RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 DLEC1Q9Y238 1755 aa20.46■□□□□ 0.87
USP39-205ENST00000442708 BCAR3O75815 825 aa20.45■□□□□ 0.86
USP39-205ENST00000442708 DPEP1P16444 411 aa20.45■□□□□ 0.86
USP39-205ENST00000442708 KCNA3P22001 575 aa20.45■□□□□ 0.86
USP39-205ENST00000442708 CHRNA5P30532 468 aa20.45■□□□□ 0.86
USP39-205ENST00000442708 PPP1R42Q7Z4L9 355 aa20.45■□□□□ 0.86
USP39-205ENST00000442708 UTP14AQ9BVJ6 771 aaKnown RBP20.45■□□□□ 0.86
USP39-205ENST00000442708 BRIP1Q9BX63 1249 aa20.45■□□□□ 0.86
USP39-205ENST00000442708 NYXQ9GZU5 481 aa20.45■□□□□ 0.86
USP39-205ENST00000442708 DDX60Q8IY21 1712 aaKnown RBP20.44■□□□□ 0.86
USP39-205ENST00000442708 LAMB2P55268 1798 aa20.44■□□□□ 0.86
USP39-205ENST00000442708 BRPF1P55201 1214 aaPredicted RBP20.44■□□□□ 0.86
USP39-205ENST00000442708 TGFB2P61812 414 aa20.44■□□□□ 0.86
USP39-205ENST00000442708 ST5P78524 1137 aa20.44■□□□□ 0.86
USP39-205ENST00000442708 CWF19L2Q2TBE0 894 aaKnown RBP20.44■□□□□ 0.86
USP39-205ENST00000442708 NPHP1O15259 732 aa20.43■□□□□ 0.86
USP39-205ENST00000442708 TRMT112Q9UI30 125 aaKnown RBP20.43■□□□□ 0.86
USP39-205ENST00000442708 WWC3Q9ULE0 1092 aa20.43■□□□□ 0.86
USP39-205ENST00000442708 NOB1Q9ULX3 412 aaKnown RBP20.43■□□□□ 0.86
USP39-205ENST00000442708 NEURL1BA8MQ27 555 aa20.42■□□□□ 0.86
USP39-205ENST00000442708 BEND3Q5T5X7 828 aa20.42■□□□□ 0.86
USP39-205ENST00000442708 C3orf67Q6ZVT6 689 aa20.42■□□□□ 0.86
USP39-205ENST00000442708 FAM89AQ96GI7 184 aa20.42■□□□□ 0.86
USP39-205ENST00000442708 PTPRCP08575 1304 aa20.42■□□□□ 0.86
USP39-205ENST00000442708 GTF2E1P29083 439 aaPredicted RBP20.41■□□□□ 0.86
USP39-205ENST00000442708 RTL5Q5HYW3 569 aaPredicted RBP20.41■□□□□ 0.86
USP39-205ENST00000442708 CCDC191Q8NCU4 936 aa20.41■□□□□ 0.86
USP39-205ENST00000442708 JARID2Q92833 1246 aaPredicted RBP20.41■□□□□ 0.86
USP39-205ENST00000442708 KLRG2A4D1S0 409 aaPredicted RBP20.4■□□□□ 0.86
USP39-205ENST00000442708 NEXNQ0ZGT2 675 aa20.4■□□□□ 0.86
USP39-205ENST00000442708 RIC1Q4ADV7 1423 aa20.4■□□□□ 0.86
USP39-205ENST00000442708 SLC10A5Q5PT55 438 aa20.4■□□□□ 0.86
USP39-205ENST00000442708 C2CD5Q86YS7 1000 aa20.4■□□□□ 0.86
USP39-205ENST00000442708 LINS1Q8NG48 757 aa20.4■□□□□ 0.86
USP39-205ENST00000442708 CWC25Q9NXE8 425 aaPredicted RBP20.4■□□□□ 0.86
USP39-205ENST00000442708 CACNA1SQ13698 1873 aa20.39■□□□□ 0.86
USP39-205ENST00000442708 RNF123Q5XPI4 1314 aa20.39■□□□□ 0.85
USP39-205ENST00000442708 SH3TC1Q8TE82 1336 aa20.39■□□□□ 0.85
USP39-205ENST00000442708 HCLS1P14317 486 aaPredicted RBP20.39■□□□□ 0.85
USP39-205ENST00000442708 PDE6BP35913 854 aa20.39■□□□□ 0.85
USP39-205ENST00000442708 SLC4A10Q6U841 1118 aa20.39■□□□□ 0.85
USP39-205ENST00000442708 TNNQ9UQP3 1299 aa20.39■□□□□ 0.85
USP39-205ENST00000442708 GCKRQ14397 625 aa20.38■□□□□ 0.85
USP39-205ENST00000442708 ZBTB38Q8NAP3 1195 aaPredicted RBP20.38■□□□□ 0.85
USP39-205ENST00000442708 PCCAP05165 728 aaPredicted RBP20.37■□□□□ 0.85
USP39-205ENST00000442708 SRGNP10124 158 aa20.37■□□□□ 0.85
USP39-205ENST00000442708 YBX3P16989 372 aaKnown RBP eCLIP20.37■□□□□ 0.85
USP39-205ENST00000442708 KIF16BQ96L93 1317 aa20.36■□□□□ 0.85
USP39-205ENST00000442708 H0YIN7 160 aa20.36■□□□□ 0.85
USP39-205ENST00000442708 H7C1W4 665 aa20.36■□□□□ 0.85
USP39-205ENST00000442708 CRY2Q49AN0 593 aa20.36■□□□□ 0.85
USP39-205ENST00000442708 TAF1P21675 1872 aa20.35■□□□□ 0.85
USP39-205ENST00000442708 SLX4Q8IY92 1834 aa20.35■□□□□ 0.85
USP39-205ENST00000442708 IRS4O14654 1257 aaPredicted RBP20.35■□□□□ 0.85
USP39-205ENST00000442708 CASP7P55210 303 aa20.35■□□□□ 0.85
USP39-205ENST00000442708 FRAT1Q92837 279 aaPredicted RBP20.35■□□□□ 0.85
USP39-205ENST00000442708 ARFGEF1Q9Y6D6 1849 aa20.34■□□□□ 0.85
USP39-205ENST00000442708 UBE3BQ7Z3V4 1068 aa20.34■□□□□ 0.85
USP39-205ENST00000442708 ARHGAP45Q92619 1136 aa20.34■□□□□ 0.85
USP39-205ENST00000442708 ZNF622Q969S3 477 aaKnown RBP eCLIP20.34■□□□□ 0.85
USP39-205ENST00000442708 SRCIN1Q9C0H9 1055 aa20.34■□□□□ 0.85
USP39-205ENST00000442708 PIM2Q9P1W9 311 aa20.34■□□□□ 0.85
USP39-205ENST00000442708 GOLGB1Q14789 3259 aaKnown RBP20.34■□□□□ 0.85
USP39-205ENST00000442708 COL4A1P02462 1669 aa20.33■□□□□ 0.85
USP39-205ENST00000442708 ALDH1L1O75891 902 aa20.33■□□□□ 0.85
USP39-205ENST00000442708 TRIM27P14373 513 aa20.33■□□□□ 0.85
USP39-205ENST00000442708 STYK1Q6J9G0 422 aa20.33■□□□□ 0.85
USP39-205ENST00000442708 PELP1Q8IZL8 1130 aaKnown RBP20.33■□□□□ 0.85
USP39-205ENST00000442708 MASTLQ96GX5 879 aa20.33■□□□□ 0.85
USP39-205ENST00000442708 API5Q9BZZ5 524 aaKnown RBP20.33■□□□□ 0.85
USP39-205ENST00000442708 RCAN3Q9UKA8 241 aa20.33■□□□□ 0.85
USP39-205ENST00000442708 PDZRN3Q9UPQ7 1066 aa20.33■□□□□ 0.85
USP39-205ENST00000442708 MYH3P11055 1940 aa20.33■□□□□ 0.84
USP39-205ENST00000442708 CDHR2Q9BYE9 1310 aa20.32■□□□□ 0.84
USP39-205ENST00000442708 NLRP3Q96P20 1036 aa20.32■□□□□ 0.84
USP39-205ENST00000442708 ABCC4O15439 1325 aa20.31■□□□□ 0.84
USP39-205ENST00000442708 NPR1P16066 1061 aa20.31■□□□□ 0.84
USP39-205ENST00000442708 GPR162Q16538 588 aa20.31■□□□□ 0.84
USP39-205ENST00000442708 ATF7IPQ6VMQ6 1270 aa20.31■□□□□ 0.84
USP39-205ENST00000442708 BCS1LQ9Y276 419 aa20.31■□□□□ 0.84
USP39-205ENST00000442708 IPO8O15397 1037 aaKnown RBP20.3■□□□□ 0.84
USP39-205ENST00000442708 HOXA10P31260 410 aaPredicted RBP20.3■□□□□ 0.84
USP39-205ENST00000442708 DALRD3Q5D0E6 543 aaKnown RBP20.3■□□□□ 0.84
USP39-205ENST00000442708 SLC51AQ86UW1 340 aa20.3■□□□□ 0.84
USP39-205ENST00000442708 TTLL6Q8N841 843 aa20.3■□□□□ 0.84
USP39-205ENST00000442708 GRM8O00222 908 aa20.29■□□□□ 0.84
USP39-205ENST00000442708 PDE8AO60658 829 aa20.29■□□□□ 0.84
USP39-205ENST00000442708 ZKSCAN2Q63HK3 967 aa20.29■□□□□ 0.84
USP39-205ENST00000442708 CLUAP1Q96AJ1 413 aa20.29■□□□□ 0.84
USP39-205ENST00000442708 CHD4Q14839 1912 aa20.28■□□□□ 0.84
USP39-205ENST00000442708 NBPF7P0C2Y1 421 aaPredicted RBP20.28■□□□□ 0.84
USP39-205ENST00000442708 SF3B3Q15393 1217 aaKnown RBP20.28■□□□□ 0.84
USP39-205ENST00000442708 PRPF40BQ6NWY9 871 aaKnown RBP20.28■□□□□ 0.84
USP39-205ENST00000442708 RPGRQ92834 1020 aaKnown RBP20.28■□□□□ 0.84
USP39-205ENST00000442708 USP44Q9H0E7 712 aa20.28■□□□□ 0.84
USP39-205ENST00000442708 UTYO14607 1347 aa20.27■□□□□ 0.84
USP39-205ENST00000442708 RLBP1P12271 317 aa20.27■□□□□ 0.84
USP39-205ENST00000442708 CCT4P50991 539 aaKnown RBP20.27■□□□□ 0.84
USP39-205ENST00000442708 INTS3Q68E01 1043 aaKnown RBP20.27■□□□□ 0.84
USP39-205ENST00000442708 CNKSR1Q969H4 720 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms