RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 GPC2Q8N158 579 aa17.66■□□□□ 0.42
CDC42EP1-204ENST00000434728 PSMD1Q99460 953 aa17.66■□□□□ 0.42
CDC42EP1-204ENST00000434728 PASKQ96RG2 1323 aa17.66■□□□□ 0.42
CDC42EP1-204ENST00000434728 FZD9O00144 591 aa17.65■□□□□ 0.42
CDC42EP1-204ENST00000434728 TCERG1O14776 1098 aaKnown RBP17.65■□□□□ 0.42
CDC42EP1-204ENST00000434728 EIF4A1P60842 406 aaKnown RBP17.65■□□□□ 0.42
CDC42EP1-204ENST00000434728 CRY2Q49AN0 593 aa17.65■□□□□ 0.42
CDC42EP1-204ENST00000434728 TTLL7Q6ZT98 887 aa17.65■□□□□ 0.42
CDC42EP1-204ENST00000434728 LARGE2Q8N3Y3 721 aa17.65■□□□□ 0.42
CDC42EP1-204ENST00000434728 RBM17Q96I25 401 aaKnown RBP17.65■□□□□ 0.42
CDC42EP1-204ENST00000434728 THUMPD2Q9BTF0 503 aaKnown RBP17.65■□□□□ 0.42
CDC42EP1-204ENST00000434728 GRIPAP1Q4V328 841 aa17.64■□□□□ 0.41
CDC42EP1-204ENST00000434728 MAP1SQ66K74 1059 aaPredicted RBP17.64■□□□□ 0.41
CDC42EP1-204ENST00000434728 PPP1R42Q7Z4L9 355 aa17.64■□□□□ 0.41
CDC42EP1-204ENST00000434728 ABT1Q9ULW3 272 aaKnown RBP17.64■□□□□ 0.41
CDC42EP1-204ENST00000434728 PPEF1O14829 653 aaPredicted RBP17.63■□□□□ 0.41
CDC42EP1-204ENST00000434728 CNTROBQ8N137 903 aa17.63■□□□□ 0.41
CDC42EP1-204ENST00000434728 TSPYL4Q9UJ04 414 aa17.63■□□□□ 0.41
CDC42EP1-204ENST00000434728 IBTKQ9P2D0 1353 aaPredicted RBP17.63■□□□□ 0.41
CDC42EP1-204ENST00000434728 FOXN1O15353 648 aa17.62■□□□□ 0.41
CDC42EP1-204ENST00000434728 ITGBL1O95965 494 aaPredicted RBP17.62■□□□□ 0.41
CDC42EP1-204ENST00000434728 VEGFBP49765 207 aa17.62■□□□□ 0.41
CDC42EP1-204ENST00000434728 SUSD4Q5VX71 490 aa17.62■□□□□ 0.41
CDC42EP1-204ENST00000434728 NIM1KQ8IY84 436 aa17.62■□□□□ 0.41
CDC42EP1-204ENST00000434728 UBN2Q6ZU65 1347 aa17.62■□□□□ 0.41
CDC42EP1-204ENST00000434728 EIF2S2P20042 333 aaKnown RBP17.61■□□□□ 0.41
CDC42EP1-204ENST00000434728 CTCFP49711 727 aaPredicted RBP17.61■□□□□ 0.41
CDC42EP1-204ENST00000434728 PARP10Q53GL7 1025 aa17.61■□□□□ 0.41
CDC42EP1-204ENST00000434728 GIGYF2Q6Y7W6 1299 aaKnown RBP17.61■□□□□ 0.41
CDC42EP1-204ENST00000434728 PAXIP1Q6ZW49 1069 aaPredicted RBP17.61■□□□□ 0.41
CDC42EP1-204ENST00000434728 NLRP3Q96P20 1036 aa17.61■□□□□ 0.41
CDC42EP1-204ENST00000434728 ERBB4Q15303 1308 aa17.61■□□□□ 0.41
CDC42EP1-204ENST00000434728 RIC1Q4ADV7 1423 aa17.61■□□□□ 0.41
CDC42EP1-204ENST00000434728 HOXA10P31260 410 aaPredicted RBP17.6■□□□□ 0.41
CDC42EP1-204ENST00000434728 DEFB115Q30KQ5 88 aa17.6■□□□□ 0.41
CDC42EP1-204ENST00000434728 CRAMP1Q96RY5 1269 aa17.6■□□□□ 0.41
CDC42EP1-204ENST00000434728 PLEKHF1Q96S99 279 aa17.6■□□□□ 0.41
CDC42EP1-204ENST00000434728 ADAMTSL1Q8N6G6 1762 aa17.59■□□□□ 0.41
CDC42EP1-204ENST00000434728 PPIP5K2O43314 1243 aa17.59■□□□□ 0.41
CDC42EP1-204ENST00000434728 NTSR2O95665 410 aa17.58■□□□□ 0.4
CDC42EP1-204ENST00000434728 ZNF34Q8IZ26 560 aa17.58■□□□□ 0.4
CDC42EP1-204ENST00000434728 UTP14AQ9BVJ6 771 aaKnown RBP17.58■□□□□ 0.4
CDC42EP1-204ENST00000434728 PRDM10Q9NQV6 1147 aa17.58■□□□□ 0.4
CDC42EP1-204ENST00000434728 RIPK4P57078 832 aa17.57■□□□□ 0.4
CDC42EP1-204ENST00000434728 LMOD3Q0VAK6 560 aa17.57■□□□□ 0.4
CDC42EP1-204ENST00000434728 GRM1Q13255 1194 aa17.57■□□□□ 0.4
CDC42EP1-204ENST00000434728 SNED1Q8TER0 1413 aa17.56■□□□□ 0.4
CDC42EP1-204ENST00000434728 RASSF10A6NK89 507 aa17.56■□□□□ 0.4
CDC42EP1-204ENST00000434728 EPS15P42566 896 aa17.56■□□□□ 0.4
CDC42EP1-204ENST00000434728 MAP2K1Q02750 393 aaPredicted RBP17.56■□□□□ 0.4
CDC42EP1-204ENST00000434728 AIMP1Q12904 312 aaKnown RBP17.56■□□□□ 0.4
CDC42EP1-204ENST00000434728 AOC3Q16853 763 aa17.56■□□□□ 0.4
CDC42EP1-204ENST00000434728 SUPT20HQ8NEM7 779 aa17.56■□□□□ 0.4
CDC42EP1-204ENST00000434728 NECTIN2Q92692 538 aa17.56■□□□□ 0.4
CDC42EP1-204ENST00000434728 BEGAINQ9BUH8 593 aa17.56■□□□□ 0.4
CDC42EP1-204ENST00000434728 DDX21Q9NR30 783 aaKnown RBP eCLIP17.56■□□□□ 0.4
CDC42EP1-204ENST00000434728 COL4A5P29400 1685 aa17.55■□□□□ 0.4
CDC42EP1-204ENST00000434728 WDR33Q9C0J8 1336 aaKnown RBP17.55■□□□□ 0.4
CDC42EP1-204ENST00000434728 LBX1P52954 281 aa17.55■□□□□ 0.4
CDC42EP1-204ENST00000434728 HSP90AB3PQ58FF7 597 aa17.55■□□□□ 0.4
CDC42EP1-204ENST00000434728 USP50Q70EL3 339 aaPredicted RBP17.55■□□□□ 0.4
CDC42EP1-204ENST00000434728 ANXA1P04083 346 aa17.54■□□□□ 0.4
CDC42EP1-204ENST00000434728 SCNN1DP51172 638 aa17.54■□□□□ 0.4
CDC42EP1-204ENST00000434728 DPP8Q6V1X1 898 aaPredicted RBP17.54■□□□□ 0.4
CDC42EP1-204ENST00000434728 C3orf67Q6ZVT6 689 aa17.54■□□□□ 0.4
CDC42EP1-204ENST00000434728 WBP1LQ9NX94 342 aa17.54■□□□□ 0.4
CDC42EP1-204ENST00000434728 ATP6V0A2Q9Y487 856 aa17.54■□□□□ 0.4
CDC42EP1-204ENST00000434728 ANKRD36CQ5JPF3 1778 aa17.53■□□□□ 0.4
CDC42EP1-204ENST00000434728 ABCC4O15439 1325 aa17.53■□□□□ 0.4
CDC42EP1-204ENST00000434728 TRPM7Q96QT4 1865 aa17.53■□□□□ 0.4
CDC42EP1-204ENST00000434728 ECE1P42892 770 aa17.53■□□□□ 0.4
CDC42EP1-204ENST00000434728 DDX46Q7L014 1031 aaKnown RBP17.53■□□□□ 0.4
CDC42EP1-204ENST00000434728 TRMT112Q9UI30 125 aaKnown RBP17.53■□□□□ 0.4
CDC42EP1-204ENST00000434728 LTBP1Q14766 1721 aa17.52■□□□□ 0.4
CDC42EP1-204ENST00000434728 NEUROD2Q15784 382 aa17.52■□□□□ 0.4
CDC42EP1-204ENST00000434728 PROSER3Q2NL68 480 aa17.52■□□□□ 0.4
CDC42EP1-204ENST00000434728 SLC51AQ86UW1 340 aa17.52■□□□□ 0.4
CDC42EP1-204ENST00000434728 BCL2L13Q9BXK5 485 aa17.52■□□□□ 0.4
CDC42EP1-204ENST00000434728 VPS33BQ9H267 617 aa17.52■□□□□ 0.4
CDC42EP1-204ENST00000434728 ADARB2Q9NS39 739 aaKnown RBP17.52■□□□□ 0.4
CDC42EP1-204ENST00000434728 BABAM1Q9NWV8 329 aa17.52■□□□□ 0.4
CDC42EP1-204ENST00000434728 ZNRF3Q9ULT6 936 aa17.52■□□□□ 0.4
CDC42EP1-204ENST00000434728 LAS1LQ9Y4W2 734 aaKnown RBP17.52■□□□□ 0.4
CDC42EP1-204ENST00000434728 BBOX1O75936 387 aa17.51■□□□□ 0.39
CDC42EP1-204ENST00000434728 HCLS1P14317 486 aaPredicted RBP17.51■□□□□ 0.39
CDC42EP1-204ENST00000434728 PDIA6Q15084 440 aa17.51■□□□□ 0.39
CDC42EP1-204ENST00000434728 COPS6Q7L5N1 327 aa17.51■□□□□ 0.39
CDC42EP1-204ENST00000434728 MPNDQ8N594 471 aa17.51■□□□□ 0.39
CDC42EP1-204ENST00000434728 XAGE3Q8WTP9 111 aa17.51■□□□□ 0.39
CDC42EP1-204ENST00000434728 CAPNS2Q96L46 248 aa17.51■□□□□ 0.39
CDC42EP1-204ENST00000434728 GPRC5DQ9NZD1 345 aa17.51■□□□□ 0.39
CDC42EP1-204ENST00000434728 TRAF5O00463 557 aa17.5■□□□□ 0.39
CDC42EP1-204ENST00000434728 TMPOP42166 694 aaKnown RBP17.5■□□□□ 0.39
CDC42EP1-204ENST00000434728 RALBP1Q15311 655 aa17.5■□□□□ 0.39
CDC42EP1-204ENST00000434728 SLC10A5Q5PT55 438 aa17.5■□□□□ 0.39
CDC42EP1-204ENST00000434728 LAMB2P55268 1798 aa17.5■□□□□ 0.39
CDC42EP1-204ENST00000434728 SH3TC1Q8TE82 1336 aa17.49■□□□□ 0.39
CDC42EP1-204ENST00000434728 FMR1Q06787 632 aaKnown RBP eCLIP17.49■□□□□ 0.39
CDC42EP1-204ENST00000434728 TNIP1Q15025 636 aa17.49■□□□□ 0.39
CDC42EP1-204ENST00000434728 CIAPIN1Q6FI81 312 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms