RNA–Protein interactions for RNA: ENST00000431039.1

TTC28-202, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-202ENST00000431039 CFAP44Q96MT7 982 aa21.38■■□□□ 1.01
TTC28-202ENST00000431039 DUSP27Q5VZP5 1158 aa21.37■■□□□ 1.01
TTC28-202ENST00000431039 CHADLQ6NUI6 762 aa21.37■■□□□ 1.01
TTC28-202ENST00000431039 BABAM1Q9NWV8 329 aa21.37■■□□□ 1.01
TTC28-202ENST00000431039 ZNF277Q9NRM2 450 aaPredicted RBP21.36■■□□□ 1.01
TTC28-202ENST00000431039 KLRG2A4D1S0 409 aaPredicted RBP21.35■■□□□ 1.01
TTC28-202ENST00000431039 CHL1O00533 1208 aa21.35■■□□□ 1.01
TTC28-202ENST00000431039 HSPA1AP0DMV8 641 aaKnown RBP21.35■■□□□ 1.01
TTC28-202ENST00000431039 HSPA1BP0DMV9 641 aaKnown RBP21.35■■□□□ 1.01
TTC28-202ENST00000431039 GTF2E1P29083 439 aaPredicted RBP21.35■■□□□ 1.01
TTC28-202ENST00000431039 FKBP4Q02790 459 aaKnown RBP eCLIP21.35■■□□□ 1.01
TTC28-202ENST00000431039 ZNF541Q9H0D2 1346 aa21.34■■□□□ 1.01
TTC28-202ENST00000431039 RGL2O15211 777 aa21.34■■□□□ 1.01
TTC28-202ENST00000431039 ABCC12Q96J65 1359 aa21.34■■□□□ 1.01
TTC28-202ENST00000431039 NUTM1Q86Y26 1132 aa21.33■■□□□ 1.01
TTC28-202ENST00000431039 LAS1LQ9Y4W2 734 aaKnown RBP21.33■■□□□ 1.01
TTC28-202ENST00000431039 IQCA1LA6NCM1 817 aa21.32■■□□□ 1
TTC28-202ENST00000431039 CAPN15O75808 1086 aa21.32■■□□□ 1
TTC28-202ENST00000431039 MKRN1Q9UHC7 482 aaKnown RBP21.32■■□□□ 1
TTC28-202ENST00000431039 FANCIQ9NVI1 1328 aa21.31■■□□□ 1
TTC28-202ENST00000431039 MYL6BP14649 208 aa21.31■■□□□ 1
TTC28-202ENST00000431039 TTLL7Q6ZT98 887 aa21.31■■□□□ 1
TTC28-202ENST00000431039 RTKN2Q8IZC4 609 aa21.31■■□□□ 1
TTC28-202ENST00000431039 TNS4Q8IZW8 715 aa21.31■■□□□ 1
TTC28-202ENST00000431039 L3MBTL3Q96JM7 780 aaPredicted RBP21.31■■□□□ 1
TTC28-202ENST00000431039 TAF1DQ9H5J8 278 aaPredicted RBP21.31■■□□□ 1
TTC28-202ENST00000431039 CREBZFQ9NS37 354 aa21.31■■□□□ 1
TTC28-202ENST00000431039 MBIPQ9NS73 344 aa21.31■■□□□ 1
TTC28-202ENST00000431039 MAP3K15Q6ZN16 1313 aa21.3■■□□□ 1
TTC28-202ENST00000431039 ALDH1B1P30837 517 aa21.3■■□□□ 1
TTC28-202ENST00000431039 EIF4A1P60842 406 aaKnown RBP21.3■■□□□ 1
TTC28-202ENST00000431039 EAPPQ56P03 285 aaPredicted RBP21.3■■□□□ 1
TTC28-202ENST00000431039 KIF6Q6ZMV9 814 aa21.3■■□□□ 1
TTC28-202ENST00000431039 NYXQ9GZU5 481 aa21.3■■□□□ 1
TTC28-202ENST00000431039 GPTP24298 496 aa21.29■■□□□ 1
TTC28-202ENST00000431039 IARSP41252 1262 aaKnown RBP21.29■■□□□ 1
TTC28-202ENST00000431039 LDHDQ86WU2 507 aa21.29■■□□□ 1
TTC28-202ENST00000431039 SYNE4Q8N205 404 aa21.29■■□□□ 1
TTC28-202ENST00000431039 TSR2Q969E8 191 aaKnown RBP21.29■■□□□ 1
TTC28-202ENST00000431039 ZBTB3Q9H5J0 574 aa21.29■■□□□ 1
TTC28-202ENST00000431039 TSPYL4Q9UJ04 414 aa21.29■■□□□ 1
TTC28-202ENST00000431039 ADAMTSL1Q8N6G6 1762 aa21.28■■□□□ 1
TTC28-202ENST00000431039 ERVV-1B6SEH8 477 aa21.28■■□□□ 1
TTC28-202ENST00000431039 HACL1Q9UJ83 578 aa21.27■■□□□ 1
TTC28-202ENST00000431039 RNF123Q5XPI4 1314 aa21.27■□□□□ 0.99
TTC28-202ENST00000431039 UBN2Q6ZU65 1347 aa21.27■□□□□ 0.99
TTC28-202ENST00000431039 CRY2Q49AN0 593 aa21.26■□□□□ 0.99
TTC28-202ENST00000431039 RPGRQ92834 1020 aaKnown RBP21.26■□□□□ 0.99
TTC28-202ENST00000431039 CLEC11AQ9Y240 323 aa21.26■□□□□ 0.99
TTC28-202ENST00000431039 SNED1Q8TER0 1413 aa21.26■□□□□ 0.99
TTC28-202ENST00000431039 PASKQ96RG2 1323 aa21.26■□□□□ 0.99
TTC28-202ENST00000431039 COL4A5P29400 1685 aa21.25■□□□□ 0.99
TTC28-202ENST00000431039 ANKRD36CQ5JPF3 1778 aa21.24■□□□□ 0.99
TTC28-202ENST00000431039 FZD9O00144 591 aa21.24■□□□□ 0.99
TTC28-202ENST00000431039 CT47B1P0C2W7 299 aaPredicted RBP21.24■□□□□ 0.99
TTC28-202ENST00000431039 EPHX2P34913 555 aa21.24■□□□□ 0.99
TTC28-202ENST00000431039 EXOSC9Q06265 439 aaKnown RBP21.24■□□□□ 0.99
TTC28-202ENST00000431039 SUSD4Q5VX71 490 aa21.24■□□□□ 0.99
TTC28-202ENST00000431039 SLC51AQ86UW1 340 aa21.24■□□□□ 0.99
TTC28-202ENST00000431039 CNTNAP1P78357 1384 aa21.23■□□□□ 0.99
TTC28-202ENST00000431039 IBTKQ9P2D0 1353 aaPredicted RBP21.23■□□□□ 0.99
TTC28-202ENST00000431039 RIC1Q4ADV7 1423 aa21.23■□□□□ 0.99
TTC28-202ENST00000431039 TCERG1O14776 1098 aaKnown RBP21.23■□□□□ 0.99
TTC28-202ENST00000431039 PSMD1Q99460 953 aa21.23■□□□□ 0.99
TTC28-202ENST00000431039 LAMB2P55268 1798 aa21.23■□□□□ 0.99
TTC28-202ENST00000431039 LTBP1Q14766 1721 aa21.22■□□□□ 0.99
TTC28-202ENST00000431039 JDP2Q8WYK2 163 aa21.22■□□□□ 0.99
TTC28-202ENST00000431039 NTSR2O95665 410 aa21.21■□□□□ 0.99
TTC28-202ENST00000431039 ITGBL1O95965 494 aaPredicted RBP21.21■□□□□ 0.99
TTC28-202ENST00000431039 C3orf67Q6ZVT6 689 aa21.21■□□□□ 0.99
TTC28-202ENST00000431039 ZNF34Q8IZ26 560 aa21.21■□□□□ 0.99
TTC28-202ENST00000431039 GPC2Q8N158 579 aa21.21■□□□□ 0.99
TTC28-202ENST00000431039 GJA3Q9Y6H8 435 aa21.21■□□□□ 0.99
TTC28-202ENST00000431039 TMEM88BA6NKF7 163 aa21.2■□□□□ 0.98
TTC28-202ENST00000431039 EIF2S2P20042 333 aaKnown RBP21.2■□□□□ 0.98
TTC28-202ENST00000431039 HOXA10P31260 410 aaPredicted RBP21.2■□□□□ 0.98
TTC28-202ENST00000431039 MAP1SQ66K74 1059 aaPredicted RBP21.2■□□□□ 0.98
TTC28-202ENST00000431039 CC2D2BQ6DHV5 1058 aa21.2■□□□□ 0.98
TTC28-202ENST00000431039 GIGYF2Q6Y7W6 1299 aaKnown RBP21.2■□□□□ 0.98
TTC28-202ENST00000431039 RBM17Q96I25 401 aaKnown RBP21.2■□□□□ 0.98
TTC28-202ENST00000431039 ERBB4Q15303 1308 aa21.2■□□□□ 0.98
TTC28-202ENST00000431039 PPEF1O14829 653 aaPredicted RBP21.19■□□□□ 0.98
TTC28-202ENST00000431039 ANXA1P04083 346 aa21.19■□□□□ 0.98
TTC28-202ENST00000431039 EIF6P56537 245 aaKnown RBP21.19■□□□□ 0.98
TTC28-202ENST00000431039 C8orf58Q8NAV2 365 aa21.19■□□□□ 0.98
TTC28-202ENST00000431039 VAMP4O75379 141 aa21.18■□□□□ 0.98
TTC28-202ENST00000431039 PROSER3Q2NL68 480 aa21.18■□□□□ 0.98
TTC28-202ENST00000431039 PPP1R42Q7Z4L9 355 aa21.18■□□□□ 0.98
TTC28-202ENST00000431039 PNMA8AQ86V59 439 aaPredicted RBP21.18■□□□□ 0.98
TTC28-202ENST00000431039 LARGE2Q8N3Y3 721 aa21.18■□□□□ 0.98
TTC28-202ENST00000431039 ZNF428Q96B54 188 aa21.18■□□□□ 0.98
TTC28-202ENST00000431039 RCAN3Q9UKA8 241 aa21.18■□□□□ 0.98
TTC28-202ENST00000431039 VEGFBP49765 207 aa21.17■□□□□ 0.98
TTC28-202ENST00000431039 TWISTNBQ3B726 338 aaPredicted RBP21.17■□□□□ 0.98
TTC28-202ENST00000431039 CNTROBQ8N137 903 aa21.17■□□□□ 0.98
TTC28-202ENST00000431039 TSPYL6Q8N831 410 aa21.17■□□□□ 0.98
TTC28-202ENST00000431039 CRAMP1Q96RY5 1269 aa21.17■□□□□ 0.98
TTC28-202ENST00000431039 TAF1P21675 1872 aa21.17■□□□□ 0.98
TTC28-202ENST00000431039 TRPM7Q96QT4 1865 aa21.16■□□□□ 0.98
TTC28-202ENST00000431039 FOXN1O15353 648 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms