RNA–Protein interactions for RNA: ENST00000437690.1

CHCHD4P4-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 4, humanhuman

BASIC

Gene CHCHD4P4, Length 327 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P4-201ENST00000437690 ANKRD13DQ6ZTN6 518 aa15.27■□□□□ 0.04
CHCHD4P4-201ENST00000437690 ISCA1Q9BUE6 129 aa15.27■□□□□ 0.04
CHCHD4P4-201ENST00000437690 FER1L6Q2WGJ9 1857 aa15.27■□□□□ 0.03
CHCHD4P4-201ENST00000437690 SNED1Q8TER0 1413 aa15.26■□□□□ 0.03
CHCHD4P4-201ENST00000437690 HSP90AB3PQ58FF7 597 aa15.26■□□□□ 0.03
CHCHD4P4-201ENST00000437690 SYNE4Q8N205 404 aa15.26■□□□□ 0.03
CHCHD4P4-201ENST00000437690 CACNA1SQ13698 1873 aa15.25■□□□□ 0.03
CHCHD4P4-201ENST00000437690 GTF2E1P29083 439 aaPredicted RBP15.25■□□□□ 0.03
CHCHD4P4-201ENST00000437690 HOXA10P31260 410 aaPredicted RBP15.25■□□□□ 0.03
CHCHD4P4-201ENST00000437690 PPP1R42Q7Z4L9 355 aa15.25■□□□□ 0.03
CHCHD4P4-201ENST00000437690 UTP14AQ9BVJ6 771 aaKnown RBP15.25■□□□□ 0.03
CHCHD4P4-201ENST00000437690 RNF123Q5XPI4 1314 aa15.24■□□□□ 0.03
CHCHD4P4-201ENST00000437690 TWISTNBQ3B726 338 aaPredicted RBP15.24■□□□□ 0.03
CHCHD4P4-201ENST00000437690 CCDC30Q5VVM6 783 aa15.24■□□□□ 0.03
CHCHD4P4-201ENST00000437690 OLFM4Q6UX06 510 aa15.24■□□□□ 0.03
CHCHD4P4-201ENST00000437690 RNF181Q9P0P0 153 aa15.24■□□□□ 0.03
CHCHD4P4-201ENST00000437690 ZNF219Q9P2Y4 722 aaPredicted RBP15.24■□□□□ 0.03
CHCHD4P4-201ENST00000437690 LTBP3Q9NS15 1303 aa15.23■□□□□ 0.03
CHCHD4P4-201ENST00000437690 LMNB1P20700 586 aa15.23■□□□□ 0.03
CHCHD4P4-201ENST00000437690 TRIM28Q13263 835 aaKnown RBP15.23■□□□□ 0.03
CHCHD4P4-201ENST00000437690 SLC51AQ86UW1 340 aa15.23■□□□□ 0.03
CHCHD4P4-201ENST00000437690 ATP5J2-PTCD1G3V325 749 aa15.22■□□□□ 0.03
CHCHD4P4-201ENST00000437690 CCER2I3L3R5 266 aa15.22■□□□□ 0.03
CHCHD4P4-201ENST00000437690 TCERG1O14776 1098 aaKnown RBP15.22■□□□□ 0.03
CHCHD4P4-201ENST00000437690 VAMP4O75379 141 aa15.22■□□□□ 0.03
CHCHD4P4-201ENST00000437690 ALDH1B1P30837 517 aa15.22■□□□□ 0.03
CHCHD4P4-201ENST00000437690 G2E3Q7L622 706 aa15.22■□□□□ 0.03
CHCHD4P4-201ENST00000437690 ZNF526Q8TF50 670 aaPredicted RBP15.22■□□□□ 0.03
CHCHD4P4-201ENST00000437690 ZNF428Q96B54 188 aa15.22■□□□□ 0.03
CHCHD4P4-201ENST00000437690 GPBP1L1Q9HC44 474 aaPredicted RBP15.22■□□□□ 0.03
CHCHD4P4-201ENST00000437690 LAMB2P55268 1798 aa15.21■□□□□ 0.03
CHCHD4P4-201ENST00000437690 KIF3CO14782 793 aa15.21■□□□□ 0.03
CHCHD4P4-201ENST00000437690 HCLS1P14317 486 aaPredicted RBP15.21■□□□□ 0.03
CHCHD4P4-201ENST00000437690 EXOSC9Q06265 439 aaKnown RBP15.21■□□□□ 0.03
CHCHD4P4-201ENST00000437690 TRMT112Q9UI30 125 aaKnown RBP15.21■□□□□ 0.03
CHCHD4P4-201ENST00000437690 DDX60Q8IY21 1712 aaKnown RBP15.2■□□□□ 0.02
CHCHD4P4-201ENST00000437690 C1QTNF8P60827 252 aa15.2■□□□□ 0.02
CHCHD4P4-201ENST00000437690 GOLGA2Q08379 1002 aa15.2■□□□□ 0.02
CHCHD4P4-201ENST00000437690 RIC3Q7Z5B4 369 aa15.2■□□□□ 0.02
CHCHD4P4-201ENST00000437690 CRAMP1Q96RY5 1269 aa15.2■□□□□ 0.02
CHCHD4P4-201ENST00000437690 CHMP4AQ9BY43 222 aa15.2■□□□□ 0.02
CHCHD4P4-201ENST00000437690 CCDC88AQ3V6T2 1871 aa15.2■□□□□ 0.02
CHCHD4P4-201ENST00000437690 TIAM2Q8IVF5 1701 aa15.2■□□□□ 0.02
CHCHD4P4-201ENST00000437690 SH3TC1Q8TE82 1336 aa15.19■□□□□ 0.02
CHCHD4P4-201ENST00000437690 ZC3H4Q9UPT8 1303 aaKnown RBP15.19■□□□□ 0.02
CHCHD4P4-201ENST00000437690 CCDC93Q567U6 631 aa15.19■□□□□ 0.02
CHCHD4P4-201ENST00000437690 SOGA3Q5TF21 947 aa15.19■□□□□ 0.02
CHCHD4P4-201ENST00000437690 FAM89AQ96GI7 184 aa15.19■□□□□ 0.02
CHCHD4P4-201ENST00000437690 NLRP3Q96P20 1036 aa15.19■□□□□ 0.02
CHCHD4P4-201ENST00000437690 METTL22Q9BUU2 404 aaPredicted RBP15.19■□□□□ 0.02
CHCHD4P4-201ENST00000437690 TAOK3Q9H2K8 898 aa15.19■□□□□ 0.02
CHCHD4P4-201ENST00000437690 ABCC4O15439 1325 aa15.18■□□□□ 0.02
CHCHD4P4-201ENST00000437690 CEP350Q5VT06 3117 aa15.18■□□□□ 0.02
CHCHD4P4-201ENST00000437690 DICER1Q9UPY3 1922 aaKnown RBP15.18■□□□□ 0.02
CHCHD4P4-201ENST00000437690 PI4KAP2A4QPH2 592 aa15.18■□□□□ 0.02
CHCHD4P4-201ENST00000437690 KSR2Q6VAB6 950 aa15.18■□□□□ 0.02
CHCHD4P4-201ENST00000437690 PI4KAP1Q8N8J0 262 aa15.18■□□□□ 0.02
CHCHD4P4-201ENST00000437690 RPGRQ92834 1020 aaKnown RBP15.18■□□□□ 0.02
CHCHD4P4-201ENST00000437690 MYD88Q99836 296 aa15.18■□□□□ 0.02
CHCHD4P4-201ENST00000437690 NMRK2Q9NPI5 230 aa15.18■□□□□ 0.02
CHCHD4P4-201ENST00000437690 COL4A1P02462 1669 aa15.18■□□□□ 0.02
CHCHD4P4-201ENST00000437690 SLC4A2P04920 1241 aa15.17■□□□□ 0.02
CHCHD4P4-201ENST00000437690 IGKV5-2P06315 115 aa15.17■□□□□ 0.02
CHCHD4P4-201ENST00000437690 FKBP4Q02790 459 aaKnown RBP eCLIP15.17■□□□□ 0.02
CHCHD4P4-201ENST00000437690 RBM17Q96I25 401 aaKnown RBP15.17■□□□□ 0.02
CHCHD4P4-201ENST00000437690 STK31Q9BXU1 1019 aa15.17■□□□□ 0.02
CHCHD4P4-201ENST00000437690 MYH16Q9H6N6 1097 aa15.17■□□□□ 0.02
CHCHD4P4-201ENST00000437690 MAP3K2Q9Y2U5 619 aa15.17■□□□□ 0.02
CHCHD4P4-201ENST00000437690 ZBTB38Q8NAP3 1195 aaPredicted RBP15.16■□□□□ 0.02
CHCHD4P4-201ENST00000437690 CCDC191Q8NCU4 936 aa15.16■□□□□ 0.02
CHCHD4P4-201ENST00000437690 PPEF1O14829 653 aaPredicted RBP15.15■□□□□ 0.02
CHCHD4P4-201ENST00000437690 DDX58O95786 925 aaKnown RBP15.15■□□□□ 0.02
CHCHD4P4-201ENST00000437690 FLIIQ13045 1269 aa15.15■□□□□ 0.02
CHCHD4P4-201ENST00000437690 SF3B3Q15393 1217 aaKnown RBP15.15■□□□□ 0.02
CHCHD4P4-201ENST00000437690 RTL5Q5HYW3 569 aaPredicted RBP15.15■□□□□ 0.02
CHCHD4P4-201ENST00000437690 RTKN2Q8IZC4 609 aa15.15■□□□□ 0.02
CHCHD4P4-201ENST00000437690 PSMD1Q99460 953 aa15.15■□□□□ 0.02
CHCHD4P4-201ENST00000437690 COL4A5P29400 1685 aa15.15■□□□□ 0.02
CHCHD4P4-201ENST00000437690 GLTPD2A6NH11 291 aa15.14■□□□□ 0.01
CHCHD4P4-201ENST00000437690 PCCAP05165 728 aaPredicted RBP15.14■□□□□ 0.01
CHCHD4P4-201ENST00000437690 CC2D2BQ6DHV5 1058 aa15.14■□□□□ 0.01
CHCHD4P4-201ENST00000437690 ZNF277Q9NRM2 450 aaPredicted RBP15.14■□□□□ 0.01
CHCHD4P4-201ENST00000437690 ATP6V0A2Q9Y487 856 aa15.14■□□□□ 0.01
CHCHD4P4-201ENST00000437690 TAF1P21675 1872 aa15.14■□□□□ 0.01
CHCHD4P4-201ENST00000437690 POTECB2RU33 542 aa15.13■□□□□ 0.01
CHCHD4P4-201ENST00000437690 IRS4O14654 1257 aaPredicted RBP15.13■□□□□ 0.01
CHCHD4P4-201ENST00000437690 SLFN5Q08AF3 891 aa15.13■□□□□ 0.01
CHCHD4P4-201ENST00000437690 CWF19L2Q2TBE0 894 aaKnown RBP15.13■□□□□ 0.01
CHCHD4P4-201ENST00000437690 CWC25Q9NXE8 425 aaPredicted RBP15.13■□□□□ 0.01
CHCHD4P4-201ENST00000437690 KDM2BQ8NHM5 1336 aa15.13■□□□□ 0.01
CHCHD4P4-201ENST00000437690 CACNA1FO60840 1977 aa15.13■□□□□ 0.01
CHCHD4P4-201ENST00000437690 NEURL1BA8MQ27 555 aa15.12■□□□□ 0.01
CHCHD4P4-201ENST00000437690 BBOX1O75936 387 aa15.12■□□□□ 0.01
CHCHD4P4-201ENST00000437690 IARSP41252 1262 aaKnown RBP15.12■□□□□ 0.01
CHCHD4P4-201ENST00000437690 GRAPQ13588 217 aa15.12■□□□□ 0.01
CHCHD4P4-201ENST00000437690 TRMT2AQ8IZ69 625 aaKnown RBP15.12■□□□□ 0.01
CHCHD4P4-201ENST00000437690 MIER1Q8N108 512 aa15.12■□□□□ 0.01
CHCHD4P4-201ENST00000437690 GRAPLQ8TC17 118 aaPredicted RBP15.12■□□□□ 0.01
CHCHD4P4-201ENST00000437690 JARID2Q92833 1246 aaPredicted RBP15.12■□□□□ 0.01
CHCHD4P4-201ENST00000437690 CDCA7LQ96GN5 454 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms