RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 HIP1O00291 1037 aa14.46□□□□□ -0.09
UBE3B-204ENST00000449510 CHL1O00533 1208 aa14.46□□□□□ -0.09
UBE3B-204ENST00000449510 TTC5Q8N0Z6 440 aa14.46□□□□□ -0.09
UBE3B-204ENST00000449510 NEK11Q8NG66 645 aa14.46□□□□□ -0.09
UBE3B-204ENST00000449510 LEO1Q8WVC0 666 aaPredicted RBP14.46□□□□□ -0.09
UBE3B-204ENST00000449510 ST7Q9NRC1 585 aa14.46□□□□□ -0.09
UBE3B-204ENST00000449510 CD109Q6YHK3 1445 aa14.46□□□□□ -0.1
UBE3B-204ENST00000449510 CYP2E1P05181 493 aaPredicted RBP14.46□□□□□ -0.1
UBE3B-204ENST00000449510 KARSQ15046 597 aaKnown RBP14.46□□□□□ -0.1
UBE3B-204ENST00000449510 ERC1Q8IUD2 1116 aa14.46□□□□□ -0.1
UBE3B-204ENST00000449510 UTP14AQ9BVJ6 771 aaKnown RBP14.46□□□□□ -0.1
UBE3B-204ENST00000449510 NLRP2Q9NX02 1062 aa14.46□□□□□ -0.1
UBE3B-204ENST00000449510 CWC15Q9P013 229 aaKnown RBP14.46□□□□□ -0.1
UBE3B-204ENST00000449510 PRDM4Q9UKN5 801 aa14.46□□□□□ -0.1
UBE3B-204ENST00000449510 TPCN1Q9ULQ1 816 aa14.46□□□□□ -0.1
UBE3B-204ENST00000449510 TPM1P09493 284 aa14.45□□□□□ -0.1
UBE3B-204ENST00000449510 APOBRQ0VD83 1088 aa14.45□□□□□ -0.1
UBE3B-204ENST00000449510 EVI5LQ96CN4 794 aa14.45□□□□□ -0.1
UBE3B-204ENST00000449510 SRRTQ9BXP5 876 aaKnown RBP14.45□□□□□ -0.1
UBE3B-204ENST00000449510 GOLIM4O00461 696 aa14.45□□□□□ -0.1
UBE3B-204ENST00000449510 EID1Q9Y6B2 187 aa14.45□□□□□ -0.1
UBE3B-204ENST00000449510 SOS1Q07889 1333 aaPredicted RBP14.45□□□□□ -0.1
UBE3B-204ENST00000449510 ITSN2Q9NZM3 1697 aa14.45□□□□□ -0.1
UBE3B-204ENST00000449510 NLRP1Q9C000 1473 aa14.45□□□□□ -0.1
UBE3B-204ENST00000449510 PPARDQ03181 441 aa14.45□□□□□ -0.1
UBE3B-204ENST00000449510 TSR1Q2NL82 804 aaKnown RBP14.45□□□□□ -0.1
UBE3B-204ENST00000449510 HSP90AB3PQ58FF7 597 aa14.45□□□□□ -0.1
UBE3B-204ENST00000449510 C8orf76Q96K31 380 aa14.45□□□□□ -0.1
UBE3B-204ENST00000449510 ZNF518AQ6AHZ1 1483 aa14.44□□□□□ -0.1
UBE3B-204ENST00000449510 KIF4BQ2VIQ3 1234 aa14.44□□□□□ -0.1
UBE3B-204ENST00000449510 GPATCH11Q8N954 259 aa14.44□□□□□ -0.1
UBE3B-204ENST00000449510 USP44Q9H0E7 712 aa14.44□□□□□ -0.1
UBE3B-204ENST00000449510 ZMYM3Q14202 1370 aa14.44□□□□□ -0.1
UBE3B-204ENST00000449510 ACEP12821 1306 aa14.44□□□□□ -0.1
UBE3B-204ENST00000449510 RAD50Q92878 1312 aa14.44□□□□□ -0.1
UBE3B-204ENST00000449510 SYNMO15061 1565 aa14.44□□□□□ -0.1
UBE3B-204ENST00000449510 NCBP1Q09161 790 aaKnown RBP14.44□□□□□ -0.1
UBE3B-204ENST00000449510 CUL4AQ13619 759 aa14.44□□□□□ -0.1
UBE3B-204ENST00000449510 CARD6Q9BX69 1037 aa14.44□□□□□ -0.1
UBE3B-204ENST00000449510 RABEP2Q9H5N1 569 aa14.44□□□□□ -0.1
UBE3B-204ENST00000449510 PUF60Q9UHX1 559 aaKnown RBP14.44□□□□□ -0.1
UBE3B-204ENST00000449510 MRVI1Q9Y6F6 885 aa14.44□□□□□ -0.1
UBE3B-204ENST00000449510 SHANK2Q9UPX8 1470 aa14.43□□□□□ -0.1
UBE3B-204ENST00000449510 UBASH3AP57075 661 aa14.43□□□□□ -0.1
UBE3B-204ENST00000449510 GOLGA8FQ08AF8 430 aa14.43□□□□□ -0.1
UBE3B-204ENST00000449510 GOLGA8DPQ0D2H9 430 aa14.43□□□□□ -0.1
UBE3B-204ENST00000449510 IL25Q9H293 177 aa14.43□□□□□ -0.1
UBE3B-204ENST00000449510 RXRAP19793 462 aa14.43□□□□□ -0.1
UBE3B-204ENST00000449510 CAGE1Q8TC20 777 aa14.43□□□□□ -0.1
UBE3B-204ENST00000449510 H0YHG0 523 aa14.43□□□□□ -0.1
UBE3B-204ENST00000449510 CASQ1P31415 396 aa14.43□□□□□ -0.1
UBE3B-204ENST00000449510 AKAP17AQ02040 695 aaKnown RBP14.43□□□□□ -0.1
UBE3B-204ENST00000449510 VPS53Q5VIR6 699 aa14.43□□□□□ -0.1
UBE3B-204ENST00000449510 IPO4Q8TEX9 1081 aaKnown RBP14.43□□□□□ -0.1
UBE3B-204ENST00000449510 CCDC12Q8WUD4 166 aaPredicted RBP14.43□□□□□ -0.1
UBE3B-204ENST00000449510 MYD88Q99836 296 aa14.43□□□□□ -0.1
UBE3B-204ENST00000449510 CCDC171Q6TFL3 1326 aa14.42□□□□□ -0.1
UBE3B-204ENST00000449510 ADAMTS12P58397 1594 aa14.42□□□□□ -0.1
UBE3B-204ENST00000449510 EIF2AK4Q9P2K8 1649 aaKnown RBP14.42□□□□□ -0.1
UBE3B-204ENST00000449510 CCDC191Q8NCU4 936 aa14.42□□□□□ -0.1
UBE3B-204ENST00000449510 DUOX2Q9NRD8 1548 aa14.42□□□□□ -0.1
UBE3B-204ENST00000449510 NAP1L1P55209 391 aaKnown RBP14.42□□□□□ -0.1
UBE3B-204ENST00000449510 EYA1Q99502 592 aa14.42□□□□□ -0.1
UBE3B-204ENST00000449510 KCNF1Q9H3M0 494 aa14.42□□□□□ -0.1
UBE3B-204ENST00000449510 LZTFL1Q9NQ48 299 aa14.42□□□□□ -0.1
UBE3B-204ENST00000449510 RIMS2Q9UQ26 1411 aa14.41□□□□□ -0.1
UBE3B-204ENST00000449510 ADGRL1O94910 1474 aa14.41□□□□□ -0.1
UBE3B-204ENST00000449510 USP27XA6NNY8 438 aa14.41□□□□□ -0.1
UBE3B-204ENST00000449510 NOM1Q5C9Z4 860 aaKnown RBP14.41□□□□□ -0.1
UBE3B-204ENST00000449510 KRBA2Q6ZNG9 492 aa14.41□□□□□ -0.1
UBE3B-204ENST00000449510 PPFIBP1Q86W92 1011 aa14.41□□□□□ -0.1
UBE3B-204ENST00000449510 HYPKQ9NX55 129 aa14.41□□□□□ -0.1
UBE3B-204ENST00000449510 RSPH14Q9UHP6 348 aa14.41□□□□□ -0.1
UBE3B-204ENST00000449510 SLC39A6Q13433 755 aa14.41□□□□□ -0.1
UBE3B-204ENST00000449510 KRT32Q14532 448 aa14.41□□□□□ -0.1
UBE3B-204ENST00000449510 UBE3BQ7Z3V4 1068 aa14.41□□□□□ -0.1
UBE3B-204ENST00000449510 ORC3Q9UBD5 711 aaPredicted RBP14.41□□□□□ -0.1
UBE3B-204ENST00000449510 PRDM15P57071 1507 aaPredicted RBP14.4□□□□□ -0.1
UBE3B-204ENST00000449510 SAFBQ15424 915 aaKnown RBP eCLIP14.4□□□□□ -0.1
UBE3B-204ENST00000449510 NUP133Q8WUM0 1156 aa14.4□□□□□ -0.1
UBE3B-204ENST00000449510 RAI14Q9P0K7 980 aa14.4□□□□□ -0.1
UBE3B-204ENST00000449510 SLC27A2O14975 620 aa14.4□□□□□ -0.1
UBE3B-204ENST00000449510 GSDMDP57764 484 aa14.4□□□□□ -0.1
UBE3B-204ENST00000449510 CLEC17AQ6ZS10 378 aa14.4□□□□□ -0.1
UBE3B-204ENST00000449510 SEC62Q99442 399 aaKnown RBP14.4□□□□□ -0.1
UBE3B-204ENST00000449510 PLCH2O75038 1416 aa14.4□□□□□ -0.1
UBE3B-204ENST00000449510 GOLGA8BA8MQT2 603 aa14.39□□□□□ -0.11
UBE3B-204ENST00000449510 NEMFO60524 1076 aa14.39□□□□□ -0.11
UBE3B-204ENST00000449510 DNA2P51530 1060 aa14.39□□□□□ -0.11
UBE3B-204ENST00000449510 GYS2P54840 703 aa14.39□□□□□ -0.11
UBE3B-204ENST00000449510 JAKMIP3Q5VZ66 844 aa14.39□□□□□ -0.11
UBE3B-204ENST00000449510 EPC1Q9H2F5 836 aa14.39□□□□□ -0.11
UBE3B-204ENST00000449510 SEC31AO94979 1220 aaKnown RBP14.39□□□□□ -0.11
UBE3B-204ENST00000449510 IPO7O95373 1038 aaKnown RBP14.39□□□□□ -0.11
UBE3B-204ENST00000449510 RHOXF2BP0C7M4 288 aa14.39□□□□□ -0.11
UBE3B-204ENST00000449510 EVCP57679 992 aa14.39□□□□□ -0.11
UBE3B-204ENST00000449510 SPECC1Q5M775 1068 aa14.39□□□□□ -0.11
UBE3B-204ENST00000449510 RHOXF2Q9BQY4 288 aa14.39□□□□□ -0.11
UBE3B-204ENST00000449510 CLSTN2Q9H4D0 955 aa14.39□□□□□ -0.11
UBE3B-204ENST00000449510 ARFGAP3Q9NP61 516 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 788.6 ms