RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 EZH2Q15910 746 aaKnown RBP6.97□□□□□ -1.29
RFC3-202ENST00000434425 CFAP70Q5T0N1 1121 aa6.97□□□□□ -1.29
RFC3-202ENST00000434425 GPR153Q6NV75 609 aa6.97□□□□□ -1.29
RFC3-202ENST00000434425 PCGF5Q86SE9 256 aa6.97□□□□□ -1.29
RFC3-202ENST00000434425 NPAS4Q8IUM7 802 aa6.97□□□□□ -1.29
RFC3-202ENST00000434425 TTC13Q8NBP0 860 aa6.97□□□□□ -1.29
RFC3-202ENST00000434425 ZDHHC16Q969W1 377 aa6.97□□□□□ -1.29
RFC3-202ENST00000434425 IRF2BPLQ9H1B7 796 aa6.97□□□□□ -1.29
RFC3-202ENST00000434425 C14orf93Q9H972 538 aaKnown RBP6.97□□□□□ -1.29
RFC3-202ENST00000434425 GABBR1Q9UBS5 961 aa6.97□□□□□ -1.29
RFC3-202ENST00000434425 NRBP1Q9UHY1 535 aa6.97□□□□□ -1.29
RFC3-202ENST00000434425 ADGRG1Q9Y653 693 aa6.97□□□□□ -1.29
RFC3-202ENST00000434425 SBNO1A3KN83 1393 aa6.97□□□□□ -1.29
RFC3-202ENST00000434425 IFT172Q9UG01 1749 aa6.96□□□□□ -1.29
RFC3-202ENST00000434425 WDHD1O75717 1129 aaPredicted RBP6.96□□□□□ -1.3
RFC3-202ENST00000434425 CSB-PGBD3P0DP91 1061 aa6.96□□□□□ -1.3
RFC3-202ENST00000434425 SRPK2P78362 688 aaKnown RBP6.96□□□□□ -1.3
RFC3-202ENST00000434425 SDE2Q6IQ49 451 aa6.96□□□□□ -1.3
RFC3-202ENST00000434425 GET4Q7L5D6 327 aaPredicted RBP6.96□□□□□ -1.3
RFC3-202ENST00000434425 PXYLP1Q8TE99 480 aa6.96□□□□□ -1.3
RFC3-202ENST00000434425 PRAM1Q96QH2 718 aa6.96□□□□□ -1.3
RFC3-202ENST00000434425 MPHOSPH9Q99550 1183 aa6.96□□□□□ -1.3
RFC3-202ENST00000434425 FAM217BQ9NTX9 383 aaPredicted RBP6.96□□□□□ -1.3
RFC3-202ENST00000434425 CUEDC1Q9NWM3 386 aaPredicted RBP6.96□□□□□ -1.3
RFC3-202ENST00000434425 FAM198AQ9UFP1 575 aa6.96□□□□□ -1.3
RFC3-202ENST00000434425 ZNF330Q9Y3S2 320 aaPredicted RBP6.96□□□□□ -1.3
RFC3-202ENST00000434425 KNDC1Q76NI1 1749 aa6.96□□□□□ -1.3
RFC3-202ENST00000434425 ANKRD30BQ9BXX2 1392 aa6.96□□□□□ -1.3
RFC3-202ENST00000434425 NRXN1Q9ULB1 1477 aa6.96□□□□□ -1.3
RFC3-202ENST00000434425 PIK3C2GO75747 1445 aa6.95□□□□□ -1.3
RFC3-202ENST00000434425 ABCA3Q99758 1704 aa6.95□□□□□ -1.3
RFC3-202ENST00000434425 CARNS1A5YM72 827 aa6.95□□□□□ -1.3
RFC3-202ENST00000434425 C3orf80F5H4A9 247 aa6.95□□□□□ -1.3
RFC3-202ENST00000434425 DHX16O60231 1041 aaKnown RBP6.95□□□□□ -1.3
RFC3-202ENST00000434425 STK10O94804 968 aaKnown RBP6.95□□□□□ -1.3
RFC3-202ENST00000434425 POU5F1Q01860 360 aaKnown RBP6.95□□□□□ -1.3
RFC3-202ENST00000434425 PROCA1Q8NCQ7 364 aaPredicted RBP6.95□□□□□ -1.3
RFC3-202ENST00000434425 PCMTD1Q96MG8 357 aaPredicted RBP6.95□□□□□ -1.3
RFC3-202ENST00000434425 CAMKK2Q96RR4 588 aa6.95□□□□□ -1.3
RFC3-202ENST00000434425 BEGAINQ9BUH8 593 aa6.95□□□□□ -1.3
RFC3-202ENST00000434425 LNPKQ9C0E8 428 aa6.95□□□□□ -1.3
RFC3-202ENST00000434425 PRDM4Q9UKN5 801 aa6.95□□□□□ -1.3
RFC3-202ENST00000434425 TPX2Q9ULW0 747 aaKnown RBP6.95□□□□□ -1.3
RFC3-202ENST00000434425 ARHGEF10O15013 1369 aa6.95□□□□□ -1.3
RFC3-202ENST00000434425 ERBB3P21860 1342 aa6.95□□□□□ -1.3
RFC3-202ENST00000434425 SPATA31A5Q5VU36 1347 aa6.95□□□□□ -1.3
RFC3-202ENST00000434425 SPATA31A7Q8IWB4 1347 aa6.95□□□□□ -1.3
RFC3-202ENST00000434425 NRAPQ86VF7 1730 aa6.94□□□□□ -1.3
RFC3-202ENST00000434425 RRP9O43818 475 aaKnown RBP6.94□□□□□ -1.3
RFC3-202ENST00000434425 TRIM37O94972 964 aa6.94□□□□□ -1.3
RFC3-202ENST00000434425 SEMA3FQ13275 785 aa6.94□□□□□ -1.3
RFC3-202ENST00000434425 PUS10Q3MIT2 529 aaKnown RBP6.94□□□□□ -1.3
RFC3-202ENST00000434425 SH3D19Q5HYK7 790 aa6.94□□□□□ -1.3
RFC3-202ENST00000434425 CCAR1Q8IX12 1150 aaKnown RBP6.94□□□□□ -1.3
RFC3-202ENST00000434425 CCDC146Q8IYE0 955 aa6.94□□□□□ -1.3
RFC3-202ENST00000434425 POGKQ9P215 609 aa6.94□□□□□ -1.3
RFC3-202ENST00000434425 LHX6Q9UPM6 363 aa6.94□□□□□ -1.3
RFC3-202ENST00000434425 COL9A1P20849 921 aa6.93□□□□□ -1.3
RFC3-202ENST00000434425 EVA1CP58658 441 aa6.93□□□□□ -1.3
RFC3-202ENST00000434425 ANKRD23Q86SG2 305 aa6.93□□□□□ -1.3
RFC3-202ENST00000434425 BCL2L13Q9BXK5 485 aa6.93□□□□□ -1.3
RFC3-202ENST00000434425 RGPD1P0DJD0 1748 aa6.93□□□□□ -1.3
RFC3-202ENST00000434425 APBA3O96018 575 aa6.92□□□□□ -1.3
RFC3-202ENST00000434425 OATP04181 439 aa6.92□□□□□ -1.3
RFC3-202ENST00000434425 PRSS12P56730 875 aa6.92□□□□□ -1.3
RFC3-202ENST00000434425 TBX4P57082 545 aa6.92□□□□□ -1.3
RFC3-202ENST00000434425 MTA1Q13330 715 aa6.92□□□□□ -1.3
RFC3-202ENST00000434425 CHRNA2Q15822 529 aa6.92□□□□□ -1.3
RFC3-202ENST00000434425 ICE2Q659A1 982 aa6.92□□□□□ -1.3
RFC3-202ENST00000434425 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.92□□□□□ -1.34e-7■■■□□ 17.1
RFC3-202ENST00000434425 NLGN1Q8N2Q7 840 aa6.92□□□□□ -1.3
RFC3-202ENST00000434425 CDCA7LQ96GN5 454 aa6.92□□□□□ -1.3
RFC3-202ENST00000434425 ZNF830Q96NB3 372 aaPredicted RBP6.92□□□□□ -1.3
RFC3-202ENST00000434425 POLR3EQ9NVU0 708 aa6.92□□□□□ -1.3
RFC3-202ENST00000434425 TRAK1Q9UPV9 953 aa6.92□□□□□ -1.3
RFC3-202ENST00000434425 COL14A1Q05707 1796 aaKnown RBP6.92□□□□□ -1.3
RFC3-202ENST00000434425 PRR36Q9H6K5 1346 aa6.92□□□□□ -1.3
RFC3-202ENST00000434425 TRPM3Q9HCF6 1732 aaPredicted RBP6.92□□□□□ -1.3
RFC3-202ENST00000434425 GOLGB1Q14789 3259 aaKnown RBP6.92□□□□□ -1.3
RFC3-202ENST00000434425 ALS2Q96Q42 1657 aa6.92□□□□□ -1.3
RFC3-202ENST00000434425 TCERG1O14776 1098 aaKnown RBP6.92□□□□□ -1.3
RFC3-202ENST00000434425 RECKO95980 971 aa6.92□□□□□ -1.3
RFC3-202ENST00000434425 EMP3P54852 163 aa6.92□□□□□ -1.3
RFC3-202ENST00000434425 DOK7Q18PE1 504 aa6.92□□□□□ -1.3
RFC3-202ENST00000434425 PLEKHG6Q3KR16 790 aa6.92□□□□□ -1.3
RFC3-202ENST00000434425 FAM196AQ6ZSG2 479 aa6.92□□□□□ -1.3
RFC3-202ENST00000434425 VRTNQ9H8Y1 702 aa6.92□□□□□ -1.3
RFC3-202ENST00000434425 WWC3Q9ULE0 1092 aa6.92□□□□□ -1.3
RFC3-202ENST00000434425 TNS1Q9HBL0 1735 aaKnown RBP6.91□□□□□ -1.3
RFC3-202ENST00000434425 SPATA31A1Q5TZJ5 1347 aa6.91□□□□□ -1.3
RFC3-202ENST00000434425 GPRASP1Q5JY77 1395 aa6.91□□□□□ -1.3
RFC3-202ENST00000434425 DISP2A7MBM2 1401 aa6.91□□□□□ -1.3
RFC3-202ENST00000434425 FAM200BP0CF97 657 aa6.91□□□□□ -1.3
RFC3-202ENST00000434425 VDRP11473 427 aa6.91□□□□□ -1.3
RFC3-202ENST00000434425 YY1P25490 414 aa6.91□□□□□ -1.3
RFC3-202ENST00000434425 IRX3P78415 501 aaPredicted RBP6.91□□□□□ -1.3
RFC3-202ENST00000434425 NGDNQ8NEJ9 315 aaKnown RBP6.91□□□□□ -1.3
RFC3-202ENST00000434425 GIPC2Q8TF65 315 aa6.91□□□□□ -1.3
RFC3-202ENST00000434425 INO80BQ9C086 356 aaPredicted RBP6.91□□□□□ -1.3
RFC3-202ENST00000434425 PRDM11Q9NQV5 511 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 188.7 ms