RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 IARSP41252 1262 aaKnown RBP37.07■■■■□ 3.52
CBX4-202ENST00000448310 C3orf67Q6ZVT6 689 aa37.07■■■■□ 3.52
CBX4-202ENST00000448310 ANKRD36CQ5JPF3 1778 aa37.06■■■■□ 3.52
CBX4-202ENST00000448310 KRT24Q2M2I5 525 aa37.06■■■■□ 3.52
CBX4-202ENST00000448310 CHADLQ6NUI6 762 aa37.06■■■■□ 3.52
CBX4-202ENST00000448310 SLC51AQ86UW1 340 aa37.06■■■■□ 3.52
CBX4-202ENST00000448310 HOXA10P31260 410 aaPredicted RBP37.05■■■■□ 3.52
CBX4-202ENST00000448310 WDR43Q15061 677 aaKnown RBP eCLIP37.05■■■■□ 3.521e-5■■□□□ 14.2
CBX4-202ENST00000448310 PPP1R42Q7Z4L9 355 aa37.05■■■■□ 3.52
CBX4-202ENST00000448310 L3MBTL3Q96JM7 780 aaPredicted RBP37.05■■■■□ 3.52
CBX4-202ENST00000448310 RUNDC1Q96C34 613 aa37.04■■■■□ 3.52
CBX4-202ENST00000448310 TRIM35Q9UPQ4 493 aa37.04■■■■□ 3.52
CBX4-202ENST00000448310 LAS1LQ9Y4W2 734 aaKnown RBP37.04■■■■□ 3.52
CBX4-202ENST00000448310 IQCA1LA6NCM1 817 aa37.03■■■■□ 3.52
CBX4-202ENST00000448310 PARP10Q53GL7 1025 aa37.03■■■■□ 3.52
CBX4-202ENST00000448310 TCERG1O14776 1098 aaKnown RBP37.02■■■■□ 3.52
CBX4-202ENST00000448310 AIMP1Q12904 312 aaKnown RBP37.02■■■■□ 3.52
CBX4-202ENST00000448310 RBM17Q96I25 401 aaKnown RBP37.02■■■■□ 3.52
CBX4-202ENST00000448310 PSMD1Q99460 953 aa37.02■■■■□ 3.52
CBX4-202ENST00000448310 TAF1DQ9H5J8 278 aaPredicted RBP37.02■■■■□ 3.52
CBX4-202ENST00000448310 CHL1O00533 1208 aa37.01■■■■□ 3.52
CBX4-202ENST00000448310 COPS6Q7L5N1 327 aa37.01■■■■□ 3.52
CBX4-202ENST00000448310 XAGE3Q8WTP9 111 aa37.01■■■■□ 3.52
CBX4-202ENST00000448310 ADAMTS8Q9UP79 889 aa37.01■■■■□ 3.52
CBX4-202ENST00000448310 COL4A5P29400 1685 aa37■■■■□ 3.51
CBX4-202ENST00000448310 CRAMP1Q96RY5 1269 aa37■■■■□ 3.51
CBX4-202ENST00000448310 UTP14AQ9BVJ6 771 aaKnown RBP37■■■■□ 3.51
CBX4-202ENST00000448310 LAMB2P55268 1798 aa36.99■■■■□ 3.51
CBX4-202ENST00000448310 PCNTO95613 3336 aa36.99■■■■□ 3.51
CBX4-202ENST00000448310 FZD9O00144 591 aa36.99■■■■□ 3.51
CBX4-202ENST00000448310 CC2D2BQ6DHV5 1058 aa36.99■■■■□ 3.51
CBX4-202ENST00000448310 PPEF1O14829 653 aaPredicted RBP36.98■■■■□ 3.51
CBX4-202ENST00000448310 NLRP3Q96P20 1036 aa36.97■■■■□ 3.51
CBX4-202ENST00000448310 EAPPQ56P03 285 aaPredicted RBP36.96■■■■□ 3.51
CBX4-202ENST00000448310 LDHDQ86WU2 507 aa36.96■■■■□ 3.51
CBX4-202ENST00000448310 RNF123Q5XPI4 1314 aa36.95■■■■□ 3.51
CBX4-202ENST00000448310 JDP2Q8WYK2 163 aa36.95■■■■□ 3.51
CBX4-202ENST00000448310 DDX21Q9NR30 783 aaKnown RBP eCLIP36.95■■■■□ 3.51
CBX4-202ENST00000448310 HACL1Q9UJ83 578 aa36.95■■■■□ 3.51
CBX4-202ENST00000448310 SLC10A5Q5PT55 438 aa36.94■■■■□ 3.5
CBX4-202ENST00000448310 CHPF2Q9P2E5 772 aa36.94■■■■□ 3.5
CBX4-202ENST00000448310 NLRP10Q86W26 655 aa36.93■■■■□ 3.5
CBX4-202ENST00000448310 HSP90AB3PQ58FF7 597 aa36.92■■■■□ 3.5
CBX4-202ENST00000448310 PRKRIP1Q9H875 184 aaPredicted RBP36.92■■■■□ 3.5
CBX4-202ENST00000448310 ADAMTSL1Q8N6G6 1762 aa36.91■■■■□ 3.5
CBX4-202ENST00000448310 EPHX2P34913 555 aa36.91■■■■□ 3.5
CBX4-202ENST00000448310 ZNF428Q96B54 188 aa36.91■■■■□ 3.5
CBX4-202ENST00000448310 GPC2Q8N158 579 aa36.9■■■■□ 3.5
CBX4-202ENST00000448310 LARGE2Q8N3Y3 721 aa36.9■■■■□ 3.5
CBX4-202ENST00000448310 CREBZFQ9NS37 354 aa36.9■■■■□ 3.5
CBX4-202ENST00000448310 ABCC4O15439 1325 aa36.89■■■■□ 3.5
CBX4-202ENST00000448310 HCLS1P14317 486 aaPredicted RBP36.89■■■■□ 3.5
CBX4-202ENST00000448310 TCIRG1Q13488 830 aa36.89■■■■□ 3.5
CBX4-202ENST00000448310 GRIPAP1Q4V328 841 aa36.89■■■■□ 3.5
CBX4-202ENST00000448310 HDGFL1Q5TGJ6 251 aa36.89■■■■□ 3.5
CBX4-202ENST00000448310 CLEC11AQ9Y240 323 aa36.89■■■■□ 3.5
CBX4-202ENST00000448310 GJA3Q9Y6H8 435 aa36.89■■■■□ 3.5
CBX4-202ENST00000448310 PASKQ96RG2 1323 aa36.88■■■■□ 3.49
CBX4-202ENST00000448310 TAF1P21675 1872 aa36.88■■■■□ 3.49
CBX4-202ENST00000448310 EIF6P56537 245 aaKnown RBP36.88■■■■□ 3.49
CBX4-202ENST00000448310 MKRN1Q9UHC7 482 aaKnown RBP36.87■■■■□ 3.49
CBX4-202ENST00000448310 TRMT112Q9UI30 125 aaKnown RBP36.87■■■■□ 3.49
CBX4-202ENST00000448310 LTBP1Q14766 1721 aa36.87■■■■□ 3.49
CBX4-202ENST00000448310 COL13A1Q5TAT6 717 aaPredicted RBP36.86■■■■□ 3.49
CBX4-202ENST00000448310 ATP6V0A2Q9Y487 856 aa36.86■■■■□ 3.49
CBX4-202ENST00000448310 HSPA1AP0DMV8 641 aaKnown RBP36.84■■■■□ 3.49
CBX4-202ENST00000448310 HSPA1BP0DMV9 641 aaKnown RBP36.84■■■■□ 3.49
CBX4-202ENST00000448310 CFAP44Q96MT7 982 aa36.84■■■■□ 3.49
CBX4-202ENST00000448310 SH3TC1Q8TE82 1336 aa36.84■■■■□ 3.49
CBX4-202ENST00000448310 ITGBL1O95965 494 aaPredicted RBP36.83■■■■□ 3.49
CBX4-202ENST00000448310 TMX4Q9H1E5 349 aaPredicted RBP36.83■■■■□ 3.49
CBX4-202ENST00000448310 DDX60Q8IY21 1712 aaKnown RBP36.82■■■■□ 3.49
CBX4-202ENST00000448310 PPIP5K2O43314 1243 aa36.82■■■■□ 3.48
CBX4-202ENST00000448310 HOXB7P09629 217 aa36.82■■■■□ 3.48
CBX4-202ENST00000448310 AOC3Q16853 763 aa36.82■■■■□ 3.48
CBX4-202ENST00000448310 PNMA8AQ86V59 439 aaPredicted RBP36.82■■■■□ 3.48
CBX4-202ENST00000448310 MBIPQ9NS73 344 aa36.82■■■■□ 3.48
CBX4-202ENST00000448310 DUSP27Q5VZP5 1158 aa36.81■■■■□ 3.48
CBX4-202ENST00000448310 MAP1SQ66K74 1059 aaPredicted RBP36.81■■■■□ 3.48
CBX4-202ENST00000448310 NIM1KQ8IY84 436 aa36.81■■■■□ 3.48
CBX4-202ENST00000448310 PLBD2Q8NHP8 589 aa36.81■■■■□ 3.48
CBX4-202ENST00000448310 DBF4Q9UBU7 674 aaPredicted RBP36.81■■■■□ 3.48
CBX4-202ENST00000448310 APAF1O14727 1248 aa36.79■■■■□ 3.48
CBX4-202ENST00000448310 ANKRD13DQ6ZTN6 518 aa36.79■■■■□ 3.48
CBX4-202ENST00000448310 DDX46Q7L014 1031 aaKnown RBP36.78■■■■□ 3.48
CBX4-202ENST00000448310 ATP5J2-PTCD1G3V325 749 aa36.77■■■■□ 3.48
CBX4-202ENST00000448310 BBOX1O75936 387 aa36.77■■■■□ 3.48
CBX4-202ENST00000448310 LMOD1P29536 600 aaPredicted RBP36.77■■■■□ 3.48
CBX4-202ENST00000448310 SCNN1DP51172 638 aa36.77■■■■□ 3.48
CBX4-202ENST00000448310 CNTROBQ8N137 903 aa36.77■■■■□ 3.48
CBX4-202ENST00000448310 EPS15P42566 896 aa36.76■■■■□ 3.48
CBX4-202ENST00000448310 SP8Q8IXZ3 490 aa36.76■■■■□ 3.48
CBX4-202ENST00000448310 ISCA1Q9BUE6 129 aa36.76■■■■□ 3.48
CBX4-202ENST00000448310 CNTNAP1P78357 1384 aa36.76■■■■□ 3.47
CBX4-202ENST00000448310 TMEM88BA6NKF7 163 aa36.75■■■■□ 3.47
CBX4-202ENST00000448310 ZNF853P0CG23 659 aa36.75■■■■□ 3.47
CBX4-202ENST00000448310 GRAPQ13588 217 aa36.75■■■■□ 3.47
CBX4-202ENST00000448310 DPP8Q6V1X1 898 aaPredicted RBP36.75■■■■□ 3.47
CBX4-202ENST00000448310 GRAPLQ8TC17 118 aaPredicted RBP36.75■■■■□ 3.47
CBX4-202ENST00000448310 SUPT20HQ8NEM7 779 aa36.74■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms