RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 AIMP1Q12904 312 aaKnown RBP15.35■□□□□ 0.05
TTC28-203ENST00000442232 GRIPAP1Q4V328 841 aa15.35■□□□□ 0.05
TTC28-203ENST00000442232 OLFM4Q6UX06 510 aa15.35■□□□□ 0.05
TTC28-203ENST00000442232 SYNE4Q8N205 404 aa15.35■□□□□ 0.05
TTC28-203ENST00000442232 JDP2Q8WYK2 163 aa15.35■□□□□ 0.05
TTC28-203ENST00000442232 NLRP3Q96P20 1036 aa15.35■□□□□ 0.05
TTC28-203ENST00000442232 UTP14AQ9BVJ6 771 aaKnown RBP15.35■□□□□ 0.05
TTC28-203ENST00000442232 POTECB2RU33 542 aa15.34■□□□□ 0.05
TTC28-203ENST00000442232 PPEF1O14829 653 aaPredicted RBP15.34■□□□□ 0.05
TTC28-203ENST00000442232 ANXA1P04083 346 aa15.34■□□□□ 0.05
TTC28-203ENST00000442232 HOXA10P31260 410 aaPredicted RBP15.34■□□□□ 0.05
TTC28-203ENST00000442232 PDIA6Q15084 440 aa15.34■□□□□ 0.05
TTC28-203ENST00000442232 CHADLQ6NUI6 762 aa15.34■□□□□ 0.05
TTC28-203ENST00000442232 PSMD1Q99460 953 aa15.34■□□□□ 0.05
TTC28-203ENST00000442232 CHL1O00533 1208 aa15.33■□□□□ 0.04
TTC28-203ENST00000442232 PROSER3Q2NL68 480 aa15.33■□□□□ 0.04
TTC28-203ENST00000442232 HDGFL1Q5TGJ6 251 aa15.33■□□□□ 0.04
TTC28-203ENST00000442232 COPS6Q7L5N1 327 aa15.33■□□□□ 0.04
TTC28-203ENST00000442232 XAGE3Q8WTP9 111 aa15.33■□□□□ 0.04
TTC28-203ENST00000442232 L3MBTL3Q96JM7 780 aaPredicted RBP15.33■□□□□ 0.04
TTC28-203ENST00000442232 CRAMP1Q96RY5 1269 aa15.33■□□□□ 0.04
TTC28-203ENST00000442232 PRKRIP1Q9H875 184 aaPredicted RBP15.33■□□□□ 0.04
TTC28-203ENST00000442232 DDX21Q9NR30 783 aaKnown RBP eCLIP15.33■□□□□ 0.04
TTC28-203ENST00000442232 ADAMTS8Q9UP79 889 aa15.33■□□□□ 0.04
TTC28-203ENST00000442232 LAMB2P55268 1798 aa15.32■□□□□ 0.04
TTC28-203ENST00000442232 HOXB7P09629 217 aa15.32■□□□□ 0.04
TTC28-203ENST00000442232 EIF6P56537 245 aaKnown RBP15.32■□□□□ 0.04
TTC28-203ENST00000442232 CALD1Q05682 793 aaKnown RBP15.32■□□□□ 0.04
TTC28-203ENST00000442232 IFFO2Q5TF58 517 aa15.32■□□□□ 0.04
TTC28-203ENST00000442232 LRP10Q7Z4F1 713 aa15.32■□□□□ 0.04
TTC28-203ENST00000442232 HACL1Q9UJ83 578 aa15.32■□□□□ 0.04
TTC28-203ENST00000442232 TRIM35Q9UPQ4 493 aa15.32■□□□□ 0.04
TTC28-203ENST00000442232 ZNF541Q9H0D2 1346 aa15.32■□□□□ 0.04
TTC28-203ENST00000442232 TCERG1O14776 1098 aaKnown RBP15.31■□□□□ 0.04
TTC28-203ENST00000442232 EAPPQ56P03 285 aaPredicted RBP15.31■□□□□ 0.04
TTC28-203ENST00000442232 LDHDQ86WU2 507 aa15.31■□□□□ 0.04
TTC28-203ENST00000442232 LARGE2Q8N3Y3 721 aa15.31■□□□□ 0.04
TTC28-203ENST00000442232 CHPF2Q9P2E5 772 aa15.31■□□□□ 0.04
TTC28-203ENST00000442232 GPC2Q8N158 579 aa15.3■□□□□ 0.04
TTC28-203ENST00000442232 JMYQ8N9B5 988 aa15.3■□□□□ 0.04
TTC28-203ENST00000442232 CFAP44Q96MT7 982 aa15.3■□□□□ 0.04
TTC28-203ENST00000442232 TAF1DQ9H5J8 278 aaPredicted RBP15.3■□□□□ 0.04
TTC28-203ENST00000442232 TRMT112Q9UI30 125 aaKnown RBP15.3■□□□□ 0.04
TTC28-203ENST00000442232 CLEC11AQ9Y240 323 aa15.3■□□□□ 0.04
TTC28-203ENST00000442232 SH3TC1Q8TE82 1336 aa15.29■□□□□ 0.04
TTC28-203ENST00000442232 FZD9O00144 591 aa15.29■□□□□ 0.04
TTC28-203ENST00000442232 LMOD1P29536 600 aaPredicted RBP15.29■□□□□ 0.04
TTC28-203ENST00000442232 KRT24Q2M2I5 525 aa15.29■□□□□ 0.04
TTC28-203ENST00000442232 NLRP10Q86W26 655 aa15.29■□□□□ 0.04
TTC28-203ENST00000442232 NIM1KQ8IY84 436 aa15.29■□□□□ 0.04
TTC28-203ENST00000442232 DBF4Q9UBU7 674 aaPredicted RBP15.29■□□□□ 0.04
TTC28-203ENST00000442232 SNED1Q8TER0 1413 aa15.28■□□□□ 0.04
TTC28-203ENST00000442232 ABCC4O15439 1325 aa15.28■□□□□ 0.04
TTC28-203ENST00000442232 POTEIP0CG38 1075 aa15.28■□□□□ 0.04
TTC28-203ENST00000442232 POTEJP0CG39 1038 aa15.28■□□□□ 0.04
TTC28-203ENST00000442232 EPHX2P34913 555 aa15.28■□□□□ 0.04
TTC28-203ENST00000442232 TCIRG1Q13488 830 aa15.28■□□□□ 0.04
TTC28-203ENST00000442232 SLC10A5Q5PT55 438 aa15.28■□□□□ 0.04
TTC28-203ENST00000442232 C3orf67Q6ZVT6 689 aa15.28■□□□□ 0.04
TTC28-203ENST00000442232 DDX46Q7L014 1031 aaKnown RBP15.28■□□□□ 0.04
TTC28-203ENST00000442232 PNMA8AQ86V59 439 aaPredicted RBP15.28■□□□□ 0.04
TTC28-203ENST00000442232 SUPT20HQ8NEM7 779 aa15.28■□□□□ 0.04
TTC28-203ENST00000442232 CREBZFQ9NS37 354 aa15.28■□□□□ 0.04
TTC28-203ENST00000442232 HYPKQ9NX55 129 aa15.28■□□□□ 0.04
TTC28-203ENST00000442232 GJA3Q9Y6H8 435 aa15.28■□□□□ 0.04
TTC28-203ENST00000442232 PPIP5K2O43314 1243 aa15.27■□□□□ 0.04
TTC28-203ENST00000442232 GNAI1P63096 354 aa15.27■□□□□ 0.04
TTC28-203ENST00000442232 PLBD2Q8NHP8 589 aa15.27■□□□□ 0.04
TTC28-203ENST00000442232 IFT57Q9NWB7 429 aa15.27■□□□□ 0.04
TTC28-203ENST00000442232 ATP6V0A2Q9Y487 856 aa15.27■□□□□ 0.04
TTC28-203ENST00000442232 BBOX1O75936 387 aa15.26■□□□□ 0.03
TTC28-203ENST00000442232 HCLS1P14317 486 aaPredicted RBP15.26■□□□□ 0.03
TTC28-203ENST00000442232 GOLGA2Q08379 1002 aa15.26■□□□□ 0.03
TTC28-203ENST00000442232 DUSP27Q5VZP5 1158 aa15.26■□□□□ 0.03
TTC28-203ENST00000442232 ANKRD13DQ6ZTN6 518 aa15.26■□□□□ 0.03
TTC28-203ENST00000442232 CHMP4AQ9BY43 222 aa15.26■□□□□ 0.03
TTC28-203ENST00000442232 MBIPQ9NS73 344 aa15.26■□□□□ 0.03
TTC28-203ENST00000442232 DDX60Q8IY21 1712 aaKnown RBP15.26■□□□□ 0.03
TTC28-203ENST00000442232 APAF1O14727 1248 aa15.25■□□□□ 0.03
TTC28-203ENST00000442232 DPP8Q6V1X1 898 aaPredicted RBP15.25■□□□□ 0.03
TTC28-203ENST00000442232 VPS33BQ9H267 617 aa15.25■□□□□ 0.03
TTC28-203ENST00000442232 ADAMTSL1Q8N6G6 1762 aa15.24■□□□□ 0.03
TTC28-203ENST00000442232 GRAPQ13588 217 aa15.24■□□□□ 0.03
TTC28-203ENST00000442232 AOC3Q16853 763 aa15.24■□□□□ 0.03
TTC28-203ENST00000442232 TMC4Q7Z404 712 aa15.24■□□□□ 0.03
TTC28-203ENST00000442232 GRAPLQ8TC17 118 aaPredicted RBP15.24■□□□□ 0.03
TTC28-203ENST00000442232 COL4A5P29400 1685 aa15.23■□□□□ 0.03
TTC28-203ENST00000442232 HSP90B1P14625 803 aaKnown RBP15.23■□□□□ 0.03
TTC28-203ENST00000442232 RIC3Q7Z5B4 369 aa15.23■□□□□ 0.03
TTC28-203ENST00000442232 SP8Q8IXZ3 490 aa15.23■□□□□ 0.03
TTC28-203ENST00000442232 MPNDQ8N594 471 aa15.23■□□□□ 0.03
TTC28-203ENST00000442232 MKRN1Q9UHC7 482 aaKnown RBP15.23■□□□□ 0.03
TTC28-203ENST00000442232 TAF1P21675 1872 aa15.23■□□□□ 0.03
TTC28-203ENST00000442232 TMEM88BA6NKF7 163 aa15.22■□□□□ 0.03
TTC28-203ENST00000442232 LRRC37AA6NMS7 1700 aa15.22■□□□□ 0.03
TTC28-203ENST00000442232 PASKQ96RG2 1323 aa15.21■□□□□ 0.03
TTC28-203ENST00000442232 ATP5J2-PTCD1G3V325 749 aa15.21■□□□□ 0.03
TTC28-203ENST00000442232 ZNF853P0CG23 659 aa15.21■□□□□ 0.03
TTC28-203ENST00000442232 HSPA1AP0DMV8 641 aaKnown RBP15.21■□□□□ 0.03
TTC28-203ENST00000442232 HSPA1BP0DMV9 641 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms