RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 ZCCHC11Q5TAX3 1644 aaKnown RBP10.67□□□□□ -0.7
SMC6-207ENST00000448223 IFIT2P09913 472 aaKnown RBP10.67□□□□□ -0.7
SMC6-207ENST00000448223 ME1P48163 572 aa10.67□□□□□ -0.7
SMC6-207ENST00000448223 MCM6Q14566 821 aa10.67□□□□□ -0.7
SMC6-207ENST00000448223 SPECC1Q5M775 1068 aa10.67□□□□□ -0.7
SMC6-207ENST00000448223 NLRP1Q9C000 1473 aa10.67□□□□□ -0.7
SMC6-207ENST00000448223 TET3O43151 1660 aa10.67□□□□□ -0.7
SMC6-207ENST00000448223 SHROOM2Q13796 1616 aa10.67□□□□□ -0.7
SMC6-207ENST00000448223 IMMTQ16891 758 aaKnown RBP10.67□□□□□ -0.7
SMC6-207ENST00000448223 UVSSAQ2YD98 709 aa10.67□□□□□ -0.7
SMC6-207ENST00000448223 CCDC114Q96M63 670 aa10.67□□□□□ -0.7
SMC6-207ENST00000448223 GSDMDP57764 484 aa10.67□□□□□ -0.7
SMC6-207ENST00000448223 ZSCAN23Q3MJ62 389 aa10.67□□□□□ -0.7
SMC6-207ENST00000448223 SPATA32Q96LK8 384 aa10.67□□□□□ -0.7
SMC6-207ENST00000448223 SIL1Q9H173 461 aa10.67□□□□□ -0.7
SMC6-207ENST00000448223 RAI14Q9P0K7 980 aa10.67□□□□□ -0.7
SMC6-207ENST00000448223 KIF4AO95239 1232 aa10.67□□□□□ -0.7
SMC6-207ENST00000448223 GSPT1P15170 499 aaKnown RBP10.67□□□□□ -0.7
SMC6-207ENST00000448223 HDGFP51858 240 aaKnown RBP10.67□□□□□ -0.7
SMC6-207ENST00000448223 NBPF11Q86T75 865 aa10.67□□□□□ -0.7
SMC6-207ENST00000448223 MYOM1P52179 1685 aa10.67□□□□□ -0.7
SMC6-207ENST00000448223 KIF1BO60333 1816 aa10.67□□□□□ -0.7
SMC6-207ENST00000448223 ZMYM3Q14202 1370 aa10.66□□□□□ -0.7
SMC6-207ENST00000448223 GCOM1H8Y6P7 765 aaPredicted RBP10.66□□□□□ -0.7
SMC6-207ENST00000448223 MYZAPP0CAP1 466 aa10.66□□□□□ -0.7
SMC6-207ENST00000448223 GCKP35557 465 aa10.66□□□□□ -0.7
SMC6-207ENST00000448223 NFXL1Q6ZNB6 911 aa10.66□□□□□ -0.7
SMC6-207ENST00000448223 SPG7Q9UQ90 795 aa10.66□□□□□ -0.7
SMC6-207ENST00000448223 STK3Q13188 491 aa10.66□□□□□ -0.7
SMC6-207ENST00000448223 HDGFL1Q5TGJ6 251 aa10.66□□□□□ -0.7
SMC6-207ENST00000448223 TEFQ10587 303 aa10.66□□□□□ -0.7
SMC6-207ENST00000448223 SIRT2Q8IXJ6 389 aa10.66□□□□□ -0.7
SMC6-207ENST00000448223 ATRIPQ8WXE1 791 aa10.66□□□□□ -0.7
SMC6-207ENST00000448223 FEZ2Q9UHY8 353 aaPredicted RBP10.66□□□□□ -0.7
SMC6-207ENST00000448223 FAM177BA6PVY3 158 aa10.66□□□□□ -0.7
SMC6-207ENST00000448223 TERF1P54274 439 aa10.66□□□□□ -0.7
SMC6-207ENST00000448223 SEPT14Q6ZU15 432 aa10.66□□□□□ -0.7
SMC6-207ENST00000448223 CCDC83Q8IWF9 413 aa10.65□□□□□ -0.7
SMC6-207ENST00000448223 SRGAP3O43295 1099 aa10.65□□□□□ -0.7
SMC6-207ENST00000448223 SLU7O95391 586 aaKnown RBP10.65□□□□□ -0.7
SMC6-207ENST00000448223 RBBP5Q15291 538 aaKnown RBP10.65□□□□□ -0.7
SMC6-207ENST00000448223 RPAP2Q8IXW5 612 aaPredicted RBP10.65□□□□□ -0.7
SMC6-207ENST00000448223 CPA1P15085 419 aa10.65□□□□□ -0.7
SMC6-207ENST00000448223 TCEANC2Q96MN5 208 aa10.65□□□□□ -0.7
SMC6-207ENST00000448223 WASLO00401 505 aaPredicted RBP10.65□□□□□ -0.71
SMC6-207ENST00000448223 KDM4AO75164 1064 aa10.65□□□□□ -0.71
SMC6-207ENST00000448223 VPS18Q9P253 973 aa10.65□□□□□ -0.71
SMC6-207ENST00000448223 STAMBPO95630 424 aa10.64□□□□□ -0.71
SMC6-207ENST00000448223 PAFAH1B1P43034 410 aa10.64□□□□□ -0.71
SMC6-207ENST00000448223 CEBPAP49715 358 aaPredicted RBP10.64□□□□□ -0.71
SMC6-207ENST00000448223 UBE4AQ14139 1066 aa10.64□□□□□ -0.71
SMC6-207ENST00000448223 TMX3Q96JJ7 454 aa10.64□□□□□ -0.71
SMC6-207ENST00000448223 NAP1L3Q99457 506 aaPredicted RBP10.64□□□□□ -0.71
SMC6-207ENST00000448223 KLHL40Q2TBA0 621 aa10.64□□□□□ -0.71
SMC6-207ENST00000448223 LARP1BQ659C4 914 aaKnown RBP10.64□□□□□ -0.71
SMC6-207ENST00000448223 CEP112Q8N8E3 955 aa10.64□□□□□ -0.71
SMC6-207ENST00000448223 NPATQ14207 1427 aa10.64□□□□□ -0.71
SMC6-207ENST00000448223 ERBB4Q15303 1308 aa10.64□□□□□ -0.71
SMC6-207ENST00000448223 MX1P20591 662 aa10.64□□□□□ -0.71
SMC6-207ENST00000448223 DDX46Q7L014 1031 aaKnown RBP10.64□□□□□ -0.71
SMC6-207ENST00000448223 ABTB2Q8N961 1025 aa10.64□□□□□ -0.71
SMC6-207ENST00000448223 RBSNQ9H1K0 784 aa10.64□□□□□ -0.71
SMC6-207ENST00000448223 IQSEC2Q5JU85 1478 aa10.64□□□□□ -0.71
SMC6-207ENST00000448223 CAMK4Q16566 473 aa10.63□□□□□ -0.71
SMC6-207ENST00000448223 CEP85Q6P2H3 762 aa10.63□□□□□ -0.71
SMC6-207ENST00000448223 TOP1P11387 765 aaKnown RBP10.63□□□□□ -0.71
SMC6-207ENST00000448223 EIF4A2Q14240 407 aaKnown RBP10.63□□□□□ -0.71
SMC6-207ENST00000448223 MAATS1Q7Z4T9 603 aa10.63□□□□□ -0.71
SMC6-207ENST00000448223 ASXL2Q76L83 1435 aa10.63□□□□□ -0.71
SMC6-207ENST00000448223 POTEDQ86YR6 584 aa10.63□□□□□ -0.71
SMC6-207ENST00000448223 USP26Q9BXU7 913 aa10.63□□□□□ -0.71
SMC6-207ENST00000448223 SPATS2LQ9NUQ6 558 aaKnown RBP10.63□□□□□ -0.71
SMC6-207ENST00000448223 LUC7L2Q9Y383 392 aaKnown RBP10.63□□□□□ -0.71
SMC6-207ENST00000448223 HSF2BPO75031 334 aa10.63□□□□□ -0.71
SMC6-207ENST00000448223 ANO10Q9NW15 660 aa10.63□□□□□ -0.71
SMC6-207ENST00000448223 SYCP1Q15431 976 aa10.62□□□□□ -0.71
SMC6-207ENST00000448223 DNAJC21Q5F1R6 531 aaKnown RBP10.62□□□□□ -0.71
SMC6-207ENST00000448223 RALYLQ86SE5 291 aaKnown RBP10.62□□□□□ -0.71
SMC6-207ENST00000448223 LMNTD2Q8IXW0 634 aa10.62□□□□□ -0.71
SMC6-207ENST00000448223 DCTPP1Q9H773 170 aa10.62□□□□□ -0.71
SMC6-207ENST00000448223 BRMS1Q9HCU9 246 aa10.62□□□□□ -0.71
SMC6-207ENST00000448223 PPIP5K1Q6PFW1 1433 aa10.62□□□□□ -0.71
SMC6-207ENST00000448223 PDE1AP54750 535 aa10.62□□□□□ -0.71
SMC6-207ENST00000448223 ANKRD44Q8N8A2 993 aa10.62□□□□□ -0.71
SMC6-207ENST00000448223 JARID2Q92833 1246 aaPredicted RBP10.62□□□□□ -0.71
SMC6-207ENST00000448223 GTF3C6Q969F1 213 aa10.62□□□□□ -0.71
SMC6-207ENST00000448223 ZSWIM4Q9H7M6 989 aa10.62□□□□□ -0.71
SMC6-207ENST00000448223 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.62□□□□□ -0.71
SMC6-207ENST00000448223 GNAI3P08754 354 aa10.62□□□□□ -0.71
SMC6-207ENST00000448223 DBN1Q16643 649 aa10.62□□□□□ -0.71
SMC6-207ENST00000448223 CCDC30Q5VVM6 783 aa10.62□□□□□ -0.71
SMC6-207ENST00000448223 ANKS4BQ8N8V4 417 aa10.62□□□□□ -0.71
SMC6-207ENST00000448223 ZNF692Q9BU19 519 aaPredicted RBP10.62□□□□□ -0.71
SMC6-207ENST00000448223 STIM1Q13586 685 aa10.62□□□□□ -0.71
SMC6-207ENST00000448223 XBP1P17861 261 aa10.61□□□□□ -0.71
SMC6-207ENST00000448223 U2AF2P26368 475 aaKnown RBP eCLIP10.61□□□□□ -0.711e-8■■■■□ 20
SMC6-207ENST00000448223 C17orf53Q8N3J3 647 aaPredicted RBP10.61□□□□□ -0.71
SMC6-207ENST00000448223 EID1Q9Y6B2 187 aa10.61□□□□□ -0.71
SMC6-207ENST00000448223 ERICH2A1L162 156 aa10.61□□□□□ -0.71
SMC6-207ENST00000448223 GNG11P61952 73 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms