RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 ZC3H6P61129 1189 aaKnown RBP14.84□□□□□ -0.03
CDH3-202ENST00000429102 STK11IPQ8N1F8 1099 aa14.84□□□□□ -0.03
CDH3-202ENST00000429102 EIF4A1P60842 406 aaKnown RBP14.83□□□□□ -0.04
CDH3-202ENST00000429102 MAP3K11Q16584 847 aa14.83□□□□□ -0.04
CDH3-202ENST00000429102 DDX46Q7L014 1031 aaKnown RBP14.83□□□□□ -0.04
CDH3-202ENST00000429102 ZNF589Q86UQ0 364 aaPredicted RBP14.83□□□□□ -0.04
CDH3-202ENST00000429102 SUCLG2Q96I99 432 aa14.83□□□□□ -0.04
CDH3-202ENST00000429102 FAM184AQ8NB25 1140 aa14.83□□□□□ -0.04
CDH3-202ENST00000429102 MCM5P33992 734 aa14.82□□□□□ -0.04
CDH3-202ENST00000429102 TYRO3Q06418 890 aa14.82□□□□□ -0.04
CDH3-202ENST00000429102 ARID5BQ14865 1188 aa14.82□□□□□ -0.04
CDH3-202ENST00000429102 KCNF1Q9H3M0 494 aa14.82□□□□□ -0.04
CDH3-202ENST00000429102 BCL2L12Q9HB09 334 aa14.82□□□□□ -0.04
CDH3-202ENST00000429102 TCHHQ07283 1943 aa14.82□□□□□ -0.04
CDH3-202ENST00000429102 ISM2Q6H9L7 571 aa14.82□□□□□ -0.04
CDH3-202ENST00000429102 IGSF1Q8N6C5 1336 aa14.82□□□□□ -0.04
CDH3-202ENST00000429102 DLG5Q8TDM6 1919 aa14.82□□□□□ -0.04
CDH3-202ENST00000429102 USP6P35125 1406 aa14.82□□□□□ -0.04
CDH3-202ENST00000429102 ST3GAL1Q11201 340 aa14.81□□□□□ -0.04
CDH3-202ENST00000429102 MYRIPQ8NFW9 859 aa14.81□□□□□ -0.04
CDH3-202ENST00000429102 MAP3K5Q99683 1374 aa14.81□□□□□ -0.04
CDH3-202ENST00000429102 NR1I2O75469 434 aa14.81□□□□□ -0.04
CDH3-202ENST00000429102 ZNF710Q8N1W2 664 aa14.81□□□□□ -0.04
CDH3-202ENST00000429102 SLC27A2O14975 620 aa14.8□□□□□ -0.04
CDH3-202ENST00000429102 ATP2B3Q16720 1220 aa14.8□□□□□ -0.04
CDH3-202ENST00000429102 MYD88Q99836 296 aa14.8□□□□□ -0.04
CDH3-202ENST00000429102 CCDC171Q6TFL3 1326 aa14.8□□□□□ -0.04
CDH3-202ENST00000429102 RIMS1Q86UR5 1692 aaKnown RBP14.8□□□□□ -0.04
CDH3-202ENST00000429102 TPD52L1Q16890 204 aaPredicted RBP14.8□□□□□ -0.04
CDH3-202ENST00000429102 HSP90AB4PQ58FF6 505 aa14.8□□□□□ -0.04
CDH3-202ENST00000429102 TSPOAP1O95153 1857 aa14.8□□□□□ -0.04
CDH3-202ENST00000429102 CEP170BQ9Y4F5 1589 aaPredicted RBP14.8□□□□□ -0.04
CDH3-202ENST00000429102 SBNO1A3KN83 1393 aa14.8□□□□□ -0.04
CDH3-202ENST00000429102 PDCL2Q8N4E4 241 aa14.8□□□□□ -0.04
CDH3-202ENST00000429102 BRF1Q92994 677 aa14.8□□□□□ -0.04
CDH3-202ENST00000429102 NCOA5Q9HCD5 579 aaKnown RBP14.79□□□□□ -0.04
CDH3-202ENST00000429102 NEO1Q92859 1461 aa14.79□□□□□ -0.04
CDH3-202ENST00000429102 TNRQ92752 1358 aa14.79□□□□□ -0.04
CDH3-202ENST00000429102 SASH1O94885 1247 aa14.79□□□□□ -0.04
CDH3-202ENST00000429102 ZNF165P49910 485 aa14.79□□□□□ -0.04
CDH3-202ENST00000429102 CBX8Q9HC52 389 aa14.79□□□□□ -0.04
CDH3-202ENST00000429102 GOLGA6L6A8MZA4 724 aa14.79□□□□□ -0.04
CDH3-202ENST00000429102 HSP90AB3PQ58FF7 597 aa14.79□□□□□ -0.04
CDH3-202ENST00000429102 OTUD7BQ6GQQ9 843 aa14.79□□□□□ -0.04
CDH3-202ENST00000429102 MAP7D2Q96T17 732 aa14.79□□□□□ -0.04
CDH3-202ENST00000429102 KIF20BQ96Q89 1820 aa14.79□□□□□ -0.04
CDH3-202ENST00000429102 DBF4Q9UBU7 674 aaPredicted RBP14.78□□□□□ -0.04
CDH3-202ENST00000429102 BECN2A8MW95 431 aa14.78□□□□□ -0.04
CDH3-202ENST00000429102 POLA2Q14181 598 aa14.78□□□□□ -0.04
CDH3-202ENST00000429102 PTPN21Q16825 1174 aa14.78□□□□□ -0.04
CDH3-202ENST00000429102 EVI5LQ96CN4 794 aa14.78□□□□□ -0.04
CDH3-202ENST00000429102 GOLGA6L19H0YKK7 550 aa14.78□□□□□ -0.04
CDH3-202ENST00000429102 VPS53Q5VIR6 699 aa14.78□□□□□ -0.04
CDH3-202ENST00000429102 BIN1O00499 593 aa14.77□□□□□ -0.04
CDH3-202ENST00000429102 LETM1O95202 739 aaPredicted RBP14.77□□□□□ -0.04
CDH3-202ENST00000429102 NLRP2Q9NX02 1062 aa14.77□□□□□ -0.04
CDH3-202ENST00000429102 CSB-PGBD3P0DP91 1061 aa14.77□□□□□ -0.05
CDH3-202ENST00000429102 UVSSAQ2YD98 709 aa14.77□□□□□ -0.05
CDH3-202ENST00000429102 Q6ZUG5 572 aa14.77□□□□□ -0.05
CDH3-202ENST00000429102 UBE3BQ7Z3V4 1068 aa14.77□□□□□ -0.05
CDH3-202ENST00000429102 MRVI1Q9Y6F6 885 aa14.77□□□□□ -0.05
CDH3-202ENST00000429102 TNNT1P13805 278 aa14.77□□□□□ -0.05
CDH3-202ENST00000429102 EPHA10Q5JZY3 1008 aa14.77□□□□□ -0.05
CDH3-202ENST00000429102 COPS6Q7L5N1 327 aa14.77□□□□□ -0.05
CDH3-202ENST00000429102 ZSWIM6Q9HCJ5 1215 aa14.77□□□□□ -0.05
CDH3-202ENST00000429102 CLIP2Q9UDT6 1046 aa14.77□□□□□ -0.05
CDH3-202ENST00000429102 USP16Q9Y5T5 823 aa14.77□□□□□ -0.05
CDH3-202ENST00000429102 PREX1Q8TCU6 1659 aa14.77□□□□□ -0.05
CDH3-202ENST00000429102 DLC1Q96QB1 1528 aa14.77□□□□□ -0.05
CDH3-202ENST00000429102 A0A0G2JLW4 131 aa14.76□□□□□ -0.05
CDH3-202ENST00000429102 GRM8O00222 908 aa14.76□□□□□ -0.05
CDH3-202ENST00000429102 HMGN5P82970 282 aaKnown RBP14.76□□□□□ -0.05
CDH3-202ENST00000429102 RNF20Q5VTR2 975 aa14.76□□□□□ -0.05
CDH3-202ENST00000429102 FAM200AQ8TCP9 573 aa14.76□□□□□ -0.05
CDH3-202ENST00000429102 SNRKQ9NRH2 765 aa14.76□□□□□ -0.05
CDH3-202ENST00000429102 ARHGEF10O15013 1369 aa14.76□□□□□ -0.05
CDH3-202ENST00000429102 TMEM2Q9UHN6 1383 aa14.76□□□□□ -0.05
CDH3-202ENST00000429102 HAND2P61296 217 aa14.76□□□□□ -0.05
CDH3-202ENST00000429102 NECTIN1Q15223 517 aa14.75□□□□□ -0.05
CDH3-202ENST00000429102 XAGE3Q8WTP9 111 aa14.75□□□□□ -0.05
CDH3-202ENST00000429102 ZSCAN31Q96LW9 406 aaPredicted RBP14.75□□□□□ -0.05
CDH3-202ENST00000429102 PSMA5P28066 241 aa14.75□□□□□ -0.05
CDH3-202ENST00000429102 KIAA1524Q8TCG1 905 aa14.75□□□□□ -0.05
CDH3-202ENST00000429102 CCDC94Q9BW85 323 aaPredicted RBP14.75□□□□□ -0.05
CDH3-202ENST00000429102 PHF8Q9UPP1 1060 aa14.75□□□□□ -0.05
CDH3-202ENST00000429102 ME1P48163 572 aa14.75□□□□□ -0.05
CDH3-202ENST00000429102 GORABQ5T7V8 394 aa14.75□□□□□ -0.05
CDH3-202ENST00000429102 LEO1Q8WVC0 666 aaPredicted RBP14.75□□□□□ -0.05
CDH3-202ENST00000429102 SH2B1Q9NRF2 756 aaPredicted RBP14.75□□□□□ -0.05
CDH3-202ENST00000429102 APOBRQ0VD83 1088 aa14.74□□□□□ -0.05
CDH3-202ENST00000429102 TFCP2Q12800 502 aa14.74□□□□□ -0.05
CDH3-202ENST00000429102 PLEKHO1Q53GL0 409 aaPredicted RBP14.74□□□□□ -0.05
CDH3-202ENST00000429102 POLR3DP05423 398 aaPredicted RBP14.74□□□□□ -0.05
CDH3-202ENST00000429102 TIMM10P62072 90 aa14.74□□□□□ -0.05
CDH3-202ENST00000429102 NEXNQ0ZGT2 675 aa14.74□□□□□ -0.05
CDH3-202ENST00000429102 HSP90AA4PQ58FG1 418 aa14.74□□□□□ -0.05
CDH3-202ENST00000429102 KSR2Q6VAB6 950 aa14.74□□□□□ -0.05
CDH3-202ENST00000429102 ZNF771Q7L3S4 317 aaPredicted RBP14.74□□□□□ -0.05
CDH3-202ENST00000429102 NFATC2IPQ8NCF5 419 aa14.74□□□□□ -0.05
CDH3-202ENST00000429102 DBNDD2Q9BQY9 259 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms