RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 RBM17Q96I25 401 aaKnown RBP7.88□□□□□ -1.15
PTPRR-204ENST00000440835 CCDC136Q96JN2 1154 aa7.88□□□□□ -1.15
PTPRR-204ENST00000440835 ZNF330Q9Y3S2 320 aaPredicted RBP7.88□□□□□ -1.15
PTPRR-204ENST00000440835 TRPM7Q96QT4 1865 aa7.88□□□□□ -1.15
PTPRR-204ENST00000440835 NBPF26B4DH59 902 aa7.88□□□□□ -1.15
PTPRR-204ENST00000440835 LMOD3Q0VAK6 560 aa7.88□□□□□ -1.15
PTPRR-204ENST00000440835 NBPF10Q6P3W6 841 aaKnown RBP7.88□□□□□ -1.15
PTPRR-204ENST00000440835 TMC4Q7Z404 712 aa7.88□□□□□ -1.15
PTPRR-204ENST00000440835 NBPF15Q8N660 670 aa7.88□□□□□ -1.15
PTPRR-204ENST00000440835 JDP2Q8WYK2 163 aa7.88□□□□□ -1.15
PTPRR-204ENST00000440835 TMX4Q9H1E5 349 aaPredicted RBP7.88□□□□□ -1.15
PTPRR-204ENST00000440835 KCNQ3O43525 872 aa7.88□□□□□ -1.15
PTPRR-204ENST00000440835 NEFLP07196 543 aa7.88□□□□□ -1.15
PTPRR-204ENST00000440835 GTF2E1P29083 439 aaPredicted RBP7.88□□□□□ -1.15
PTPRR-204ENST00000440835 CTCFP49711 727 aaPredicted RBP7.88□□□□□ -1.15
PTPRR-204ENST00000440835 EIF6P56537 245 aaKnown RBP7.88□□□□□ -1.15
PTPRR-204ENST00000440835 NFE2L2Q16236 605 aa7.88□□□□□ -1.15
PTPRR-204ENST00000440835 PPP1R42Q7Z4L9 355 aa7.88□□□□□ -1.15
PTPRR-204ENST00000440835 AIDAQ96BJ3 306 aa7.88□□□□□ -1.15
PTPRR-204ENST00000440835 DDNO94850 711 aaPredicted RBP7.87□□□□□ -1.15
PTPRR-204ENST00000440835 HSP90AB3PQ58FF7 597 aa7.87□□□□□ -1.15
PTPRR-204ENST00000440835 SLC10A5Q5PT55 438 aa7.87□□□□□ -1.15
PTPRR-204ENST00000440835 COL13A1Q5TAT6 717 aaPredicted RBP7.87□□□□□ -1.15
PTPRR-204ENST00000440835 SYNE4Q8N205 404 aa7.87□□□□□ -1.15
PTPRR-204ENST00000440835 RASSF10A6NK89 507 aa7.87□□□□□ -1.15
PTPRR-204ENST00000440835 ITGBL1O95965 494 aaPredicted RBP7.87□□□□□ -1.15
PTPRR-204ENST00000440835 EPHX2P34913 555 aa7.87□□□□□ -1.15
PTPRR-204ENST00000440835 USP50Q70EL3 339 aaPredicted RBP7.87□□□□□ -1.15
PTPRR-204ENST00000440835 RPGRQ92834 1020 aaKnown RBP7.87□□□□□ -1.15
PTPRR-204ENST00000440835 LMOD1P29536 600 aaPredicted RBP7.86□□□□□ -1.15
PTPRR-204ENST00000440835 EIF4A1P60842 406 aaKnown RBP7.86□□□□□ -1.15
PTPRR-204ENST00000440835 MCM10Q7L590 875 aa7.86□□□□□ -1.15
PTPRR-204ENST00000440835 ZNF34Q8IZ26 560 aa7.86□□□□□ -1.15
PTPRR-204ENST00000440835 MAP2K1Q02750 393 aaPredicted RBP7.86□□□□□ -1.15
PTPRR-204ENST00000440835 GIGYF2Q6Y7W6 1299 aaKnown RBP7.86□□□□□ -1.15
PTPRR-204ENST00000440835 PLEKHF1Q96S99 279 aa7.86□□□□□ -1.15
PTPRR-204ENST00000440835 MAPK8IP3Q9UPT6 1336 aa7.86□□□□□ -1.15
PTPRR-204ENST00000440835 DDX60Q8IY21 1712 aaKnown RBP7.86□□□□□ -1.15
PTPRR-204ENST00000440835 ECE1P42892 770 aa7.85□□□□□ -1.15
PTPRR-204ENST00000440835 HTRA3P83110 453 aa7.85□□□□□ -1.15
PTPRR-204ENST00000440835 HHIPL1Q96JK4 782 aa7.85□□□□□ -1.15
PTPRR-204ENST00000440835 RTFDC1Q9BY42 306 aaPredicted RBP7.85□□□□□ -1.15
PTPRR-204ENST00000440835 FANCIQ9NVI1 1328 aa7.85□□□□□ -1.15
PTPRR-204ENST00000440835 BBOX1O75936 387 aa7.85□□□□□ -1.15
PTPRR-204ENST00000440835 RALBP1Q15311 655 aa7.85□□□□□ -1.15
PTPRR-204ENST00000440835 ZNF219Q9P2Y4 722 aaPredicted RBP7.85□□□□□ -1.15
PTPRR-204ENST00000440835 HOXB7P09629 217 aa7.84□□□□□ -1.15
PTPRR-204ENST00000440835 CHMP4AQ9BY43 222 aa7.84□□□□□ -1.15
PTPRR-204ENST00000440835 ZNF541Q9H0D2 1346 aa7.84□□□□□ -1.15
PTPRR-204ENST00000440835 CA12O43570 354 aa7.84□□□□□ -1.15
PTPRR-204ENST00000440835 HLFQ16534 295 aa7.84□□□□□ -1.15
PTPRR-204ENST00000440835 CNTROBQ8N137 903 aa7.84□□□□□ -1.15
PTPRR-204ENST00000440835 ZC3H15Q8WU90 426 aaKnown RBP7.84□□□□□ -1.15
PTPRR-204ENST00000440835 NLRP3Q96P20 1036 aa7.84□□□□□ -1.15
PTPRR-204ENST00000440835 ZNF277Q9NRM2 450 aaPredicted RBP7.84□□□□□ -1.15
PTPRR-204ENST00000440835 WBP1LQ9NX94 342 aa7.84□□□□□ -1.15
PTPRR-204ENST00000440835 LRRC37AA6NMS7 1700 aa7.84□□□□□ -1.15
PTPRR-204ENST00000440835 LAMB2P55268 1798 aa7.84□□□□□ -1.16
PTPRR-204ENST00000440835 PPEF1O14829 653 aaPredicted RBP7.84□□□□□ -1.16
PTPRR-204ENST00000440835 NTSR2O95665 410 aa7.84□□□□□ -1.16
PTPRR-204ENST00000440835 HSP90B1P14625 803 aaKnown RBP7.84□□□□□ -1.16
PTPRR-204ENST00000440835 DEFB115Q30KQ5 88 aa7.84□□□□□ -1.16
PTPRR-204ENST00000440835 NIM1KQ8IY84 436 aa7.84□□□□□ -1.16
PTPRR-204ENST00000440835 ATP6V0A2Q9Y487 856 aa7.84□□□□□ -1.16
PTPRR-204ENST00000440835 PRAMEF22A3QJZ6 481 aa7.83□□□□□ -1.16
PTPRR-204ENST00000440835 SP8Q8IXZ3 490 aa7.83□□□□□ -1.16
PTPRR-204ENST00000440835 UTP14AQ9BVJ6 771 aaKnown RBP7.83□□□□□ -1.16
PTPRR-204ENST00000440835 ABCC12Q96J65 1359 aa7.83□□□□□ -1.16
PTPRR-204ENST00000440835 CCDC24Q8N4L8 307 aa7.83□□□□□ -1.16
PTPRR-204ENST00000440835 ADARB2Q9NS39 739 aaKnown RBP7.83□□□□□ -1.16
PTPRR-204ENST00000440835 PGAP2Q9UHJ9 254 aa7.83□□□□□ -1.16
PTPRR-204ENST00000440835 CLEC11AQ9Y240 323 aa7.83□□□□□ -1.16
PTPRR-204ENST00000440835 GOLGB1Q14789 3259 aaKnown RBP7.82□□□□□ -1.16
PTPRR-204ENST00000440835 MAP2K2P36507 400 aa7.82□□□□□ -1.16
PTPRR-204ENST00000440835 VEGFBP49765 207 aa7.82□□□□□ -1.16
PTPRR-204ENST00000440835 TNIP1Q15025 636 aa7.82□□□□□ -1.16
PTPRR-204ENST00000440835 EAPPQ56P03 285 aaPredicted RBP7.82□□□□□ -1.16
PTPRR-204ENST00000440835 LARGE2Q8N3Y3 721 aa7.82□□□□□ -1.16
PTPRR-204ENST00000440835 DDX21Q9NR30 783 aaKnown RBP eCLIP7.82□□□□□ -1.16
PTPRR-204ENST00000440835 MKRN1Q9UHC7 482 aaKnown RBP7.82□□□□□ -1.16
PTPRR-204ENST00000440835 ZNRF3Q9ULT6 936 aa7.82□□□□□ -1.16
PTPRR-204ENST00000440835 LTBP1Q14766 1721 aa7.82□□□□□ -1.16
PTPRR-204ENST00000440835 CEP350Q5VT06 3117 aa7.81□□□□□ -1.16
PTPRR-204ENST00000440835 UBN2Q6ZU65 1347 aa7.81□□□□□ -1.16
PTPRR-204ENST00000440835 WDR33Q9C0J8 1336 aaKnown RBP7.81□□□□□ -1.16
PTPRR-204ENST00000440835 DCTN1Q14203 1278 aa7.81□□□□□ -1.16
PTPRR-204ENST00000440835 SUSD4Q5VX71 490 aa7.81□□□□□ -1.16
PTPRR-204ENST00000440835 NECTIN2Q92692 538 aa7.81□□□□□ -1.16
PTPRR-204ENST00000440835 TSPYL4Q9UJ04 414 aa7.81□□□□□ -1.16
PTPRR-204ENST00000440835 ZNF609O15014 1411 aa7.81□□□□□ -1.16
PTPRR-204ENST00000440835 FOXN1O15353 648 aa7.81□□□□□ -1.16
PTPRR-204ENST00000440835 LRP10Q7Z4F1 713 aa7.81□□□□□ -1.16
PTPRR-204ENST00000440835 PKNOX2Q96KN3 472 aa7.81□□□□□ -1.16
PTPRR-204ENST00000440835 RRP7AQ9Y3A4 280 aaKnown RBP7.81□□□□□ -1.16
PTPRR-204ENST00000440835 TLL2Q9Y6L7 1015 aa7.81□□□□□ -1.16
PTPRR-204ENST00000440835 POTEIP0CG38 1075 aa7.8□□□□□ -1.16
PTPRR-204ENST00000440835 POTEJP0CG39 1038 aa7.8□□□□□ -1.16
PTPRR-204ENST00000440835 PIP4K2AP48426 406 aaPredicted RBP7.8□□□□□ -1.16
PTPRR-204ENST00000440835 ERICH6BQ5W0A0 696 aa7.8□□□□□ -1.16
PTPRR-204ENST00000440835 TTLL7Q6ZT98 887 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms