RNA–Protein interactions for RNA: ENST00000430710.7

CHD8-202, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD8, Length 7,420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-202ENST00000430710 A0A1B0GUA9 196 aa7.11□□□□□ -1.27
CHD8-202ENST00000430710 STAMBPO95630 424 aa7.11□□□□□ -1.27
CHD8-202ENST00000430710 TYRO3Q06418 890 aa7.11□□□□□ -1.27
CHD8-202ENST00000430710 CCDC121Q6ZUS5 278 aa7.11□□□□□ -1.27
CHD8-202ENST00000430710 B4GALNT4Q76KP1 1039 aa7.11□□□□□ -1.27
CHD8-202ENST00000430710 FAM114A1Q8IWE2 563 aa7.11□□□□□ -1.27
CHD8-202ENST00000430710 PPM1EQ8WY54 764 aa7.11□□□□□ -1.27
CHD8-202ENST00000430710 RSRC1Q96IZ7 334 aaKnown RBP7.11□□□□□ -1.27
CHD8-202ENST00000430710 ZSWIM4Q9H7M6 989 aa7.11□□□□□ -1.27
CHD8-202ENST00000430710 RAD54L2Q9Y4B4 1467 aa7.11□□□□□ -1.27
CHD8-202ENST00000430710 A6NNZ2 444 aa7.11□□□□□ -1.27
CHD8-202ENST00000430710 FKBP4Q02790 459 aaKnown RBP eCLIP7.11□□□□□ -1.27
CHD8-202ENST00000430710 IFI16Q16666 785 aaKnown RBP7.11□□□□□ -1.27
CHD8-202ENST00000430710 TUBB8Q3ZCM7 444 aa7.11□□□□□ -1.27
CHD8-202ENST00000430710 PIBF1Q8WXW3 757 aa7.11□□□□□ -1.27
CHD8-202ENST00000430710 SSR1P43307 286 aaKnown RBP7.11□□□□□ -1.27
CHD8-202ENST00000430710 ZNF445P59923 1031 aa7.11□□□□□ -1.27
CHD8-202ENST00000430710 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.11□□□□□ -1.27
CHD8-202ENST00000430710 CPLX3Q8WVH0 158 aa7.11□□□□□ -1.27
CHD8-202ENST00000430710 EVI5LQ96CN4 794 aa7.11□□□□□ -1.27
CHD8-202ENST00000430710 CNPY2Q9Y2B0 182 aa7.11□□□□□ -1.27
CHD8-202ENST00000430710 VTI1AQ96AJ9 217 aa7.1□□□□□ -1.27
CHD8-202ENST00000430710 GSTTP1A0A1W2PQM5 241 aa7.1□□□□□ -1.27
CHD8-202ENST00000430710 GOLIM4O00461 696 aa7.1□□□□□ -1.27
CHD8-202ENST00000430710 MAP3K9P80192 1104 aa7.1□□□□□ -1.27
CHD8-202ENST00000430710 CCDC102BQ68D86 513 aa7.1□□□□□ -1.27
CHD8-202ENST00000430710 INTS4Q96HW7 963 aaKnown RBP7.1□□□□□ -1.27
CHD8-202ENST00000430710 TMEM132AQ24JP5 1023 aa7.1□□□□□ -1.27
CHD8-202ENST00000430710 CEP63Q96MT8 703 aa7.1□□□□□ -1.27
CHD8-202ENST00000430710 BIN1O00499 593 aa7.1□□□□□ -1.27
CHD8-202ENST00000430710 CYLC1P35663 651 aaPredicted RBP7.1□□□□□ -1.27
CHD8-202ENST00000430710 CCDC155Q8N6L0 562 aa7.1□□□□□ -1.27
CHD8-202ENST00000430710 KCNG4Q8TDN1 519 aa7.1□□□□□ -1.27
CHD8-202ENST00000430710 POTEJP0CG39 1038 aa7.1□□□□□ -1.27
CHD8-202ENST00000430710 SYT1P21579 422 aa7.1□□□□□ -1.27
CHD8-202ENST00000430710 PTGS1P23219 599 aa7.1□□□□□ -1.27
CHD8-202ENST00000430710 CEP57Q86XR8 500 aa7.1□□□□□ -1.27
CHD8-202ENST00000430710 ATRIPQ8WXE1 791 aa7.1□□□□□ -1.27
CHD8-202ENST00000430710 DDX12PQ92771 950 aa7.1□□□□□ -1.27
CHD8-202ENST00000430710 SLC52A1Q9NWF4 448 aa7.1□□□□□ -1.27
CHD8-202ENST00000430710 SYNJ2O15056 1496 aa7.1□□□□□ -1.27
CHD8-202ENST00000430710 IGSF3O75054 1194 aa7.09□□□□□ -1.27
CHD8-202ENST00000430710 DESP17661 470 aa7.09□□□□□ -1.27
CHD8-202ENST00000430710 LIG1P18858 919 aa7.09□□□□□ -1.27
CHD8-202ENST00000430710 TDRD12Q587J7 1177 aaKnown RBP7.09□□□□□ -1.27
CHD8-202ENST00000430710 RALGAPBQ86X10 1494 aa7.09□□□□□ -1.27
CHD8-202ENST00000430710 POTEDQ86YR6 584 aa7.09□□□□□ -1.27
CHD8-202ENST00000430710 ARFGAP2Q8N6H7 521 aa7.09□□□□□ -1.27
CHD8-202ENST00000430710 PRAM1Q96QH2 718 aa7.09□□□□□ -1.27
CHD8-202ENST00000430710 GUCY1B3Q02153 619 aa7.09□□□□□ -1.27
CHD8-202ENST00000430710 STMN4Q9H169 189 aaPredicted RBP7.09□□□□□ -1.27
CHD8-202ENST00000430710 CEP126Q9P2H0 1117 aa7.09□□□□□ -1.27
CHD8-202ENST00000430710 F13A1P00488 732 aa7.09□□□□□ -1.27
CHD8-202ENST00000430710 CCDC50Q8IVM0 306 aa7.09□□□□□ -1.27
CHD8-202ENST00000430710 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.09□□□□□ -1.271e-6■□□□□ 9.7
CHD8-202ENST00000430710 VGLL3A8MV65 326 aa7.09□□□□□ -1.27
CHD8-202ENST00000430710 WWC2Q6AWC2 1192 aa7.09□□□□□ -1.27
CHD8-202ENST00000430710 FAM76AQ8TAV0 307 aa7.09□□□□□ -1.27
CHD8-202ENST00000430710 ASXL1Q8IXJ9 1541 aa7.09□□□□□ -1.27
CHD8-202ENST00000430710 RIOK3O14730 519 aaKnown RBP7.09□□□□□ -1.27
CHD8-202ENST00000430710 U2AF2P26368 475 aaKnown RBP eCLIP7.09□□□□□ -1.277e-7■■■■□ 22.2
CHD8-202ENST00000430710 SYKP43405 635 aa7.09□□□□□ -1.27
CHD8-202ENST00000430710 ATP2B2Q01814 1243 aa7.09□□□□□ -1.27
CHD8-202ENST00000430710 TUBB2AQ13885 445 aa7.09□□□□□ -1.27
CHD8-202ENST00000430710 TUBB2BQ9BVA1 445 aa7.09□□□□□ -1.27
CHD8-202ENST00000430710 CABP4P57796 275 aa7.09□□□□□ -1.28
CHD8-202ENST00000430710 CCDC6Q16204 474 aa7.09□□□□□ -1.28
CHD8-202ENST00000430710 CCDC114Q96M63 670 aa7.09□□□□□ -1.28
CHD8-202ENST00000430710 CDK19Q9BWU1 502 aa7.09□□□□□ -1.28
CHD8-202ENST00000430710 CUL7Q14999 1698 aa7.08□□□□□ -1.28
CHD8-202ENST00000430710 MAPKBP1O60336 1514 aa7.08□□□□□ -1.28
CHD8-202ENST00000430710 KIF5BP33176 963 aa7.08□□□□□ -1.28
CHD8-202ENST00000430710 MTIF2P46199 727 aaKnown RBP7.08□□□□□ -1.28
CHD8-202ENST00000430710 SSRP1Q08945 709 aaKnown RBP7.08□□□□□ -1.28
CHD8-202ENST00000430710 ZNF530Q6P9A1 599 aaPredicted RBP7.08□□□□□ -1.28
CHD8-202ENST00000430710 AFAP1Q8N556 730 aa7.08□□□□□ -1.28
CHD8-202ENST00000430710 FBF1Q8TES7 1133 aa7.08□□□□□ -1.28
CHD8-202ENST00000430710 GTF3C6Q969F1 213 aa7.08□□□□□ -1.28
CHD8-202ENST00000430710 DACT1Q9NYF0 836 aa7.08□□□□□ -1.28
CHD8-202ENST00000430710 PCDHB15Q9Y5E8 787 aa7.08□□□□□ -1.28
CHD8-202ENST00000430710 CAMSAP2Q08AD1 1489 aa7.08□□□□□ -1.28
CHD8-202ENST00000430710 SSBP05455 408 aaKnown RBP eCLIP7.08□□□□□ -1.286e-9■■■■□ 22.6
CHD8-202ENST00000430710 UBE4AQ14139 1066 aa7.08□□□□□ -1.28
CHD8-202ENST00000430710 CCDC129Q6ZRS4 1044 aa7.08□□□□□ -1.28
CHD8-202ENST00000430710 TFCP2L1Q9NZI6 479 aa7.08□□□□□ -1.28
CHD8-202ENST00000430710 SPG7Q9UQ90 795 aa7.08□□□□□ -1.28
CHD8-202ENST00000430710 FSD2A1L4K1 749 aa7.08□□□□□ -1.28
CHD8-202ENST00000430710 ZPR1O75312 459 aa7.08□□□□□ -1.28
CHD8-202ENST00000430710 SDSP20132 328 aa7.08□□□□□ -1.28
CHD8-202ENST00000430710 SARNPP82979 210 aaKnown RBP7.08□□□□□ -1.28
CHD8-202ENST00000430710 RBM26Q5T8P6 1007 aaKnown RBP7.08□□□□□ -1.28
CHD8-202ENST00000430710 AOPEPQ8N6M6 819 aa7.08□□□□□ -1.28
CHD8-202ENST00000430710 RAB34Q9BZG1 259 aa7.08□□□□□ -1.28
CHD8-202ENST00000430710 DNAJC25Q9H1X3 360 aa7.08□□□□□ -1.28
CHD8-202ENST00000430710 HYPKQ9NX55 129 aa7.08□□□□□ -1.28
CHD8-202ENST00000430710 SPAG1Q07617 926 aa7.08□□□□□ -1.28
CHD8-202ENST00000430710 PUS7Q96PZ0 661 aaKnown RBP7.08□□□□□ -1.28
CHD8-202ENST00000430710 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.08□□□□□ -1.283e-6■□□□□ 9.1
CHD8-202ENST00000430710 SELENOOQ9BVL4 669 aa7.08□□□□□ -1.28
CHD8-202ENST00000430710 ZMYM3Q14202 1370 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms