RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 PCDHB3Q9Y5E6 796 aa7.4□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 COMMD10Q9Y6G5 202 aa7.4□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 PPP1R12BO60237 982 aaPredicted RBP7.39□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 MZF1P28698 734 aaPredicted RBP7.39□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 MMP16P51512 607 aa7.39□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 NBPF6Q5VWK0 638 aa7.39□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 ATCAYQ86WG3 371 aa7.39□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 GJD3Q8N144 294 aa7.39□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 NBPF4Q96M43 638 aa7.39□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 A0A1W2PRU2 124 aa7.39□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 ARHGAP33O14559 1287 aa7.39□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 CFHR5Q9BXR6 569 aa7.39□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.39□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 GABBR1Q9UBS5 961 aa7.39□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 ENPP3O14638 875 aa7.38□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 ZBTB39O15060 712 aa7.38□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 DNAJC6O75061 913 aa7.38□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 PAK2Q13177 524 aa7.38□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 CCDC24Q8N4L8 307 aa7.38□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 CSRNP1Q96S65 589 aa7.38□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 SPC25Q9HBM1 224 aa7.38□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 NEUROD4Q9HD90 331 aa7.38□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 CHPF2Q9P2E5 772 aa7.38□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 EPB41L2O43491 1005 aaKnown RBP7.37□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 ZRANB2O95218 330 aaKnown RBP eCLIP7.37□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 GTF2E1P29083 439 aaPredicted RBP7.37□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 RAB15P59190 212 aa7.37□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 DNM1Q05193 864 aaKnown RBP7.37□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 CACTIN-AS1Q8N1I8 211 aa7.37□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 FAM160A2Q8N612 972 aaPredicted RBP7.37□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 GPRASP2Q96D09 838 aa7.37□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 SPSB2Q99619 263 aa7.37□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 TMX4Q9H1E5 349 aaPredicted RBP7.37□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 JADE2Q9NQC1 790 aa7.37□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 POLD1P28340 1107 aa7.37□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 GDF10P55107 478 aa7.37□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 CCDC96Q2M329 555 aa7.37□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 ZNF280DQ6N043 979 aa7.37□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 MKL1Q969V6 931 aa7.37□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 CDV3Q9UKY7 258 aaKnown RBP7.37□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 VPS9D1Q9Y2B5 631 aa7.37□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 PPP1R12AO14974 1030 aaPredicted RBP7.36□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 ZNF500O60304 480 aaPredicted RBP7.36□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 SSBP05455 408 aaKnown RBP eCLIP7.36□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 HOXB1P14653 301 aaPredicted RBP7.36□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 PTCRAQ6ISU1 281 aaPredicted RBP7.36□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 MAMSTRQ6ZN01 415 aa7.36□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 ARMCX6Q7L4S7 300 aa7.36□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 SRPK1Q96SB4 655 aaKnown RBP7.36□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 PRDM9Q9NQV7 894 aa7.36□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 GNL3LQ9NVN8 582 aaKnown RBP7.36□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 SERTAD1Q9UHV2 236 aa7.36□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 SCTRP47872 440 aa7.36□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 EPHA4P54764 986 aa7.36□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 C4orf46Q504U0 113 aa7.36□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 CCAR1Q8IX12 1150 aaKnown RBP7.36□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 PNISRQ8TF01 805 aaKnown RBP7.36□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 C2orf49Q9BVC5 232 aaPredicted RBP7.36□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 LRFN2Q9ULH4 789 aa7.36□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 WASLO00401 505 aaPredicted RBP7.35□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 GOLIM4O00461 696 aa7.35□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 EIF1AYO14602 144 aaKnown RBP7.35□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 SCNN1DP51172 638 aa7.35□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 PPP4CP60510 307 aa7.35□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 SERINC3Q13530 473 aa7.35□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 DMRTA1Q5VZB9 504 aa7.35□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 AMOTL1Q8IY63 956 aa7.35□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 V9GY48 417 aaPredicted RBP7.35□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 USP31Q70CQ4 1352 aa7.35□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 CUX2O14529 1486 aa7.34□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 ORC1Q13415 861 aa7.34□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 CCDC146Q8IYE0 955 aa7.34□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 STAG2Q8N3U4 1231 aa7.34□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.34□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 BAP1Q92560 729 aa7.34□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 FOXJ1Q92949 421 aa7.34□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 IRF2BPLQ9H1B7 796 aa7.34□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 QTRT2Q9H974 415 aaKnown RBP7.34□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 WASHC2CQ9Y4E1 1318 aa7.34□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 INHAP05111 366 aa7.34□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 MMP14P50281 582 aa7.34□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 TAF1CQ15572 869 aaPredicted RBP7.34□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 PLEKHG6Q3KR16 790 aa7.34□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 C4orf48Q5BLP8 95 aa7.34□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 EDEM1Q92611 657 aa7.34□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 SLKQ9H2G2 1235 aaPredicted RBP7.34□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 FRMD4BQ9Y2L6 1034 aa7.34□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 PRKAB1Q9Y478 270 aa7.34□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 NUB1Q9Y5A7 615 aa7.34□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 WASHC2AQ641Q2 1341 aa7.33□□□□□ -1.24
ALMS1-IT1-201ENST00000441587 STAU1O95793 577 aaKnown RBP7.33□□□□□ -1.24
ALMS1-IT1-201ENST00000441587 PCSK2P16519 638 aa7.33□□□□□ -1.24
ALMS1-IT1-201ENST00000441587 TBCELQ5QJ74 424 aa7.33□□□□□ -1.24
ALMS1-IT1-201ENST00000441587 C11orf96Q7Z7L8 435 aa7.33□□□□□ -1.24
ALMS1-IT1-201ENST00000441587 NKX2-3Q8TAU0 364 aa7.33□□□□□ -1.24
ALMS1-IT1-201ENST00000441587 ANP32BQ92688 251 aaKnown RBP7.33□□□□□ -1.24
ALMS1-IT1-201ENST00000441587 RNPC3Q96LT9 517 aaKnown RBP7.33□□□□□ -1.24
ALMS1-IT1-201ENST00000441587 TSPAN18Q96SJ8 248 aa7.33□□□□□ -1.24
ALMS1-IT1-201ENST00000441587 TRIM55Q9BYV6 548 aa7.33□□□□□ -1.24
ALMS1-IT1-201ENST00000441587 SIRPGQ9P1W8 387 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms