RNA–Protein interactions for RNA: ENST00000444179.5

SHC1-208, Transcript of SHC adaptor protein 1, humanhuman

TSL 2

Gene SHC1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-208ENST00000444179 CCDC88AQ3V6T2 1871 aa14.27□□□□□ -0.12
SHC1-208ENST00000444179 NUP98P52948 1817 aa14.27□□□□□ -0.12
SHC1-208ENST00000444179 WDR90Q96KV7 1748 aa14.27□□□□□ -0.12
SHC1-208ENST00000444179 RIC1Q4ADV7 1423 aa14.27□□□□□ -0.12
SHC1-208ENST00000444179 AIMP1Q12904 312 aaKnown RBP14.27□□□□□ -0.13
SHC1-208ENST00000444179 SYNE4Q8N205 404 aa14.27□□□□□ -0.13
SHC1-208ENST00000444179 CACNA1SQ13698 1873 aa14.27□□□□□ -0.13
SHC1-208ENST00000444179 ZNF541Q9H0D2 1346 aa14.26□□□□□ -0.13
SHC1-208ENST00000444179 CCDC184Q52MB2 194 aa14.26□□□□□ -0.13
SHC1-208ENST00000444179 SLC10A5Q5PT55 438 aa14.26□□□□□ -0.13
SHC1-208ENST00000444179 RTKN2Q8IZC4 609 aa14.26□□□□□ -0.13
SHC1-208ENST00000444179 DDX21Q9NR30 783 aaKnown RBP eCLIP14.26□□□□□ -0.13
SHC1-208ENST00000444179 CHPF2Q9P2E5 772 aa14.26□□□□□ -0.13
SHC1-208ENST00000444179 ZNF853P0CG23 659 aa14.25□□□□□ -0.13
SHC1-208ENST00000444179 PARP10Q53GL7 1025 aa14.25□□□□□ -0.13
SHC1-208ENST00000444179 NLRP10Q86W26 655 aa14.25□□□□□ -0.13
SHC1-208ENST00000444179 ZNF428Q96B54 188 aa14.25□□□□□ -0.13
SHC1-208ENST00000444179 COL4A5P29400 1685 aa14.25□□□□□ -0.13
SHC1-208ENST00000444179 DICER1Q9UPY3 1922 aaKnown RBP14.25□□□□□ -0.13
SHC1-208ENST00000444179 APAF1O14727 1248 aa14.24□□□□□ -0.13
SHC1-208ENST00000444179 TCERG1O14776 1098 aaKnown RBP14.24□□□□□ -0.13
SHC1-208ENST00000444179 IARSP41252 1262 aaKnown RBP14.24□□□□□ -0.13
SHC1-208ENST00000444179 PPP1R42Q7Z4L9 355 aa14.24□□□□□ -0.13
SHC1-208ENST00000444179 RPGRQ92834 1020 aaKnown RBP14.24□□□□□ -0.13
SHC1-208ENST00000444179 KLRG1Q96E93 195 aa14.24□□□□□ -0.13
SHC1-208ENST00000444179 L3MBTL3Q96JM7 780 aaPredicted RBP14.24□□□□□ -0.13
SHC1-208ENST00000444179 CFAP44Q96MT7 982 aa14.24□□□□□ -0.13
SHC1-208ENST00000444179 CRAMP1Q96RY5 1269 aa14.24□□□□□ -0.13
SHC1-208ENST00000444179 PSMD1Q99460 953 aa14.24□□□□□ -0.13
SHC1-208ENST00000444179 UTP14AQ9BVJ6 771 aaKnown RBP14.24□□□□□ -0.13
SHC1-208ENST00000444179 MBIPQ9NS73 344 aa14.24□□□□□ -0.13
SHC1-208ENST00000444179 FZD9O00144 591 aa14.23□□□□□ -0.13
SHC1-208ENST00000444179 HCLS1P14317 486 aaPredicted RBP14.23□□□□□ -0.13
SHC1-208ENST00000444179 TCIRG1Q13488 830 aa14.23□□□□□ -0.13
SHC1-208ENST00000444179 RBM17Q96I25 401 aaKnown RBP14.23□□□□□ -0.13
SHC1-208ENST00000444179 PPEF1O14829 653 aaPredicted RBP14.22□□□□□ -0.13
SHC1-208ENST00000444179 HDGFL1Q5TGJ6 251 aa14.22□□□□□ -0.13
SHC1-208ENST00000444179 DUSP27Q5VZP5 1158 aa14.22□□□□□ -0.13
SHC1-208ENST00000444179 TAF1DQ9H5J8 278 aaPredicted RBP14.22□□□□□ -0.13
SHC1-208ENST00000444179 ABCC4O15439 1325 aa14.21□□□□□ -0.13
SHC1-208ENST00000444179 HOXB7P09629 217 aa14.21□□□□□ -0.13
SHC1-208ENST00000444179 CC2D2BQ6DHV5 1058 aa14.21□□□□□ -0.13
SHC1-208ENST00000444179 CHADLQ6NUI6 762 aa14.21□□□□□ -0.13
SHC1-208ENST00000444179 JMYQ8N9B5 988 aa14.21□□□□□ -0.13
SHC1-208ENST00000444179 NLRP3Q96P20 1036 aa14.21□□□□□ -0.13
SHC1-208ENST00000444179 PLBD2Q8NHP8 589 aa14.2□□□□□ -0.14
SHC1-208ENST00000444179 ISCA1Q9BUE6 129 aa14.2□□□□□ -0.14
SHC1-208ENST00000444179 TRMT112Q9UI30 125 aaKnown RBP14.2□□□□□ -0.14
SHC1-208ENST00000444179 ATP6V0A2Q9Y487 856 aa14.2□□□□□ -0.14
SHC1-208ENST00000444179 RNF123Q5XPI4 1314 aa14.19□□□□□ -0.14
SHC1-208ENST00000444179 ELL2O00472 640 aaPredicted RBP14.19□□□□□ -0.14
SHC1-208ENST00000444179 HSP90AB3PQ58FF7 597 aa14.19□□□□□ -0.14
SHC1-208ENST00000444179 ANKRD13DQ6ZTN6 518 aa14.19□□□□□ -0.14
SHC1-208ENST00000444179 C8orf58Q8NAV2 365 aa14.19□□□□□ -0.14
SHC1-208ENST00000444179 IFT57Q9NWB7 429 aa14.19□□□□□ -0.14
SHC1-208ENST00000444179 DBF4Q9UBU7 674 aaPredicted RBP14.19□□□□□ -0.14
SHC1-208ENST00000444179 ATP5J2-PTCD1G3V325 749 aa14.18□□□□□ -0.14
SHC1-208ENST00000444179 GPC2Q8N158 579 aa14.18□□□□□ -0.14
SHC1-208ENST00000444179 FAM89AQ96GI7 184 aa14.18□□□□□ -0.14
SHC1-208ENST00000444179 PHAXQ9H814 394 aaKnown RBP14.18□□□□□ -0.14
SHC1-208ENST00000444179 SH3TC1Q8TE82 1336 aa14.17□□□□□ -0.14
SHC1-208ENST00000444179 IQCA1LA6NCM1 817 aa14.17□□□□□ -0.14
SHC1-208ENST00000444179 ITGBL1O95965 494 aaPredicted RBP14.17□□□□□ -0.14
SHC1-208ENST00000444179 EPHX2P34913 555 aa14.17□□□□□ -0.14
SHC1-208ENST00000444179 IFFO2Q5TF58 517 aa14.17□□□□□ -0.14
SHC1-208ENST00000444179 JDP2Q8WYK2 163 aa14.17□□□□□ -0.14
SHC1-208ENST00000444179 RTFDC1Q9BY42 306 aaPredicted RBP14.17□□□□□ -0.14
SHC1-208ENST00000444179 HYPKQ9NX55 129 aa14.17□□□□□ -0.14
SHC1-208ENST00000444179 HACL1Q9UJ83 578 aa14.17□□□□□ -0.14
SHC1-208ENST00000444179 PASKQ96RG2 1323 aa14.16□□□□□ -0.14
SHC1-208ENST00000444179 BBOX1O75936 387 aa14.16□□□□□ -0.14
SHC1-208ENST00000444179 GNAI1P63096 354 aa14.16□□□□□ -0.14
SHC1-208ENST00000444179 AOC3Q16853 763 aa14.16□□□□□ -0.14
SHC1-208ENST00000444179 GRIPAP1Q4V328 841 aa14.16□□□□□ -0.14
SHC1-208ENST00000444179 LDHDQ86WU2 507 aa14.16□□□□□ -0.14
SHC1-208ENST00000444179 SP8Q8IXZ3 490 aa14.16□□□□□ -0.14
SHC1-208ENST00000444179 LARGE2Q8N3Y3 721 aa14.16□□□□□ -0.14
SHC1-208ENST00000444179 GJA3Q9Y6H8 435 aa14.16□□□□□ -0.14
SHC1-208ENST00000444179 COL4A1P02462 1669 aa14.16□□□□□ -0.14
SHC1-208ENST00000444179 ANKRD36CQ5JPF3 1778 aa14.15□□□□□ -0.14
SHC1-208ENST00000444179 SCNN1DP51172 638 aa14.15□□□□□ -0.14
SHC1-208ENST00000444179 TRIM28Q13263 835 aaKnown RBP14.15□□□□□ -0.14
SHC1-208ENST00000444179 EAPPQ56P03 285 aaPredicted RBP14.15□□□□□ -0.14
SHC1-208ENST00000444179 TSPYL6Q8N831 410 aa14.15□□□□□ -0.14
SHC1-208ENST00000444179 PPIP5K2O43314 1243 aa14.14□□□□□ -0.15
SHC1-208ENST00000444179 EPS15P42566 896 aa14.14□□□□□ -0.15
SHC1-208ENST00000444179 EIF6P56537 245 aaKnown RBP14.14□□□□□ -0.15
SHC1-208ENST00000444179 GRAPQ13588 217 aa14.14□□□□□ -0.15
SHC1-208ENST00000444179 RTL5Q5HYW3 569 aaPredicted RBP14.14□□□□□ -0.15
SHC1-208ENST00000444179 DDX46Q7L014 1031 aaKnown RBP14.14□□□□□ -0.15
SHC1-208ENST00000444179 GRAPLQ8TC17 118 aaPredicted RBP14.14□□□□□ -0.15
SHC1-208ENST00000444179 LTBP1Q14766 1721 aa14.14□□□□□ -0.15
SHC1-208ENST00000444179 LAMB2P55268 1798 aa14.14□□□□□ -0.15
SHC1-208ENST00000444179 ADAMTSL1Q8N6G6 1762 aa14.14□□□□□ -0.15
SHC1-208ENST00000444179 SCN4AP35499 1836 aa14.13□□□□□ -0.15
SHC1-208ENST00000444179 CALD1Q05682 793 aaKnown RBP14.13□□□□□ -0.15
SHC1-208ENST00000444179 SF3B3Q15393 1217 aaKnown RBP14.13□□□□□ -0.15
SHC1-208ENST00000444179 MAP1SQ66K74 1059 aaPredicted RBP14.13□□□□□ -0.15
SHC1-208ENST00000444179 DPP8Q6V1X1 898 aaPredicted RBP14.13□□□□□ -0.15
SHC1-208ENST00000444179 MPNDQ8N594 471 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms