RNA–Protein interactions for RNA: ENST00000429136.5

ATP13A3-202, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-202ENST00000429136 TTC39AQ5SRH9 613 aa6.42□□□□□ -1.38
ATP13A3-202ENST00000429136 PI4K2BQ8TCG2 481 aa6.42□□□□□ -1.38
ATP13A3-202ENST00000429136 LMBRD1Q9NUN5 540 aa6.42□□□□□ -1.38
ATP13A3-202ENST00000429136 C1orf167Q5SNV9 1468 aa6.42□□□□□ -1.38
ATP13A3-202ENST00000429136 PEAK1Q9H792 1746 aa6.42□□□□□ -1.38
ATP13A3-202ENST00000429136 ADCY9O60503 1353 aa6.41□□□□□ -1.38
ATP13A3-202ENST00000429136 GJB2P29033 226 aa6.41□□□□□ -1.38
ATP13A3-202ENST00000429136 IL15P40933 162 aaPredicted RBP6.41□□□□□ -1.38
ATP13A3-202ENST00000429136 CCDC183Q5T5S1 534 aa6.41□□□□□ -1.38
ATP13A3-202ENST00000429136 CREB3L3Q68CJ9 461 aa6.41□□□□□ -1.38
ATP13A3-202ENST00000429136 CPLX2Q6PUV4 134 aaKnown RBP6.41□□□□□ -1.38
ATP13A3-202ENST00000429136 LRSAM1Q6UWE0 723 aa6.41□□□□□ -1.38
ATP13A3-202ENST00000429136 LMBR1LQ6UX01 489 aa6.41□□□□□ -1.38
ATP13A3-202ENST00000429136 BICD2Q8TD16 824 aa6.41□□□□□ -1.38
ATP13A3-202ENST00000429136 DLG5Q8TDM6 1919 aa6.41□□□□□ -1.38
ATP13A3-202ENST00000429136 TRDNQ13061 729 aa6.41□□□□□ -1.38
ATP13A3-202ENST00000429136 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.41□□□□□ -1.38
ATP13A3-202ENST00000429136 RALYLQ86SE5 291 aaKnown RBP6.41□□□□□ -1.38
ATP13A3-202ENST00000429136 ZBTB3Q9H5J0 574 aa6.41□□□□□ -1.38
ATP13A3-202ENST00000429136 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.41□□□□□ -1.38
ATP13A3-202ENST00000429136 CTNNA3Q9UI47 895 aa6.41□□□□□ -1.38
ATP13A3-202ENST00000429136 AXIN2Q9Y2T1 843 aa6.41□□□□□ -1.38
ATP13A3-202ENST00000429136 IFIT1P09914 478 aaKnown RBP6.41□□□□□ -1.38
ATP13A3-202ENST00000429136 UBE2HP62256 183 aa6.41□□□□□ -1.38
ATP13A3-202ENST00000429136 GLIPR1L2Q4G1C9 344 aa6.41□□□□□ -1.38
ATP13A3-202ENST00000429136 HSP90AB3PQ58FF7 597 aa6.41□□□□□ -1.38
ATP13A3-202ENST00000429136 ZSCAN30Q86W11 494 aa6.41□□□□□ -1.38
ATP13A3-202ENST00000429136 SYTL4Q96C24 671 aaPredicted RBP6.41□□□□□ -1.38
ATP13A3-202ENST00000429136 LSG1Q9H089 658 aaKnown RBP6.41□□□□□ -1.38
ATP13A3-202ENST00000429136 RBM27Q9P2N5 1060 aaKnown RBP6.41□□□□□ -1.38
ATP13A3-202ENST00000429136 XRN1Q8IZH2 1706 aaKnown RBP6.41□□□□□ -1.38
ATP13A3-202ENST00000429136 PIK3C2AO00443 1686 aa6.4□□□□□ -1.38
ATP13A3-202ENST00000429136 GNL2Q13823 731 aaKnown RBP6.4□□□□□ -1.38
ATP13A3-202ENST00000429136 TNNI3KQ59H18 835 aa6.4□□□□□ -1.38
ATP13A3-202ENST00000429136 RUFY3Q7L099 469 aa6.4□□□□□ -1.38
ATP13A3-202ENST00000429136 JARID2Q92833 1246 aaPredicted RBP6.4□□□□□ -1.38
ATP13A3-202ENST00000429136 EAF2Q96CJ1 260 aaPredicted RBP6.4□□□□□ -1.38
ATP13A3-202ENST00000429136 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.4□□□□□ -1.38
ATP13A3-202ENST00000429136 COPRSQ9NQ92 184 aa6.4□□□□□ -1.38
ATP13A3-202ENST00000429136 FPGT-TNNI3KV9GXZ4 949 aa6.4□□□□□ -1.38
ATP13A3-202ENST00000429136 FMN2Q9NZ56 1722 aa6.4□□□□□ -1.38
ATP13A3-202ENST00000429136 SALL3Q9BXA9 1300 aa6.4□□□□□ -1.38
ATP13A3-202ENST00000429136 ERVV-2B6SEH9 535 aa6.4□□□□□ -1.38
ATP13A3-202ENST00000429136 CPLX1O14810 134 aa6.4□□□□□ -1.38
ATP13A3-202ENST00000429136 F13A1P00488 732 aa6.4□□□□□ -1.38
ATP13A3-202ENST00000429136 PIP4K2AP48426 406 aaPredicted RBP6.4□□□□□ -1.38
ATP13A3-202ENST00000429136 TFCP2Q12800 502 aa6.4□□□□□ -1.38
ATP13A3-202ENST00000429136 STK3Q13188 491 aa6.4□□□□□ -1.38
ATP13A3-202ENST00000429136 SF3A1Q15459 793 aaKnown RBP6.4□□□□□ -1.38
ATP13A3-202ENST00000429136 ZSCAN25Q6NSZ9 544 aa6.4□□□□□ -1.38
ATP13A3-202ENST00000429136 DRC7Q8IY82 874 aa6.4□□□□□ -1.38
ATP13A3-202ENST00000429136 DDX17Q92841 729 aaKnown RBP6.4□□□□□ -1.38
ATP13A3-202ENST00000429136 NEK1Q96PY6 1258 aa6.4□□□□□ -1.38
ATP13A3-202ENST00000429136 USP16Q9Y5T5 823 aa6.4□□□□□ -1.38
ATP13A3-202ENST00000429136 USP42Q9H9J4 1324 aaKnown RBP6.4□□□□□ -1.38
ATP13A3-202ENST00000429136 NALCNQ8IZF0 1738 aa6.4□□□□□ -1.39
ATP13A3-202ENST00000429136 PRAMEF22A3QJZ6 481 aa6.4□□□□□ -1.39
ATP13A3-202ENST00000429136 ATP5JP18859 108 aa6.4□□□□□ -1.39
ATP13A3-202ENST00000429136 MCMDC2Q4G0Z9 681 aa6.4□□□□□ -1.39
ATP13A3-202ENST00000429136 LARP6Q9BRS8 491 aaKnown RBP6.4□□□□□ -1.39
ATP13A3-202ENST00000429136 SCAND2PQ9GZW5 306 aaPredicted RBP6.4□□□□□ -1.39
ATP13A3-202ENST00000429136 TBC1D2BQ9UPU7 963 aa6.4□□□□□ -1.39
ATP13A3-202ENST00000429136 SETD1BQ9UPS6 1966 aaKnown RBP6.39□□□□□ -1.39
ATP13A3-202ENST00000429136 DHX16O60231 1041 aaKnown RBP6.39□□□□□ -1.39
ATP13A3-202ENST00000429136 CCDC192P0DO97 292 aa6.39□□□□□ -1.39
ATP13A3-202ENST00000429136 CLCN1P35523 988 aa6.39□□□□□ -1.39
ATP13A3-202ENST00000429136 CHAF1AQ13111 956 aaPredicted RBP6.39□□□□□ -1.39
ATP13A3-202ENST00000429136 IFIT5Q13325 482 aaKnown RBP6.39□□□□□ -1.39
ATP13A3-202ENST00000429136 PKP1Q13835 747 aa6.39□□□□□ -1.39
ATP13A3-202ENST00000429136 CCDC191Q8NCU4 936 aa6.39□□□□□ -1.39
ATP13A3-202ENST00000429136 GDPD2Q9HCC8 539 aa6.39□□□□□ -1.39
ATP13A3-202ENST00000429136 CNNM1Q9NRU3 951 aa6.39□□□□□ -1.39
ATP13A3-202ENST00000429136 GOLIM4O00461 696 aa6.39□□□□□ -1.39
ATP13A3-202ENST00000429136 SLC27A2O14975 620 aa6.39□□□□□ -1.39
ATP13A3-202ENST00000429136 SYT1P21579 422 aa6.39□□□□□ -1.39
ATP13A3-202ENST00000429136 HSPA2P54652 639 aa6.39□□□□□ -1.39
ATP13A3-202ENST00000429136 FKBP4Q02790 459 aaKnown RBP eCLIP6.39□□□□□ -1.39
ATP13A3-202ENST00000429136 SASS6Q6UVJ0 657 aa6.39□□□□□ -1.39
ATP13A3-202ENST00000429136 CCDC73Q6ZRK6 1079 aa6.39□□□□□ -1.39
ATP13A3-202ENST00000429136 USP48Q86UV5 1035 aa6.39□□□□□ -1.39
ATP13A3-202ENST00000429136 ZNF396Q96N95 335 aaPredicted RBP6.39□□□□□ -1.39
ATP13A3-202ENST00000429136 CFAP45Q9UL16 551 aa6.39□□□□□ -1.39
ATP13A3-202ENST00000429136 SPATA31A3Q5VYP0 1347 aa6.39□□□□□ -1.39
ATP13A3-202ENST00000429136 TNS3Q68CZ2 1445 aa6.39□□□□□ -1.39
ATP13A3-202ENST00000429136 NRDCO43847 1150 aa6.39□□□□□ -1.39
ATP13A3-202ENST00000429136 APPP05067 770 aa6.39□□□□□ -1.39
ATP13A3-202ENST00000429136 CYP2E1P05181 493 aaPredicted RBP6.39□□□□□ -1.39
ATP13A3-202ENST00000429136 HMGN5P82970 282 aaKnown RBP6.39□□□□□ -1.39
ATP13A3-202ENST00000429136 DDX46Q7L014 1031 aaKnown RBP6.39□□□□□ -1.39
ATP13A3-202ENST00000429136 KLHDC4Q8TBB5 520 aa6.39□□□□□ -1.39
ATP13A3-202ENST00000429136 SPATA32Q96LK8 384 aa6.39□□□□□ -1.39
ATP13A3-202ENST00000429136 FAM227BQ96M60 508 aa6.39□□□□□ -1.39
ATP13A3-202ENST00000429136 ZSWIM6Q9HCJ5 1215 aa6.39□□□□□ -1.39
ATP13A3-202ENST00000429136 TPM3P06753 285 aa6.38□□□□□ -1.39
ATP13A3-202ENST00000429136 ZFYP08048 801 aaPredicted RBP6.38□□□□□ -1.39
ATP13A3-202ENST00000429136 PRIM1P49642 420 aaKnown RBP6.38□□□□□ -1.39
ATP13A3-202ENST00000429136 UVSSAQ2YD98 709 aa6.38□□□□□ -1.39
ATP13A3-202ENST00000429136 METTL24Q5JXM2 366 aa6.38□□□□□ -1.39
ATP13A3-202ENST00000429136 GOLGA6L19H0YKK7 550 aa6.38□□□□□ -1.39
ATP13A3-202ENST00000429136 SASH1O94885 1247 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms