aa30.52■■■□□ 2.48
CPSF4-207ENST00000451876 KIAA1551Q9HCM1 1747 aa30.52■■■□□ 2.48
CPSF4-207ENST00000451876 PLIN1O60240 522 aa30.51■■■□□ 2.48
CPSF4-207ENST00000451876 TPTE2Q6XPS3 522 aa30.51■■■□□ 2.48
CPSF4-207ENST00000451876 UTP14AQ9BVJ6 771 aaKnown RBP30.51■■■□□ 2.48
CPSF4-207ENST00000451876 NPHP1O15259 732 aa30.51■■■□□ 2.47
CPSF4-207ENST00000451876 SYNE4Q8N205 404 aa30.51■■■□□ 2.47
CPSF4-207ENST00000451876 NYXQ9GZU5 481 aa30.51■■■□□ 2.47
CPSF4-207ENST00000451876 TRMT112Q9UI30 125 aaKnown RBP30.51■■■□□ 2.47
CPSF4-207ENST00000451876 ERFEQ4G0M1 354 aa30.5■■■□□ 2.47
CPSF4-207ENST00000451876 SRCIN1Q9C0H9 1055 aa30.5■■■□□ 2.47
CPSF4-207ENST00000451876 GCKRQ14397 625 aa30.49■■■□□ 2.47
CPSF4-207ENST00000451876 RTL5Q5HYW3 569 aaPredicted RBP30.49■■■□□ 2.47
CPSF4-207ENST00000451876 PPP1R1BQ9UD71 204 aaPredicted RBP30.49■■■□□ 2.47
CPSF4-207ENST00000451876 KLHL34Q8N239 644 aa30.48■■■□□ 2.47
CPSF4-207ENST00000451876 FAM89AQ96GI7 184 aa30.48■■■□□ 2.47
CPSF4-207ENST00000451876 COL11A2P13942 1736 aaPredicted RBP30.48■■■□□ 2.47
CPSF4-207ENST00000451876 GTF2E1P29083 439 aaPredicted RBP30.47■■■□□ 2.47
CPSF4-207ENST00000451876 JARID2Q92833 1246 aaPredicted RBP30.47■■■□□ 2.47
CPSF4-207ENST00000451876 GOLGB1Q14789 3259 aaKnown RBP30.47■■■□□ 2.47
CPSF4-207ENST00000451876 SH3TC1Q8TE82 1336 aa30.46■■■□□ 2.47
CPSF4-207ENST00000451876 ALDH1L1O75891 902 aa30.46■■■□□ 2.47
CPSF4-207ENST00000451876 RLBP1P12271 317 aa30.46■■■□□ 2.47
CPSF4-207ENST00000451876 ST5P78524 1137 aa30.46■■■□□ 2.47
CPSF4-207ENST00000451876 FHDC1Q9C0D6 1143 aaPredicted RBP30.46■■■□□ 2.47
CPSF4-207ENST00000451876 RNF123Q5XPI4 1314 aa30.46■■■□□ 2.47
CPSF4-207ENST00000451876 ZBTB38Q8NAP3 1195 aaPredicted RBP30.45■■■□□ 2.47
CPSF4-207ENST00000451876 PCCAP05165 728 aaPredicted RBP30.44■■■□□ 2.46
CPSF4-207ENST00000451876 CCT4P50991 539 aaKnown RBP30.44■■■□□ 2.46
CPSF4-207ENST00000451876 INTS3Q68E01 1043 aaKnown RBP30.44■■■□□ 2.46
CPSF4-207ENST00000451876 DZIP1LQ8IYY4 767 aaKnown RBP30.44■■■□□ 2.46
CPSF4-207ENST00000451876 MYH3P11055 1940 aa30.43■■■□□ 2.46
CPSF4-207ENST00000451876 DLEC1Q9Y238 1755 aa30.43■■■□□ 2.46
CPSF4-207ENST00000451876 UBE3BQ7Z3V4 1068 aa30.43■■■□□ 2.46
CPSF4-207ENST00000451876 FTSJ3Q8IY81 847 aaKnown RBP30.43■■■□□ 2.46
CPSF4-207ENST00000451876 TMEM57Q8N5G2 664 aa30.43■■■□□ 2.46
CPSF4-207ENST00000451876 RIC1Q4ADV7 1423 aa30.43■■■□□ 2.46
CPSF4-207ENST00000451876 CD2APQ9Y5K6 639 aa30.42■■■□□ 2.46
CPSF4-207ENST00000451876 H7C1W4 665 aa30.41■■■□□ 2.46
CPSF4-207ENST00000451876 HCLS1P14317 486 aaPredicted RBP30.41■■■□□ 2.46
CPSF4-207ENST00000451876 PANK1Q8TE04 598 aa30.41■■■□□ 2.46
CPSF4-207ENST00000451876 BRIP1Q9BX63 1249 aa30.41■■■□□ 2.46
CPSF4-207ENST00000451876 GRM8O00222 908 aa30.4■■■□□ 2.46
CPSF4-207ENST00000451876 CASP7P55210 303 aa30.4■■■□□ 2.46
CPSF4-207ENST00000451876 RRP1P56182 461 aaKnown RBP30.4■■■□□ 2.46
CPSF4-207ENST00000451876 C20orf194Q5TEA3 1177 aa30.4■■■□□ 2.46
CPSF4-207ENST00000451876 C3orf67Q6ZVT6 689 aa30.4■■■□□ 2.46
CPSF4-207ENST00000451876 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.4■■■□□ 2.46
CPSF4-207ENST00000451876 BRCA1P38398 1863 aaKnown RBP30.4■■■□□ 2.46
CPSF4-207ENST00000451876 IRS4O14654 1257 aaPredicted RBP30.39■■■□□ 2.46
CPSF4-207ENST00000451876 NBPF7P0C2Y1 421 aaPredicted RBP30.39■■■□□ 2.46
CPSF4-207ENST00000451876 SLC10A5Q5PT55 438 aa30.39■■■□□ 2.46
CPSF4-207ENST00000451876 NLGN2Q8NFZ4 835 aa30.39■■■□□ 2.46
CPSF4-207ENST00000451876 CDHR2Q9BYE9 1310 aa30.38■■■□□ 2.45
CPSF4-207ENST00000451876 USP44Q9H0E7 712 aa30.38■■■□□ 2.45
CPSF4-207ENST00000451876 C9orf78Q9NZ63 289 aaPredicted RBP30.38■■■□□ 2.45
CPSF4-207ENST00000451876 CACNA1SQ13698 1873 aa30.37■■■□□ 2.45
CPSF4-207ENST00000451876 SYT17Q9BSW7 474 aa30.37■■■□□ 2.45
CPSF4-207ENST00000451876 CHRNA5P30532 468 aa30.36■■■□□ 2.45
CPSF4-207ENST00000451876 UTYO14607 1347 aa30.36■■■□□ 2.45
CPSF4-207ENST00000451876 PDE6BP35913 854 aa30.36■■■□□ 2.45
CPSF4-207ENST00000451876 TAF1P21675 1872 aa30.34■■■□□ 2.45
CPSF4-207ENST00000451876 KLRG2A4D1S0 409 aaPredicted RBP30.34■■■□□ 2.45
CPSF4-207ENST00000451876 ITPRIPQ8IWB1 547 aa30.34■■■□□ 2.45
CPSF4-207ENST00000451876 A0A0G2JLW4 131 aa30.33■■■□□ 2.45
CPSF4-207ENST00000451876 DPEP1P16444 411 aa30.33■■■□□ 2.45
CPSF4-207ENST00000451876 TGFB2P61812 414 aa30.33■■■□□ 2.45
CPSF4-207ENST00000451876 MEIS3Q99687 375 aa30.33■■■□□ 2.45
CPSF4-207ENST00000451876 SUPT16HQ9Y5B9 1047 aaKnown RBP30.33■■■□□ 2.45
CPSF4-207ENST00000451876 MS4A1P11836 297 aa30.33■■■□□ 2.45
CPSF4-207ENST00000451876 C2CD5Q86YS7 1000 aa30.33■■■□□ 2.45
CPSF4-207ENST00000451876 NLRP3Q96P20 1036 aa30.33■■■□□ 2.45
CPSF4-207ENST00000451876 PDE3AQ14432 1141 aa30.32■■■□□ 2.44
CPSF4-207ENST00000451876 CRY2Q49AN0 593 aa30.32■■■□□ 2.44
CPSF4-207ENST00000451876 PDE8AO60658 829 aa30.31■■■□□ 2.44
CPSF4-207ENST00000451876 SRGNP10124 158 aa30.31■■■□□ 2.44
CPSF4-207ENST00000451876 KCNA3P22001 575 aa30.31■■■□□ 2.44
CPSF4-207ENST00000451876 COG6Q9Y2V7 657 aa30.31■■■□□ 2.44
CPSF4-207ENST00000451876 KAZALD1Q96I82 304 aa30.3■■■□□ 2.44
CPSF4-207ENST00000451876 SUCLG2Q96I99 432 aa30.3■■■□□ 2.44
CPSF4-207ENST00000451876 COL4A1P02462 1669 aa30.3■■■□□ 2.44
CPSF4-207ENST00000451876 H0YIN7 160 aa30.29■■■□□ 2.44
CPSF4-207ENST00000451876 PLA2G12BQ9BX93 195 aa30.29■■■□□ 2.44
CPSF4-207ENST00000451876 MVPQ14764 893 aaKnown RBP30.29■■■□□ 2.44
CPSF4-207ENST00000451876 EPHA10Q5JZY3 1008 aa30.29■■■□□ 2.44
CPSF4-207ENST00000451876 CTSWP56202 376 aa30.28■■■□□ 2.44
CPSF4-207ENST00000451876 WWC3Q9ULE0 1092 aa30.28■■■□□ 2.44
CPSF4-207ENST00000451876 UBTFL1P0CB47 393 aaPredicted RBP30.27■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms