RNA–Protein interactions for RNA: ENST00000433028.6

CHEK2-213, Transcript of checkpoint kinase 2, humanhuman

TSL 5

Gene CHEK2, Length 1,349 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-213ENST00000433028 LAMB2P55268 1798 aa17.45■□□□□ 0.38
CHEK2-213ENST00000433028 NEUROD2Q15784 382 aa17.45■□□□□ 0.38
CHEK2-213ENST00000433028 PPP1R42Q7Z4L9 355 aa17.45■□□□□ 0.38
CHEK2-213ENST00000433028 L3MBTL3Q96JM7 780 aaPredicted RBP17.45■□□□□ 0.38
CHEK2-213ENST00000433028 ZNF277Q9NRM2 450 aaPredicted RBP17.45■□□□□ 0.38
CHEK2-213ENST00000433028 CC2D2BQ6DHV5 1058 aa17.44■□□□□ 0.38
CHEK2-213ENST00000433028 JMYQ8N9B5 988 aa17.44■□□□□ 0.38
CHEK2-213ENST00000433028 RPGRQ92834 1020 aaKnown RBP17.44■□□□□ 0.38
CHEK2-213ENST00000433028 PSMD1Q99460 953 aa17.44■□□□□ 0.38
CHEK2-213ENST00000433028 PRKRIP1Q9H875 184 aaPredicted RBP17.44■□□□□ 0.38
CHEK2-213ENST00000433028 ADAMTS8Q9UP79 889 aa17.44■□□□□ 0.38
CHEK2-213ENST00000433028 ANXA1P04083 346 aa17.43■□□□□ 0.38
CHEK2-213ENST00000433028 CRAMP1Q96RY5 1269 aa17.43■□□□□ 0.38
CHEK2-213ENST00000433028 RNF123Q5XPI4 1314 aa17.42■□□□□ 0.38
CHEK2-213ENST00000433028 IQCA1LA6NCM1 817 aa17.42■□□□□ 0.38
CHEK2-213ENST00000433028 IARSP41252 1262 aaKnown RBP17.42■□□□□ 0.38
CHEK2-213ENST00000433028 CACNB1Q02641 598 aaPredicted RBP17.42■□□□□ 0.38
CHEK2-213ENST00000433028 GRIPAP1Q4V328 841 aa17.42■□□□□ 0.38
CHEK2-213ENST00000433028 SLC10A5Q5PT55 438 aa17.42■□□□□ 0.38
CHEK2-213ENST00000433028 SYNE4Q8N205 404 aa17.42■□□□□ 0.38
CHEK2-213ENST00000433028 DDX21Q9NR30 783 aaKnown RBP eCLIP17.42■□□□□ 0.38
CHEK2-213ENST00000433028 ZNF541Q9H0D2 1346 aa17.41■□□□□ 0.38
CHEK2-213ENST00000433028 FZD9O00144 591 aa17.41■□□□□ 0.38
CHEK2-213ENST00000433028 KRT24Q2M2I5 525 aa17.41■□□□□ 0.38
CHEK2-213ENST00000433028 HSP90AB3PQ58FF7 597 aa17.41■□□□□ 0.38
CHEK2-213ENST00000433028 IFFO2Q5TF58 517 aa17.41■□□□□ 0.38
CHEK2-213ENST00000433028 COPS6Q7L5N1 327 aa17.41■□□□□ 0.38
CHEK2-213ENST00000433028 RBM17Q96I25 401 aaKnown RBP17.41■□□□□ 0.38
CHEK2-213ENST00000433028 UTP14AQ9BVJ6 771 aaKnown RBP17.41■□□□□ 0.38
CHEK2-213ENST00000433028 HOXB7P09629 217 aa17.4■□□□□ 0.38
CHEK2-213ENST00000433028 CHADLQ6NUI6 762 aa17.4■□□□□ 0.38
CHEK2-213ENST00000433028 C3orf67Q6ZVT6 689 aa17.4■□□□□ 0.38
CHEK2-213ENST00000433028 XAGE3Q8WTP9 111 aa17.4■□□□□ 0.38
CHEK2-213ENST00000433028 NECTIN2Q92692 538 aa17.4■□□□□ 0.38
CHEK2-213ENST00000433028 NLRP3Q96P20 1036 aa17.4■□□□□ 0.38
CHEK2-213ENST00000433028 ADAMTSL1Q8N6G6 1762 aa17.39■□□□□ 0.37
CHEK2-213ENST00000433028 COL4A5P29400 1685 aa17.39■□□□□ 0.37
CHEK2-213ENST00000433028 POTEIP0CG38 1075 aa17.39■□□□□ 0.37
CHEK2-213ENST00000433028 POTEJP0CG39 1038 aa17.39■□□□□ 0.37
CHEK2-213ENST00000433028 CFAP44Q96MT7 982 aa17.39■□□□□ 0.37
CHEK2-213ENST00000433028 TAF1DQ9H5J8 278 aaPredicted RBP17.39■□□□□ 0.37
CHEK2-213ENST00000433028 LAS1LQ9Y4W2 734 aaKnown RBP17.39■□□□□ 0.37
CHEK2-213ENST00000433028 AIMP1Q12904 312 aaKnown RBP17.38■□□□□ 0.37
CHEK2-213ENST00000433028 TCIRG1Q13488 830 aa17.38■□□□□ 0.37
CHEK2-213ENST00000433028 NLRP10Q86W26 655 aa17.38■□□□□ 0.37
CHEK2-213ENST00000433028 CHPF2Q9P2E5 772 aa17.38■□□□□ 0.37
CHEK2-213ENST00000433028 TAF1P21675 1872 aa17.37■□□□□ 0.37
CHEK2-213ENST00000433028 PPEF1O14829 653 aaPredicted RBP17.37■□□□□ 0.37
CHEK2-213ENST00000433028 LDHDQ86WU2 507 aa17.37■□□□□ 0.37
CHEK2-213ENST00000433028 GPC2Q8N158 579 aa17.37■□□□□ 0.37
CHEK2-213ENST00000433028 JDP2Q8WYK2 163 aa17.37■□□□□ 0.37
CHEK2-213ENST00000433028 DDX60Q8IY21 1712 aaKnown RBP17.37■□□□□ 0.37
CHEK2-213ENST00000433028 HDGFL1Q5TGJ6 251 aa17.36■□□□□ 0.37
CHEK2-213ENST00000433028 DBF4Q9UBU7 674 aaPredicted RBP17.36■□□□□ 0.37
CHEK2-213ENST00000433028 HACL1Q9UJ83 578 aa17.36■□□□□ 0.37
CHEK2-213ENST00000433028 ZNF853P0CG23 659 aa17.35■□□□□ 0.37
CHEK2-213ENST00000433028 PLBD2Q8NHP8 589 aa17.35■□□□□ 0.37
CHEK2-213ENST00000433028 ATP6V0A2Q9Y487 856 aa17.35■□□□□ 0.37
CHEK2-213ENST00000433028 ABCC4O15439 1325 aa17.34■□□□□ 0.37
CHEK2-213ENST00000433028 SH3TC1Q8TE82 1336 aa17.34■□□□□ 0.37
CHEK2-213ENST00000433028 SLC51AQ86UW1 340 aa17.34■□□□□ 0.37
CHEK2-213ENST00000433028 CREBZFQ9NS37 354 aa17.34■□□□□ 0.37
CHEK2-213ENST00000433028 MBIPQ9NS73 344 aa17.34■□□□□ 0.37
CHEK2-213ENST00000433028 TRMT112Q9UI30 125 aaKnown RBP17.34■□□□□ 0.37
CHEK2-213ENST00000433028 PASKQ96RG2 1323 aa17.33■□□□□ 0.37
CHEK2-213ENST00000433028 LRRC37AA6NMS7 1700 aa17.33■□□□□ 0.37
CHEK2-213ENST00000433028 LTBP1Q14766 1721 aa17.33■□□□□ 0.37
CHEK2-213ENST00000433028 APAF1O14727 1248 aa17.33■□□□□ 0.36
CHEK2-213ENST00000433028 HCLS1P14317 486 aaPredicted RBP17.33■□□□□ 0.36
CHEK2-213ENST00000433028 EPHX2P34913 555 aa17.33■□□□□ 0.36
CHEK2-213ENST00000433028 DUSP27Q5VZP5 1158 aa17.33■□□□□ 0.36
CHEK2-213ENST00000433028 ANKRD13DQ6ZTN6 518 aa17.33■□□□□ 0.36
CHEK2-213ENST00000433028 PNMA8AQ86V59 439 aaPredicted RBP17.33■□□□□ 0.36
CHEK2-213ENST00000433028 LARGE2Q8N3Y3 721 aa17.33■□□□□ 0.36
CHEK2-213ENST00000433028 VPS33BQ9H267 617 aa17.33■□□□□ 0.36
CHEK2-213ENST00000433028 HYPKQ9NX55 129 aa17.33■□□□□ 0.36
CHEK2-213ENST00000433028 TCERG1O14776 1098 aaKnown RBP17.32■□□□□ 0.36
CHEK2-213ENST00000433028 BBOX1O75936 387 aa17.32■□□□□ 0.36
CHEK2-213ENST00000433028 EIF6P56537 245 aaKnown RBP17.32■□□□□ 0.36
CHEK2-213ENST00000433028 TMX4Q9H1E5 349 aaPredicted RBP17.32■□□□□ 0.36
CHEK2-213ENST00000433028 IFT57Q9NWB7 429 aa17.32■□□□□ 0.36
CHEK2-213ENST00000433028 ITGBL1O95965 494 aaPredicted RBP17.31■□□□□ 0.36
CHEK2-213ENST00000433028 CALD1Q05682 793 aaKnown RBP17.31■□□□□ 0.36
CHEK2-213ENST00000433028 ISCA1Q9BUE6 129 aa17.31■□□□□ 0.36
CHEK2-213ENST00000433028 RTFDC1Q9BY42 306 aaPredicted RBP17.31■□□□□ 0.36
CHEK2-213ENST00000433028 GNAI1P63096 354 aa17.3■□□□□ 0.36
CHEK2-213ENST00000433028 EAPPQ56P03 285 aaPredicted RBP17.3■□□□□ 0.36
CHEK2-213ENST00000433028 SP8Q8IXZ3 490 aa17.3■□□□□ 0.36
CHEK2-213ENST00000433028 PPIP5K2O43314 1243 aa17.29■□□□□ 0.36
CHEK2-213ENST00000433028 TRIM28Q13263 835 aaKnown RBP17.29■□□□□ 0.36
CHEK2-213ENST00000433028 GRAPQ13588 217 aa17.29■□□□□ 0.36
CHEK2-213ENST00000433028 PPP4R3CPQ6ZMV5 832 aa17.29■□□□□ 0.36
CHEK2-213ENST00000433028 DDX46Q7L014 1031 aaKnown RBP17.29■□□□□ 0.36
CHEK2-213ENST00000433028 NIM1KQ8IY84 436 aa17.29■□□□□ 0.36
CHEK2-213ENST00000433028 SUPT20HQ8NEM7 779 aa17.29■□□□□ 0.36
CHEK2-213ENST00000433028 GRAPLQ8TC17 118 aaPredicted RBP17.29■□□□□ 0.36
CHEK2-213ENST00000433028 GJA3Q9Y6H8 435 aa17.29■□□□□ 0.36
CHEK2-213ENST00000433028 SCNN1DP51172 638 aa17.28■□□□□ 0.36
CHEK2-213ENST00000433028 AOC3Q16853 763 aa17.28■□□□□ 0.36
CHEK2-213ENST00000433028 TMC4Q7Z404 712 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms