RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 LRP10Q7Z4F1 713 aa14.02□□□□□ -0.16
FIRRE-201ENST00000427391 TCEANC2Q96MN5 208 aa14.02□□□□□ -0.16
FIRRE-201ENST00000427391 ISY1Q9ULR0 285 aaKnown RBP14.02□□□□□ -0.16
FIRRE-201ENST00000427391 IL17RAQ96F46 866 aa14.02□□□□□ -0.17
FIRRE-201ENST00000427391 INTS4Q96HW7 963 aaKnown RBP14.02□□□□□ -0.17
FIRRE-201ENST00000427391 METTL22Q9BUU2 404 aaPredicted RBP14.02□□□□□ -0.17
FIRRE-201ENST00000427391 UTYO14607 1347 aa14.02□□□□□ -0.17
FIRRE-201ENST00000427391 A0A0D9SFI3 127 aa14.01□□□□□ -0.17
FIRRE-201ENST00000427391 ERC1Q8IUD2 1116 aa14.01□□□□□ -0.17
FIRRE-201ENST00000427391 GPATCH3Q96I76 525 aa14.01□□□□□ -0.17
FIRRE-201ENST00000427391 SNRPA1P09661 255 aaKnown RBP14.01□□□□□ -0.17
FIRRE-201ENST00000427391 CABP4P57796 275 aa14.01□□□□□ -0.17
FIRRE-201ENST00000427391 ZNF445P59923 1031 aa14.01□□□□□ -0.17
FIRRE-201ENST00000427391 CCDC83Q8IWF9 413 aa14.01□□□□□ -0.17
FIRRE-201ENST00000427391 RPAP1Q9BWH6 1393 aaPredicted RBP14.01□□□□□ -0.17
FIRRE-201ENST00000427391 HOMEZQ8IX15 550 aa14□□□□□ -0.17
FIRRE-201ENST00000427391 EVI5LQ96CN4 794 aa14□□□□□ -0.17
FIRRE-201ENST00000427391 RBM8AQ9Y5S9 174 aaKnown RBP14□□□□□ -0.17
FIRRE-201ENST00000427391 TCHHQ07283 1943 aa14□□□□□ -0.17
FIRRE-201ENST00000427391 SCN11AQ9UI33 1791 aa14□□□□□ -0.17
FIRRE-201ENST00000427391 KIF1AQ12756 1690 aa14□□□□□ -0.17
FIRRE-201ENST00000427391 KCNJ4P48050 445 aa14□□□□□ -0.17
FIRRE-201ENST00000427391 NECAB1Q8N987 351 aa14□□□□□ -0.17
FIRRE-201ENST00000427391 DCAF5Q96JK2 942 aa14□□□□□ -0.17
FIRRE-201ENST00000427391 FSD1Q9BTV5 496 aa14□□□□□ -0.17
FIRRE-201ENST00000427391 CCDC171Q6TFL3 1326 aa13.99□□□□□ -0.17
FIRRE-201ENST00000427391 TULP1O00294 542 aaPredicted RBP13.99□□□□□ -0.17
FIRRE-201ENST00000427391 RNF214Q8ND24 703 aa13.99□□□□□ -0.17
FIRRE-201ENST00000427391 ADAMTS7Q9UKP4 1686 aa13.99□□□□□ -0.17
FIRRE-201ENST00000427391 TFCP2Q12800 502 aa13.99□□□□□ -0.17
FIRRE-201ENST00000427391 ZNF589Q86UQ0 364 aaPredicted RBP13.99□□□□□ -0.17
FIRRE-201ENST00000427391 RUFY2Q8WXA3 655 aa13.99□□□□□ -0.17
FIRRE-201ENST00000427391 TRIM44Q96DX7 344 aaPredicted RBP13.99□□□□□ -0.17
FIRRE-201ENST00000427391 FMNL2Q96PY5 1086 aa13.99□□□□□ -0.17
FIRRE-201ENST00000427391 LIMCH1Q9UPQ0 1083 aa13.99□□□□□ -0.17
FIRRE-201ENST00000427391 CRYBG1Q9Y4K1 1723 aa13.99□□□□□ -0.17
FIRRE-201ENST00000427391 A0A087WZG4 1122 aa13.98□□□□□ -0.17
FIRRE-201ENST00000427391 ESPNB1AK53 854 aa13.98□□□□□ -0.17
FIRRE-201ENST00000427391 CNPY2Q9Y2B0 182 aa13.98□□□□□ -0.17
FIRRE-201ENST00000427391 COL18A1P39060 1754 aa13.98□□□□□ -0.17
FIRRE-201ENST00000427391 TTLL7Q6ZT98 887 aa13.98□□□□□ -0.17
FIRRE-201ENST00000427391 USP48Q86UV5 1035 aa13.98□□□□□ -0.17
FIRRE-201ENST00000427391 PDRG1Q9NUG6 133 aa13.98□□□□□ -0.17
FIRRE-201ENST00000427391 DBNLQ9UJU6 430 aaKnown RBP13.98□□□□□ -0.17
FIRRE-201ENST00000427391 CHMP3Q9Y3E7 222 aa13.98□□□□□ -0.17
FIRRE-201ENST00000427391 SPATA31A3Q5VYP0 1347 aa13.98□□□□□ -0.17
FIRRE-201ENST00000427391 NBPF26B4DH59 902 aa13.97□□□□□ -0.17
FIRRE-201ENST00000427391 SYT1P21579 422 aa13.97□□□□□ -0.17
FIRRE-201ENST00000427391 PTPN12Q05209 780 aaKnown RBP13.97□□□□□ -0.17
FIRRE-201ENST00000427391 ST3GAL1Q11201 340 aa13.97□□□□□ -0.17
FIRRE-201ENST00000427391 NECTIN1Q15223 517 aa13.97□□□□□ -0.17
FIRRE-201ENST00000427391 NBPF14Q5TI25 921 aa13.97□□□□□ -0.17
FIRRE-201ENST00000427391 NBPF10Q6P3W6 841 aaKnown RBP13.97□□□□□ -0.17
FIRRE-201ENST00000427391 NBPF15Q8N660 670 aa13.97□□□□□ -0.17
FIRRE-201ENST00000427391 TNS3Q68CZ2 1445 aa13.97□□□□□ -0.17
FIRRE-201ENST00000427391 A1BGP04217 495 aa13.97□□□□□ -0.17
FIRRE-201ENST00000427391 RFX5P48382 616 aaPredicted RBP13.97□□□□□ -0.17
FIRRE-201ENST00000427391 SLFNL1Q499Z3 407 aa13.97□□□□□ -0.17
FIRRE-201ENST00000427391 CREB3L3Q68CJ9 461 aa13.97□□□□□ -0.17
FIRRE-201ENST00000427391 HDAC5Q9UQL6 1122 aa13.97□□□□□ -0.17
FIRRE-201ENST00000427391 CADPS2Q86UW7 1296 aa13.97□□□□□ -0.17
FIRRE-201ENST00000427391 EPB41L2O43491 1005 aaKnown RBP13.96□□□□□ -0.17
FIRRE-201ENST00000427391 TOM1L2Q6ZVM7 507 aa13.96□□□□□ -0.17
FIRRE-201ENST00000427391 SEC62Q99442 399 aaKnown RBP13.96□□□□□ -0.17
FIRRE-201ENST00000427391 DNAJC2Q99543 621 aaKnown RBP13.96□□□□□ -0.17
FIRRE-201ENST00000427391 DBNDD2Q9BQY9 259 aa13.96□□□□□ -0.17
FIRRE-201ENST00000427391 PRDM11Q9NQV5 511 aa13.96□□□□□ -0.17
FIRRE-201ENST00000427391 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.96□□□□□ -0.171e-6■□□□□ 11.3
FIRRE-201ENST00000427391 SMC3Q9UQE7 1217 aa13.96□□□□□ -0.17
FIRRE-201ENST00000427391 WDR33Q9C0J8 1336 aaKnown RBP13.96□□□□□ -0.17
FIRRE-201ENST00000427391 ME3Q16798 604 aa13.96□□□□□ -0.18
FIRRE-201ENST00000427391 LMBR1LQ6UX01 489 aa13.96□□□□□ -0.18
FIRRE-201ENST00000427391 CCDC129Q6ZRS4 1044 aa13.96□□□□□ -0.18
FIRRE-201ENST00000427391 CYP46A1Q9Y6A2 500 aa13.96□□□□□ -0.18
FIRRE-201ENST00000427391 SLC27A2O14975 620 aa13.95□□□□□ -0.18
FIRRE-201ENST00000427391 GJB2P29033 226 aa13.95□□□□□ -0.18
FIRRE-201ENST00000427391 STX6O43752 255 aa13.95□□□□□ -0.18
FIRRE-201ENST00000427391 CLCN1P35523 988 aa13.95□□□□□ -0.18
FIRRE-201ENST00000427391 BRINP3Q76B58 766 aa13.95□□□□□ -0.18
FIRRE-201ENST00000427391 MAP4K1Q92918 833 aa13.95□□□□□ -0.18
FIRRE-201ENST00000427391 ZBTB3Q9H5J0 574 aa13.95□□□□□ -0.18
FIRRE-201ENST00000427391 ZSWIM6Q9HCJ5 1215 aa13.95□□□□□ -0.18
FIRRE-201ENST00000427391 TPCN1Q9ULQ1 816 aa13.95□□□□□ -0.18
FIRRE-201ENST00000427391 ZSCAN22P10073 491 aaPredicted RBP13.94□□□□□ -0.18
FIRRE-201ENST00000427391 PIP4K2BP78356 416 aa13.94□□□□□ -0.18
FIRRE-201ENST00000427391 TNNI3KQ59H18 835 aa13.94□□□□□ -0.18
FIRRE-201ENST00000427391 LRSAM1Q6UWE0 723 aa13.94□□□□□ -0.18
FIRRE-201ENST00000427391 ZNF330Q9Y3S2 320 aaPredicted RBP13.94□□□□□ -0.18
FIRRE-201ENST00000427391 FPGT-TNNI3KV9GXZ4 949 aa13.94□□□□□ -0.18
FIRRE-201ENST00000427391 COL15A1P39059 1388 aa13.94□□□□□ -0.18
FIRRE-201ENST00000427391 FIBPO43427 364 aa13.94□□□□□ -0.18
FIRRE-201ENST00000427391 STRN4Q9NRL3 753 aa13.94□□□□□ -0.18
FIRRE-201ENST00000427391 CCDC173Q0VFZ6 552 aa13.94□□□□□ -0.18
FIRRE-201ENST00000427391 DDX46Q7L014 1031 aaKnown RBP13.94□□□□□ -0.18
FIRRE-201ENST00000427391 PPP1R9BQ96SB3 815 aa13.94□□□□□ -0.18
FIRRE-201ENST00000427391 COPRSQ9NQ92 184 aa13.94□□□□□ -0.18
FIRRE-201ENST00000427391 ZKSCAN1P17029 563 aaPredicted RBP13.93□□□□□ -0.18
FIRRE-201ENST00000427391 ZNF594Q96JF6 807 aaPredicted RBP13.93□□□□□ -0.18
FIRRE-201ENST00000427391 VPS37CA5D8V6 355 aaPredicted RBP13.93□□□□□ -0.18
FIRRE-201ENST00000427391 MBD3O95983 291 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms