RNA–Protein interactions for RNA: ENST00000445153.1

SMARCAL1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 5

Gene SMARCAL1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-210ENST00000445153 PSMD1Q99460 953 aa18.71■□□□□ 0.59
SMARCAL1-210ENST00000445153 HACL1Q9UJ83 578 aa18.71■□□□□ 0.59
SMARCAL1-210ENST00000445153 RNF123Q5XPI4 1314 aa18.71■□□□□ 0.59
SMARCAL1-210ENST00000445153 TCERG1O14776 1098 aaKnown RBP18.7■□□□□ 0.58
SMARCAL1-210ENST00000445153 ANXA1P04083 346 aa18.7■□□□□ 0.58
SMARCAL1-210ENST00000445153 EPHX2P34913 555 aa18.7■□□□□ 0.58
SMARCAL1-210ENST00000445153 RIPK4P57078 832 aa18.7■□□□□ 0.58
SMARCAL1-210ENST00000445153 PROSER3Q2NL68 480 aa18.7■□□□□ 0.58
SMARCAL1-210ENST00000445153 TNS4Q8IZW8 715 aa18.7■□□□□ 0.58
SMARCAL1-210ENST00000445153 TSPYL4Q9UJ04 414 aa18.7■□□□□ 0.58
SMARCAL1-210ENST00000445153 MAPK8IP3Q9UPT6 1336 aa18.7■□□□□ 0.58
SMARCAL1-210ENST00000445153 EIF2S2P20042 333 aaKnown RBP18.69■□□□□ 0.58
SMARCAL1-210ENST00000445153 RPGRQ92834 1020 aaKnown RBP18.69■□□□□ 0.58
SMARCAL1-210ENST00000445153 IBTKQ9P2D0 1353 aaPredicted RBP18.68■□□□□ 0.58
SMARCAL1-210ENST00000445153 RIC1Q4ADV7 1423 aa18.68■□□□□ 0.58
SMARCAL1-210ENST00000445153 CAPN15O75808 1086 aa18.68■□□□□ 0.58
SMARCAL1-210ENST00000445153 GPC2Q8N158 579 aa18.68■□□□□ 0.58
SMARCAL1-210ENST00000445153 CRAMP1Q96RY5 1269 aa18.68■□□□□ 0.58
SMARCAL1-210ENST00000445153 PNNQ9H307 717 aaKnown RBP18.68■□□□□ 0.58
SMARCAL1-210ENST00000445153 CLEC11AQ9Y240 323 aa18.68■□□□□ 0.58
SMARCAL1-210ENST00000445153 ERBB4Q15303 1308 aa18.68■□□□□ 0.58
SMARCAL1-210ENST00000445153 ADAMTSL1Q8N6G6 1762 aa18.68■□□□□ 0.58
SMARCAL1-210ENST00000445153 TMPOP42166 694 aaKnown RBP18.67■□□□□ 0.58
SMARCAL1-210ENST00000445153 MAP1SQ66K74 1059 aaPredicted RBP18.67■□□□□ 0.58
SMARCAL1-210ENST00000445153 CC2D2BQ6DHV5 1058 aa18.67■□□□□ 0.58
SMARCAL1-210ENST00000445153 CNTNAP1P78357 1384 aa18.67■□□□□ 0.58
SMARCAL1-210ENST00000445153 JDP2Q8WYK2 163 aa18.66■□□□□ 0.58
SMARCAL1-210ENST00000445153 NECTIN2Q92692 538 aa18.66■□□□□ 0.58
SMARCAL1-210ENST00000445153 RBM17Q96I25 401 aaKnown RBP18.66■□□□□ 0.58
SMARCAL1-210ENST00000445153 TMEM88BA6NKF7 163 aa18.65■□□□□ 0.58
SMARCAL1-210ENST00000445153 PPEF1O14829 653 aaPredicted RBP18.65■□□□□ 0.58
SMARCAL1-210ENST00000445153 KRT24Q2M2I5 525 aa18.65■□□□□ 0.58
SMARCAL1-210ENST00000445153 SLC10A5Q5PT55 438 aa18.65■□□□□ 0.58
SMARCAL1-210ENST00000445153 CNTROBQ8N137 903 aa18.65■□□□□ 0.58
SMARCAL1-210ENST00000445153 GJA3Q9Y6H8 435 aa18.65■□□□□ 0.58
SMARCAL1-210ENST00000445153 LTBP1Q14766 1721 aa18.65■□□□□ 0.58
SMARCAL1-210ENST00000445153 EPS15P42566 896 aa18.64■□□□□ 0.57
SMARCAL1-210ENST00000445153 VEGFBP49765 207 aa18.64■□□□□ 0.57
SMARCAL1-210ENST00000445153 FMR1Q06787 632 aaKnown RBP eCLIP18.64■□□□□ 0.57
SMARCAL1-210ENST00000445153 PARP10Q53GL7 1025 aa18.64■□□□□ 0.57
SMARCAL1-210ENST00000445153 COPS6Q7L5N1 327 aa18.64■□□□□ 0.57
SMARCAL1-210ENST00000445153 PPP1R42Q7Z4L9 355 aa18.64■□□□□ 0.57
SMARCAL1-210ENST00000445153 PNMA8AQ86V59 439 aaPredicted RBP18.64■□□□□ 0.57
SMARCAL1-210ENST00000445153 LARGE2Q8N3Y3 721 aa18.64■□□□□ 0.57
SMARCAL1-210ENST00000445153 FOXN1O15353 648 aa18.63■□□□□ 0.57
SMARCAL1-210ENST00000445153 SCNN1DP51172 638 aa18.63■□□□□ 0.57
SMARCAL1-210ENST00000445153 EIF6P56537 245 aaKnown RBP18.63■□□□□ 0.57
SMARCAL1-210ENST00000445153 RALBP1Q15311 655 aa18.63■□□□□ 0.57
SMARCAL1-210ENST00000445153 CCDC146Q8IYE0 955 aa18.63■□□□□ 0.57
SMARCAL1-210ENST00000445153 NLRP3Q96P20 1036 aa18.63■□□□□ 0.57
SMARCAL1-210ENST00000445153 UTP14AQ9BVJ6 771 aaKnown RBP18.63■□□□□ 0.57
SMARCAL1-210ENST00000445153 AIMP1Q12904 312 aaKnown RBP18.62■□□□□ 0.57
SMARCAL1-210ENST00000445153 NEUROD2Q15784 382 aa18.62■□□□□ 0.57
SMARCAL1-210ENST00000445153 XAGE3Q8WTP9 111 aa18.62■□□□□ 0.57
SMARCAL1-210ENST00000445153 BABAM1Q9NWV8 329 aa18.62■□□□□ 0.57
SMARCAL1-210ENST00000445153 ABCC4O15439 1325 aa18.61■□□□□ 0.57
SMARCAL1-210ENST00000445153 AOC3Q16853 763 aa18.61■□□□□ 0.57
SMARCAL1-210ENST00000445153 NLRP10Q86W26 655 aa18.61■□□□□ 0.57
SMARCAL1-210ENST00000445153 ZNF428Q96B54 188 aa18.61■□□□□ 0.57
SMARCAL1-210ENST00000445153 ATP6V0A2Q9Y487 856 aa18.61■□□□□ 0.57
SMARCAL1-210ENST00000445153 CHL1O00533 1208 aa18.6■□□□□ 0.57
SMARCAL1-210ENST00000445153 HCLS1P14317 486 aaPredicted RBP18.6■□□□□ 0.57
SMARCAL1-210ENST00000445153 DDX10Q13206 875 aaKnown RBP18.6■□□□□ 0.57
SMARCAL1-210ENST00000445153 GRIPAP1Q4V328 841 aa18.6■□□□□ 0.57
SMARCAL1-210ENST00000445153 TRIM35Q9UPQ4 493 aa18.6■□□□□ 0.57
SMARCAL1-210ENST00000445153 PPIP5K2O43314 1243 aa18.59■□□□□ 0.57
SMARCAL1-210ENST00000445153 RASSF10A6NK89 507 aa18.58■□□□□ 0.56
SMARCAL1-210ENST00000445153 TCIRG1Q13488 830 aa18.58■□□□□ 0.56
SMARCAL1-210ENST00000445153 DEFB115Q30KQ5 88 aa18.58■□□□□ 0.56
SMARCAL1-210ENST00000445153 NIM1KQ8IY84 436 aa18.58■□□□□ 0.56
SMARCAL1-210ENST00000445153 RTFDC1Q9BY42 306 aaPredicted RBP18.58■□□□□ 0.56
SMARCAL1-210ENST00000445153 DDX21Q9NR30 783 aaKnown RBP eCLIP18.58■□□□□ 0.56
SMARCAL1-210ENST00000445153 CXCL9Q07325 125 aa18.57■□□□□ 0.56
SMARCAL1-210ENST00000445153 SP8Q8IXZ3 490 aa18.57■□□□□ 0.56
SMARCAL1-210ENST00000445153 WBP1LQ9NX94 342 aa18.57■□□□□ 0.56
SMARCAL1-210ENST00000445153 LAS1LQ9Y4W2 734 aaKnown RBP18.57■□□□□ 0.56
SMARCAL1-210ENST00000445153 LAMB2P55268 1798 aa18.56■□□□□ 0.56
SMARCAL1-210ENST00000445153 TRAF5O00463 557 aa18.56■□□□□ 0.56
SMARCAL1-210ENST00000445153 BBOX1O75936 387 aa18.56■□□□□ 0.56
SMARCAL1-210ENST00000445153 LMOD1P29536 600 aaPredicted RBP18.56■□□□□ 0.56
SMARCAL1-210ENST00000445153 LMOD3Q0VAK6 560 aa18.56■□□□□ 0.56
SMARCAL1-210ENST00000445153 CHPF2Q9P2E5 772 aa18.56■□□□□ 0.56
SMARCAL1-210ENST00000445153 TRMT112Q9UI30 125 aaKnown RBP18.56■□□□□ 0.56
SMARCAL1-210ENST00000445153 MYBBP1AQ9BQG0 1328 aaKnown RBP18.55■□□□□ 0.56
SMARCAL1-210ENST00000445153 HSP90AB3PQ58FF7 597 aa18.55■□□□□ 0.56
SMARCAL1-210ENST00000445153 CST9Q5W186 159 aa18.55■□□□□ 0.56
SMARCAL1-210ENST00000445153 RUNDC1Q96C34 613 aa18.55■□□□□ 0.56
SMARCAL1-210ENST00000445153 ZNRF3Q9ULT6 936 aa18.55■□□□□ 0.56
SMARCAL1-210ENST00000445153 ADAMTS8Q9UP79 889 aa18.55■□□□□ 0.56
SMARCAL1-210ENST00000445153 ANKRD36CQ5JPF3 1778 aa18.55■□□□□ 0.56
SMARCAL1-210ENST00000445153 TAF1P21675 1872 aa18.54■□□□□ 0.56
SMARCAL1-210ENST00000445153 USP50Q70EL3 339 aaPredicted RBP18.54■□□□□ 0.56
SMARCAL1-210ENST00000445153 MPNDQ8N594 471 aa18.54■□□□□ 0.56
SMARCAL1-210ENST00000445153 VPS33BQ9H267 617 aa18.54■□□□□ 0.56
SMARCAL1-210ENST00000445153 GPRC5DQ9NZD1 345 aa18.54■□□□□ 0.56
SMARCAL1-210ENST00000445153 ABT1Q9ULW3 272 aaKnown RBP18.54■□□□□ 0.56
SMARCAL1-210ENST00000445153 SH3TC1Q8TE82 1336 aa18.53■□□□□ 0.56
SMARCAL1-210ENST00000445153 WDR33Q9C0J8 1336 aaKnown RBP18.53■□□□□ 0.56
SMARCAL1-210ENST00000445153 GRAPQ13588 217 aa18.53■□□□□ 0.56
SMARCAL1-210ENST00000445153 DPP8Q6V1X1 898 aaPredicted RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms