RNA–Protein interactions for RNA: ENST00000431116.2

HMGN1P38-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 38, humanhuman

BASIC

Gene HMGN1P38, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P38-201ENST00000431116 GIGYF2Q6Y7W6 1299 aaKnown RBP13.27□□□□□ -0.29
HMGN1P38-201ENST00000431116 LRP10Q7Z4F1 713 aa13.27□□□□□ -0.29
HMGN1P38-201ENST00000431116 ZNF34Q8IZ26 560 aa13.27□□□□□ -0.29
HMGN1P38-201ENST00000431116 C7orf43Q8WVR3 580 aa13.27□□□□□ -0.29
HMGN1P38-201ENST00000431116 NECTIN2Q92692 538 aa13.27□□□□□ -0.29
HMGN1P38-201ENST00000431116 CHL1O00533 1208 aa13.26□□□□□ -0.29
HMGN1P38-201ENST00000431116 VEGFAP15692 232 aaPredicted RBP13.26□□□□□ -0.29
HMGN1P38-201ENST00000431116 KRT24Q2M2I5 525 aa13.26□□□□□ -0.29
HMGN1P38-201ENST00000431116 CRY2Q49AN0 593 aa13.26□□□□□ -0.29
HMGN1P38-201ENST00000431116 SUSD4Q5VX71 490 aa13.26□□□□□ -0.29
HMGN1P38-201ENST00000431116 SMC1BQ8NDV3 1235 aa13.26□□□□□ -0.29
HMGN1P38-201ENST00000431116 RPGRQ92834 1020 aaKnown RBP13.26□□□□□ -0.29
HMGN1P38-201ENST00000431116 NTSR2O95665 410 aa13.25□□□□□ -0.29
HMGN1P38-201ENST00000431116 ALDH1B1P30837 517 aa13.25□□□□□ -0.29
HMGN1P38-201ENST00000431116 PARP10Q53GL7 1025 aa13.25□□□□□ -0.29
HMGN1P38-201ENST00000431116 SCN4AP35499 1836 aa13.25□□□□□ -0.29
HMGN1P38-201ENST00000431116 DSG3P32926 999 aa13.24□□□□□ -0.29
HMGN1P38-201ENST00000431116 FKBP4Q02790 459 aaKnown RBP eCLIP13.24□□□□□ -0.29
HMGN1P38-201ENST00000431116 AIMP1Q12904 312 aaKnown RBP13.24□□□□□ -0.29
HMGN1P38-201ENST00000431116 PPP1R42Q7Z4L9 355 aa13.24□□□□□ -0.29
HMGN1P38-201ENST00000431116 RTKN2Q8IZC4 609 aa13.24□□□□□ -0.29
HMGN1P38-201ENST00000431116 XAGE3Q8WTP9 111 aa13.24□□□□□ -0.29
HMGN1P38-201ENST00000431116 ZNF277Q9NRM2 450 aaPredicted RBP13.24□□□□□ -0.29
HMGN1P38-201ENST00000431116 SNED1Q8TER0 1413 aa13.23□□□□□ -0.29
HMGN1P38-201ENST00000431116 CEP350Q5VT06 3117 aa13.23□□□□□ -0.29
HMGN1P38-201ENST00000431116 POTECB2RU33 542 aa13.23□□□□□ -0.29
HMGN1P38-201ENST00000431116 HDGFL1Q5TGJ6 251 aa13.23□□□□□ -0.29
HMGN1P38-201ENST00000431116 C3orf67Q6ZVT6 689 aa13.23□□□□□ -0.29
HMGN1P38-201ENST00000431116 COPS6Q7L5N1 327 aa13.23□□□□□ -0.29
HMGN1P38-201ENST00000431116 UTP14AQ9BVJ6 771 aaKnown RBP13.23□□□□□ -0.29
HMGN1P38-201ENST00000431116 DDX21Q9NR30 783 aaKnown RBP eCLIP13.23□□□□□ -0.29
HMGN1P38-201ENST00000431116 CHPF2Q9P2E5 772 aa13.23□□□□□ -0.29
HMGN1P38-201ENST00000431116 DDNO94850 711 aaPredicted RBP13.22□□□□□ -0.29
HMGN1P38-201ENST00000431116 HOXA10P31260 410 aaPredicted RBP13.22□□□□□ -0.29
HMGN1P38-201ENST00000431116 HTRA3P83110 453 aa13.22□□□□□ -0.29
HMGN1P38-201ENST00000431116 HSP90AB3PQ58FF7 597 aa13.22□□□□□ -0.29
HMGN1P38-201ENST00000431116 CFAP44Q96MT7 982 aa13.22□□□□□ -0.29
HMGN1P38-201ENST00000431116 MBIPQ9NS73 344 aa13.22□□□□□ -0.29
HMGN1P38-201ENST00000431116 DDX60Q8IY21 1712 aaKnown RBP13.22□□□□□ -0.29
HMGN1P38-201ENST00000431116 RNF123Q5XPI4 1314 aa13.21□□□□□ -0.29
HMGN1P38-201ENST00000431116 ZNF541Q9H0D2 1346 aa13.21□□□□□ -0.29
HMGN1P38-201ENST00000431116 APAF1O14727 1248 aa13.21□□□□□ -0.29
HMGN1P38-201ENST00000431116 HOXB7P09629 217 aa13.21□□□□□ -0.29
HMGN1P38-201ENST00000431116 IARSP41252 1262 aaKnown RBP13.21□□□□□ -0.29
HMGN1P38-201ENST00000431116 RBM17Q96I25 401 aaKnown RBP13.21□□□□□ -0.29
HMGN1P38-201ENST00000431116 TCERG1O14776 1098 aaKnown RBP13.2□□□□□ -0.3
HMGN1P38-201ENST00000431116 PPEF1O14829 653 aaPredicted RBP13.2□□□□□ -0.3
HMGN1P38-201ENST00000431116 CC2D2BQ6DHV5 1058 aa13.2□□□□□ -0.3
HMGN1P38-201ENST00000431116 NLRP10Q86W26 655 aa13.2□□□□□ -0.3
HMGN1P38-201ENST00000431116 SYNE4Q8N205 404 aa13.2□□□□□ -0.3
HMGN1P38-201ENST00000431116 NLRP3Q96P20 1036 aa13.2□□□□□ -0.3
HMGN1P38-201ENST00000431116 CRAMP1Q96RY5 1269 aa13.2□□□□□ -0.3
HMGN1P38-201ENST00000431116 PSMD1Q99460 953 aa13.2□□□□□ -0.3
HMGN1P38-201ENST00000431116 COL4A5P29400 1685 aa13.2□□□□□ -0.3
HMGN1P38-201ENST00000431116 TAF1P21675 1872 aa13.2□□□□□ -0.3
HMGN1P38-201ENST00000431116 CALD1Q05682 793 aaKnown RBP13.19□□□□□ -0.3
HMGN1P38-201ENST00000431116 TCIRG1Q13488 830 aa13.19□□□□□ -0.3
HMGN1P38-201ENST00000431116 DUSP27Q5VZP5 1158 aa13.19□□□□□ -0.3
HMGN1P38-201ENST00000431116 SLC51AQ86UW1 340 aa13.19□□□□□ -0.3
HMGN1P38-201ENST00000431116 DNAJC5GQ8N7S2 189 aa13.19□□□□□ -0.3
HMGN1P38-201ENST00000431116 L3MBTL3Q96JM7 780 aaPredicted RBP13.19□□□□□ -0.3
HMGN1P38-201ENST00000431116 IFT57Q9NWB7 429 aa13.19□□□□□ -0.3
HMGN1P38-201ENST00000431116 DBF4Q9UBU7 674 aaPredicted RBP13.19□□□□□ -0.3
HMGN1P38-201ENST00000431116 ABCC4O15439 1325 aa13.18□□□□□ -0.3
HMGN1P38-201ENST00000431116 SH3TC1Q8TE82 1336 aa13.18□□□□□ -0.3
HMGN1P38-201ENST00000431116 IQCA1LA6NCM1 817 aa13.18□□□□□ -0.3
HMGN1P38-201ENST00000431116 ZNF853P0CG23 659 aa13.18□□□□□ -0.3
HMGN1P38-201ENST00000431116 ZEB1P37275 1124 aaPredicted RBP13.18□□□□□ -0.3
HMGN1P38-201ENST00000431116 GNAI1P63096 354 aa13.18□□□□□ -0.3
HMGN1P38-201ENST00000431116 SLC10A5Q5PT55 438 aa13.18□□□□□ -0.3
HMGN1P38-201ENST00000431116 JDP2Q8WYK2 163 aa13.18□□□□□ -0.3
HMGN1P38-201ENST00000431116 ZNF428Q96B54 188 aa13.18□□□□□ -0.3
HMGN1P38-201ENST00000431116 TRMT112Q9UI30 125 aaKnown RBP13.18□□□□□ -0.3
HMGN1P38-201ENST00000431116 POTEIP0CG38 1075 aa13.17□□□□□ -0.3
HMGN1P38-201ENST00000431116 POTEJP0CG39 1038 aa13.17□□□□□ -0.3
HMGN1P38-201ENST00000431116 HCLS1P14317 486 aaPredicted RBP13.17□□□□□ -0.3
HMGN1P38-201ENST00000431116 GRIPAP1Q4V328 841 aa13.17□□□□□ -0.3
HMGN1P38-201ENST00000431116 CHADLQ6NUI6 762 aa13.17□□□□□ -0.3
HMGN1P38-201ENST00000431116 PLBD2Q8NHP8 589 aa13.17□□□□□ -0.3
HMGN1P38-201ENST00000431116 KLRG1Q96E93 195 aa13.17□□□□□ -0.3
HMGN1P38-201ENST00000431116 HYPKQ9NX55 129 aa13.17□□□□□ -0.3
HMGN1P38-201ENST00000431116 ADAMTSL1Q8N6G6 1762 aa13.17□□□□□ -0.3
HMGN1P38-201ENST00000431116 LRRC37AA6NMS7 1700 aa13.16□□□□□ -0.3
HMGN1P38-201ENST00000431116 FZD9O00144 591 aa13.16□□□□□ -0.3
HMGN1P38-201ENST00000431116 CCDC184Q52MB2 194 aa13.16□□□□□ -0.3
HMGN1P38-201ENST00000431116 ANKRD13DQ6ZTN6 518 aa13.16□□□□□ -0.3
HMGN1P38-201ENST00000431116 LARGE2Q8N3Y3 721 aa13.16□□□□□ -0.3
HMGN1P38-201ENST00000431116 TMX4Q9H1E5 349 aaPredicted RBP13.16□□□□□ -0.3
HMGN1P38-201ENST00000431116 ELL2O00472 640 aaPredicted RBP13.15□□□□□ -0.3
HMGN1P38-201ENST00000431116 GPC2Q8N158 579 aa13.15□□□□□ -0.3
HMGN1P38-201ENST00000431116 TAF1DQ9H5J8 278 aaPredicted RBP13.15□□□□□ -0.3
HMGN1P38-201ENST00000431116 HACL1Q9UJ83 578 aa13.15□□□□□ -0.3
HMGN1P38-201ENST00000431116 ATP6V0A2Q9Y487 856 aa13.15□□□□□ -0.3
HMGN1P38-201ENST00000431116 LTBP1Q14766 1721 aa13.15□□□□□ -0.3
HMGN1P38-201ENST00000431116 ATP5J2-PTCD1G3V325 749 aa13.14□□□□□ -0.31
HMGN1P38-201ENST00000431116 PPIP5K2O43314 1243 aa13.14□□□□□ -0.31
HMGN1P38-201ENST00000431116 EIF6P56537 245 aaKnown RBP13.14□□□□□ -0.31
HMGN1P38-201ENST00000431116 GOLGA2Q08379 1002 aa13.14□□□□□ -0.31
HMGN1P38-201ENST00000431116 EAPPQ56P03 285 aaPredicted RBP13.14□□□□□ -0.31
HMGN1P38-201ENST00000431116 DDX46Q7L014 1031 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms