RNA–Protein interactions for RNA: ENST00000427076.5

POLR2J4-202, Transcript of RNA polymerase II subunit J4, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene POLR2J4, Length 6,466 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J4-202ENST00000427076 TMEM266Q2M3C6 531 aa13□□□□□ -0.33
POLR2J4-202ENST00000427076 TRIM68Q6AZZ1 485 aa13□□□□□ -0.33
POLR2J4-202ENST00000427076 BOLA2Q9H3K6 86 aa13□□□□□ -0.33
POLR2J4-202ENST00000427076 FRMD4BQ9Y2L6 1034 aa13□□□□□ -0.33
POLR2J4-202ENST00000427076 A0A1B0GUL7 405 aa13□□□□□ -0.33
POLR2J4-202ENST00000427076 PPP2R1AP30153 589 aa13□□□□□ -0.33
POLR2J4-202ENST00000427076 STX1AQ16623 288 aa13□□□□□ -0.33
POLR2J4-202ENST00000427076 GSTA5Q7RTV2 222 aa13□□□□□ -0.33
POLR2J4-202ENST00000427076 PCK1P35558 622 aa13□□□□□ -0.33
POLR2J4-202ENST00000427076 GSDMDP57764 484 aa13□□□□□ -0.33
POLR2J4-202ENST00000427076 SSRP1Q08945 709 aaKnown RBP13□□□□□ -0.33
POLR2J4-202ENST00000427076 MRRFQ96E11 262 aaKnown RBP13□□□□□ -0.33
POLR2J4-202ENST00000427076 CEP126Q9P2H0 1117 aa13□□□□□ -0.33
POLR2J4-202ENST00000427076 SH3BP5O60239 455 aa13□□□□□ -0.33
POLR2J4-202ENST00000427076 GTPBP4Q9BZE4 634 aaKnown RBP13□□□□□ -0.33
POLR2J4-202ENST00000427076 MROH2BQ7Z745 1585 aa13□□□□□ -0.33
POLR2J4-202ENST00000427076 ZC3H6P61129 1189 aaKnown RBP13□□□□□ -0.33
POLR2J4-202ENST00000427076 GIMAP6Q6P9H5 292 aa13□□□□□ -0.33
POLR2J4-202ENST00000427076 DNAI1Q9UI46 699 aa13□□□□□ -0.33
POLR2J4-202ENST00000427076 PDE3AQ14432 1141 aa12.99□□□□□ -0.33
POLR2J4-202ENST00000427076 TTC12Q9H892 705 aaPredicted RBP12.99□□□□□ -0.33
POLR2J4-202ENST00000427076 VAT1LQ9HCJ6 419 aa12.99□□□□□ -0.33
POLR2J4-202ENST00000427076 SYNCQ9H7C4 482 aa12.99□□□□□ -0.33
POLR2J4-202ENST00000427076 KCNK9Q9NPC2 374 aa12.99□□□□□ -0.33
POLR2J4-202ENST00000427076 ZPR1O75312 459 aa12.99□□□□□ -0.33
POLR2J4-202ENST00000427076 SEC62Q99442 399 aaKnown RBP12.99□□□□□ -0.33
POLR2J4-202ENST00000427076 SCAND2PQ9GZW5 306 aaPredicted RBP12.99□□□□□ -0.33
POLR2J4-202ENST00000427076 SLC12A7Q9Y666 1083 aa12.99□□□□□ -0.33
POLR2J4-202ENST00000427076 ZSCAN23Q3MJ62 389 aa12.99□□□□□ -0.33
POLR2J4-202ENST00000427076 TMEM57Q8N5G2 664 aa12.99□□□□□ -0.33
POLR2J4-202ENST00000427076 ATF7IPQ6VMQ6 1270 aa12.98□□□□□ -0.33
POLR2J4-202ENST00000427076 KARSQ15046 597 aaKnown RBP12.98□□□□□ -0.33
POLR2J4-202ENST00000427076 CTAGE15A4D2H0 777 aa12.98□□□□□ -0.33
POLR2J4-202ENST00000427076 CTAGE8P0CG41 777 aa12.98□□□□□ -0.33
POLR2J4-202ENST00000427076 CTAGE6Q86UF2 777 aa12.98□□□□□ -0.33
POLR2J4-202ENST00000427076 CTAGE4Q8IX94 777 aa12.98□□□□□ -0.33
POLR2J4-202ENST00000427076 KIF20AO95235 890 aa12.98□□□□□ -0.33
POLR2J4-202ENST00000427076 GCKP35557 465 aa12.98□□□□□ -0.33
POLR2J4-202ENST00000427076 SMC1BQ8NDV3 1235 aa12.98□□□□□ -0.33
POLR2J4-202ENST00000427076 PNISRQ8TF01 805 aaKnown RBP12.98□□□□□ -0.33
POLR2J4-202ENST00000427076 ARFGAP3Q9NP61 516 aa12.98□□□□□ -0.33
POLR2J4-202ENST00000427076 MIS18AQ9NYP9 233 aa12.98□□□□□ -0.33
POLR2J4-202ENST00000427076 CCDC194A0A1B0GVG4 234 aa12.98□□□□□ -0.33
POLR2J4-202ENST00000427076 WDHD1O75717 1129 aaPredicted RBP12.98□□□□□ -0.33
POLR2J4-202ENST00000427076 GJB2P29033 226 aa12.98□□□□□ -0.33
POLR2J4-202ENST00000427076 PSMD6Q15008 389 aa12.98□□□□□ -0.33
POLR2J4-202ENST00000427076 C17orf53Q8N3J3 647 aaPredicted RBP12.98□□□□□ -0.33
POLR2J4-202ENST00000427076 GOLGA8BA8MQT2 603 aa12.97□□□□□ -0.33
POLR2J4-202ENST00000427076 ARID5AQ03989 594 aa12.97□□□□□ -0.33
POLR2J4-202ENST00000427076 NOLC1Q14978 699 aaKnown RBP eCLIP12.97□□□□□ -0.33
POLR2J4-202ENST00000427076 METTL24Q5JXM2 366 aa12.97□□□□□ -0.33
POLR2J4-202ENST00000427076 DPH6Q7L8W6 267 aa12.97□□□□□ -0.33
POLR2J4-202ENST00000427076 CUL5Q93034 780 aa12.97□□□□□ -0.33
POLR2J4-202ENST00000427076 BICD1Q96G01 975 aa12.97□□□□□ -0.33
POLR2J4-202ENST00000427076 MRFAP1L1Q96HT8 127 aa12.97□□□□□ -0.33
POLR2J4-202ENST00000427076 PAXBP1Q9Y5B6 917 aa12.97□□□□□ -0.33
POLR2J4-202ENST00000427076 GOLGA8AA7E2F4 631 aa12.97□□□□□ -0.33
POLR2J4-202ENST00000427076 CETN1Q12798 172 aa12.97□□□□□ -0.33
POLR2J4-202ENST00000427076 IFT81Q8WYA0 676 aa12.97□□□□□ -0.33
POLR2J4-202ENST00000427076 NEMFO60524 1076 aa12.97□□□□□ -0.33
POLR2J4-202ENST00000427076 ZFYP08048 801 aaPredicted RBP12.97□□□□□ -0.33
POLR2J4-202ENST00000427076 CCDC129Q6ZRS4 1044 aa12.97□□□□□ -0.33
POLR2J4-202ENST00000427076 CPLX4Q7Z7G2 160 aa12.97□□□□□ -0.33
POLR2J4-202ENST00000427076 RPAINQ86UA6 219 aa12.97□□□□□ -0.33
POLR2J4-202ENST00000427076 FERMT1Q9BQL6 677 aa12.97□□□□□ -0.33
POLR2J4-202ENST00000427076 SAMM50Q9Y512 469 aa12.97□□□□□ -0.33
POLR2J4-202ENST00000427076 TLDC2A0PJX2 215 aa12.97□□□□□ -0.33
POLR2J4-202ENST00000427076 VPS41P49754 854 aa12.97□□□□□ -0.33
POLR2J4-202ENST00000427076 U3KPZ7 1027 aaPredicted RBP12.97□□□□□ -0.33
POLR2J4-202ENST00000427076 AKR1B10O60218 316 aa12.97□□□□□ -0.33
POLR2J4-202ENST00000427076 ATICP31939 592 aa12.97□□□□□ -0.33
POLR2J4-202ENST00000427076 HPDP32754 393 aaPredicted RBP12.97□□□□□ -0.33
POLR2J4-202ENST00000427076 CCDC25Q86WR0 208 aa12.97□□□□□ -0.33
POLR2J4-202ENST00000427076 MRFAP1Q9Y605 127 aa12.97□□□□□ -0.33
POLR2J4-202ENST00000427076 CCDC171Q6TFL3 1326 aa12.97□□□□□ -0.33
POLR2J4-202ENST00000427076 TXNDC9O14530 226 aa12.96□□□□□ -0.33
POLR2J4-202ENST00000427076 CEP85LQ5SZL2 805 aa12.96□□□□□ -0.33
POLR2J4-202ENST00000427076 NAPBQ9H115 298 aa12.96□□□□□ -0.33
POLR2J4-202ENST00000427076 N4BP3O15049 544 aa12.96□□□□□ -0.33
POLR2J4-202ENST00000427076 CTCFLQ8NI51 663 aaPredicted RBP12.96□□□□□ -0.33
POLR2J4-202ENST00000427076 TRIM47Q96LD4 638 aa12.96□□□□□ -0.33
POLR2J4-202ENST00000427076 RRBP1Q9P2E9 1410 aaKnown RBP12.96□□□□□ -0.33
POLR2J4-202ENST00000427076 FYCO1Q9BQS8 1478 aa12.96□□□□□ -0.33
POLR2J4-202ENST00000427076 CCDC50Q8IVM0 306 aa12.96□□□□□ -0.33
POLR2J4-202ENST00000427076 PLEKHA4Q9H4M7 779 aa12.96□□□□□ -0.33
POLR2J4-202ENST00000427076 CTAGE5O15320 804 aa12.96□□□□□ -0.34
POLR2J4-202ENST00000427076 AFMP43652 599 aa12.96□□□□□ -0.34
POLR2J4-202ENST00000427076 WDR63Q8IWG1 891 aa12.96□□□□□ -0.34
POLR2J4-202ENST00000427076 CALML4Q96GE6 196 aa12.96□□□□□ -0.34
POLR2J4-202ENST00000427076 RAB11FIP3O75154 756 aa12.95□□□□□ -0.34
POLR2J4-202ENST00000427076 HCLS1P14317 486 aaPredicted RBP12.95□□□□□ -0.34
POLR2J4-202ENST00000427076 RRS1Q15050 365 aaKnown RBP12.95□□□□□ -0.34
POLR2J4-202ENST00000427076 CAVIN4Q5BKX8 364 aa12.95□□□□□ -0.34
POLR2J4-202ENST00000427076 EPSTI1Q96J88 318 aa12.95□□□□□ -0.34
POLR2J4-202ENST00000427076 RAB34Q9BZG1 259 aa12.95□□□□□ -0.34
POLR2J4-202ENST00000427076 ZNF644Q9H582 1327 aaPredicted RBP12.95□□□□□ -0.34
POLR2J4-202ENST00000427076 OPA1O60313 960 aa12.95□□□□□ -0.34
POLR2J4-202ENST00000427076 ZNF165P49910 485 aa12.95□□□□□ -0.34
POLR2J4-202ENST00000427076 CEP128Q6ZU80 1094 aa12.95□□□□□ -0.34
POLR2J4-202ENST00000427076 TSC1Q92574 1164 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms