RNA–Protein interactions for RNA: ENST00000446930.1

RGPD6-204, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 4

Gene RGPD6, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-204ENST00000446930 HOXB7P09629 217 aa23.13■■□□□ 1.29
RGPD6-204ENST00000446930 EIF2S2P20042 333 aaKnown RBP23.13■■□□□ 1.29
RGPD6-204ENST00000446930 PROSER3Q2NL68 480 aa23.13■■□□□ 1.29
RGPD6-204ENST00000446930 CCDC146Q8IYE0 955 aa23.13■■□□□ 1.29
RGPD6-204ENST00000446930 RPGRQ92834 1020 aaKnown RBP23.13■■□□□ 1.29
RGPD6-204ENST00000446930 CRAMP1Q96RY5 1269 aa23.13■■□□□ 1.29
RGPD6-204ENST00000446930 ADAMTS8Q9UP79 889 aa23.13■■□□□ 1.29
RGPD6-204ENST00000446930 SLC10A5Q5PT55 438 aa23.12■■□□□ 1.29
RGPD6-204ENST00000446930 OLFM4Q6UX06 510 aa23.12■■□□□ 1.29
RGPD6-204ENST00000446930 DDX21Q9NR30 783 aaKnown RBP eCLIP23.12■■□□□ 1.29
RGPD6-204ENST00000446930 ZNF277Q9NRM2 450 aaPredicted RBP23.11■■□□□ 1.29
RGPD6-204ENST00000446930 FZD9O00144 591 aa23.1■■□□□ 1.29
RGPD6-204ENST00000446930 IARSP41252 1262 aaKnown RBP23.1■■□□□ 1.29
RGPD6-204ENST00000446930 HTRA3P83110 453 aa23.1■■□□□ 1.29
RGPD6-204ENST00000446930 NEUROD2Q15784 382 aa23.1■■□□□ 1.29
RGPD6-204ENST00000446930 HSP90AB3PQ58FF7 597 aa23.1■■□□□ 1.29
RGPD6-204ENST00000446930 PCNTO95613 3336 aa23.1■■□□□ 1.29
RGPD6-204ENST00000446930 IFFO2Q5TF58 517 aa23.09■■□□□ 1.29
RGPD6-204ENST00000446930 COPS6Q7L5N1 327 aa23.09■■□□□ 1.29
RGPD6-204ENST00000446930 RBM17Q96I25 401 aaKnown RBP23.09■■□□□ 1.29
RGPD6-204ENST00000446930 UTP14AQ9BVJ6 771 aaKnown RBP23.09■■□□□ 1.29
RGPD6-204ENST00000446930 ANXA1P04083 346 aa23.08■■□□□ 1.29
RGPD6-204ENST00000446930 CHADLQ6NUI6 762 aa23.08■■□□□ 1.29
RGPD6-204ENST00000446930 SYNE4Q8N205 404 aa23.08■■□□□ 1.29
RGPD6-204ENST00000446930 CFAP44Q96MT7 982 aa23.08■■□□□ 1.29
RGPD6-204ENST00000446930 NLRP3Q96P20 1036 aa23.08■■□□□ 1.29
RGPD6-204ENST00000446930 ZNF541Q9H0D2 1346 aa23.08■■□□□ 1.28
RGPD6-204ENST00000446930 LAMB2P55268 1798 aa23.07■■□□□ 1.28
RGPD6-204ENST00000446930 XAGE3Q8WTP9 111 aa23.07■■□□□ 1.28
RGPD6-204ENST00000446930 ADAMTSL1Q8N6G6 1762 aa23.06■■□□□ 1.28
RGPD6-204ENST00000446930 TCIRG1Q13488 830 aa23.06■■□□□ 1.28
RGPD6-204ENST00000446930 KRT24Q2M2I5 525 aa23.06■■□□□ 1.28
RGPD6-204ENST00000446930 C3orf67Q6ZVT6 689 aa23.06■■□□□ 1.28
RGPD6-204ENST00000446930 NLRP10Q86W26 655 aa23.06■■□□□ 1.28
RGPD6-204ENST00000446930 TAF1DQ9H5J8 278 aaPredicted RBP23.06■■□□□ 1.28
RGPD6-204ENST00000446930 PPEF1O14829 653 aaPredicted RBP23.05■■□□□ 1.28
RGPD6-204ENST00000446930 LDHDQ86WU2 507 aa23.05■■□□□ 1.28
RGPD6-204ENST00000446930 GPC2Q8N158 579 aa23.05■■□□□ 1.28
RGPD6-204ENST00000446930 JDP2Q8WYK2 163 aa23.05■■□□□ 1.28
RGPD6-204ENST00000446930 COL4A5P29400 1685 aa23.04■■□□□ 1.28
RGPD6-204ENST00000446930 HDGFL1Q5TGJ6 251 aa23.04■■□□□ 1.28
RGPD6-204ENST00000446930 CHPF2Q9P2E5 772 aa23.04■■□□□ 1.28
RGPD6-204ENST00000446930 DBF4Q9UBU7 674 aaPredicted RBP23.04■■□□□ 1.28
RGPD6-204ENST00000446930 ZNF853P0CG23 659 aa23.03■■□□□ 1.28
RGPD6-204ENST00000446930 POTEIP0CG38 1075 aa23.03■■□□□ 1.28
RGPD6-204ENST00000446930 POTEJP0CG39 1038 aa23.03■■□□□ 1.28
RGPD6-204ENST00000446930 NECTIN2Q92692 538 aa23.03■■□□□ 1.28
RGPD6-204ENST00000446930 VPS33BQ9H267 617 aa23.03■■□□□ 1.28
RGPD6-204ENST00000446930 HACL1Q9UJ83 578 aa23.03■■□□□ 1.28
RGPD6-204ENST00000446930 AIMP1Q12904 312 aaKnown RBP23.02■■□□□ 1.28
RGPD6-204ENST00000446930 PLBD2Q8NHP8 589 aa23.02■■□□□ 1.28
RGPD6-204ENST00000446930 ATP6V0A2Q9Y487 856 aa23.02■■□□□ 1.28
RGPD6-204ENST00000446930 LAS1LQ9Y4W2 734 aaKnown RBP23.02■■□□□ 1.28
RGPD6-204ENST00000446930 SH3TC1Q8TE82 1336 aa23.02■■□□□ 1.28
RGPD6-204ENST00000446930 CALD1Q05682 793 aaKnown RBP23.01■■□□□ 1.27
RGPD6-204ENST00000446930 CREBZFQ9NS37 354 aa23.01■■□□□ 1.27
RGPD6-204ENST00000446930 MBIPQ9NS73 344 aa23.01■■□□□ 1.27
RGPD6-204ENST00000446930 PASKQ96RG2 1323 aa23.01■■□□□ 1.27
RGPD6-204ENST00000446930 BBOX1O75936 387 aa23■■□□□ 1.27
RGPD6-204ENST00000446930 PNMA8AQ86V59 439 aaPredicted RBP23■■□□□ 1.27
RGPD6-204ENST00000446930 IFT57Q9NWB7 429 aa23■■□□□ 1.27
RGPD6-204ENST00000446930 HYPKQ9NX55 129 aa23■■□□□ 1.27
RGPD6-204ENST00000446930 TRMT112Q9UI30 125 aaKnown RBP23■■□□□ 1.27
RGPD6-204ENST00000446930 ABCC4O15439 1325 aa23■■□□□ 1.27
RGPD6-204ENST00000446930 DDX60Q8IY21 1712 aaKnown RBP22.99■■□□□ 1.27
RGPD6-204ENST00000446930 EPHX2P34913 555 aa22.99■■□□□ 1.27
RGPD6-204ENST00000446930 DUSP27Q5VZP5 1158 aa22.99■■□□□ 1.27
RGPD6-204ENST00000446930 ANKRD13DQ6ZTN6 518 aa22.99■■□□□ 1.27
RGPD6-204ENST00000446930 RTFDC1Q9BY42 306 aaPredicted RBP22.99■■□□□ 1.27
RGPD6-204ENST00000446930 LRRC37AA6NMS7 1700 aa22.99■■□□□ 1.27
RGPD6-204ENST00000446930 APAF1O14727 1248 aa22.98■■□□□ 1.27
RGPD6-204ENST00000446930 EIF6P56537 245 aaKnown RBP22.98■■□□□ 1.27
RGPD6-204ENST00000446930 TMX4Q9H1E5 349 aaPredicted RBP22.98■■□□□ 1.27
RGPD6-204ENST00000446930 GNAI1P63096 354 aa22.97■■□□□ 1.27
RGPD6-204ENST00000446930 TRIM28Q13263 835 aaKnown RBP22.97■■□□□ 1.27
RGPD6-204ENST00000446930 SP8Q8IXZ3 490 aa22.97■■□□□ 1.27
RGPD6-204ENST00000446930 LARGE2Q8N3Y3 721 aa22.97■■□□□ 1.27
RGPD6-204ENST00000446930 ISCA1Q9BUE6 129 aa22.97■■□□□ 1.27
RGPD6-204ENST00000446930 ITGBL1O95965 494 aaPredicted RBP22.96■■□□□ 1.27
RGPD6-204ENST00000446930 HCLS1P14317 486 aaPredicted RBP22.96■■□□□ 1.27
RGPD6-204ENST00000446930 TMC4Q7Z404 712 aa22.96■■□□□ 1.27
RGPD6-204ENST00000446930 SUPT20HQ8NEM7 779 aa22.96■■□□□ 1.27
RGPD6-204ENST00000446930 LTBP1Q14766 1721 aa22.96■■□□□ 1.27
RGPD6-204ENST00000446930 SLC51AQ86UW1 340 aa22.95■■□□□ 1.26
RGPD6-204ENST00000446930 GRAPQ13588 217 aa22.94■■□□□ 1.26
RGPD6-204ENST00000446930 DDX46Q7L014 1031 aaKnown RBP22.94■■□□□ 1.26
RGPD6-204ENST00000446930 NIM1KQ8IY84 436 aa22.94■■□□□ 1.26
RGPD6-204ENST00000446930 GRAPLQ8TC17 118 aaPredicted RBP22.94■■□□□ 1.26
RGPD6-204ENST00000446930 EAPPQ56P03 285 aaPredicted RBP22.93■■□□□ 1.26
RGPD6-204ENST00000446930 CHMP4AQ9BY43 222 aa22.93■■□□□ 1.26
RGPD6-204ENST00000446930 TAF1P21675 1872 aa22.92■■□□□ 1.26
RGPD6-204ENST00000446930 TCERG1O14776 1098 aaKnown RBP22.92■■□□□ 1.26
RGPD6-204ENST00000446930 PPIP5K2O43314 1243 aa22.92■■□□□ 1.26
RGPD6-204ENST00000446930 SCNN1DP51172 638 aa22.92■■□□□ 1.26
RGPD6-204ENST00000446930 SF3B3Q15393 1217 aaKnown RBP22.92■■□□□ 1.26
RGPD6-204ENST00000446930 LMOD1P29536 600 aaPredicted RBP22.91■■□□□ 1.26
RGPD6-204ENST00000446930 AOC3Q16853 763 aa22.91■■□□□ 1.26
RGPD6-204ENST00000446930 DPP8Q6V1X1 898 aaPredicted RBP22.91■■□□□ 1.26
RGPD6-204ENST00000446930 DUOX1Q9NRD9 1551 aa22.91■■□□□ 1.26
RGPD6-204ENST00000446930 CNTNAP1P78357 1384 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms